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The map label for this gene is dppB [H]

Identifier: 146338011

GI number: 146338011

Start: 965009

End: 965962

Strand: Direct

Name: dppB [H]

Synonym: BRADO0904

Alternate gene names: 146338011

Gene position: 965009-965962 (Clockwise)

Preceding gene: 146338010

Following gene: 146338012

Centisome position: 12.94

GC content: 66.46

Gene sequence:

>954_bases
GTGCTCTCTTATGCTGCCAGGCGGATGGTCTATGCGATTCCGATCATCATCGGCGTCGCGCTGGTCTGCTTCATGCTGGT
TCACATCACGCCCGGCGATCCGCTCGTCGCGGTGCTGCCGGCCGACGCGTCGCAGGAGCTGGCGCAGCAGCTGCGCGTGG
CCTATGGCTTCGACAAGCCGTTGCCGGTGCAGTTCGGGCTGTGGCTGTGGCGCGCGGTCAATGGCGATCTCGGCAGCTCG
ATCGCGACCGGCCGTCCCGTGCTCGCTGAAGTCCTGCGCGCTGTCGCCAACACCGTGACGCTGGCGATTGCGGCGGCCAT
CATCGGCTTCTCGCTCGGCCTGTTCTTCGGCCTCGTCGCCGGCTACTTCCGCGACACCTGGGTCGACAAGGTCGCGACCT
CGATCGCGATCGCCGGCGTGTCGCTGCCGCATTACTGGCTCGGCATGGTGCTGGTCATCATCTTCTCGGTCGAGCTGAAC
TGGCTGCCTGCGGTCGGCGCTGGTCCGTCCGGCTCGGGCGCCTGGGCGTGGGACTGGGCGCATTTGCGATTCCTCATCCT
GCCGGCGATCACCACGTCGGTCATTCCGATGGGCATCGTCACCCGCACGGTCCGCGCGCTGACCGGCGACATCTTGAGCC
AGGATTTCGTCGAGGCGTTGCGTGCGAAAGGACTGCGCGAGCGCCAAGTGTTCCGCCATGTGCTGAAGAACGCTGCGCCT
ACGGCGCTCGCAGTGATGGGCCTGCAGCTCGGCTACATGCTCGGCGGCTCGATCCTGATCGAGACGGTGTTCTCCTGGCC
CGGCTCGGGCCTGCTGCTGAACTCCGCCATCTTCCAGCGCGACCTGCCGCTGCTGCAGGGGACGATCCTGGTGCTGGCGA
TGTTCTTCGTCATCCTCAACCTCGTGGTCGACATCGCGCAGGCCGCGATCGATCCGCGCATCAAGCGGGGCTAG

Upstream 100 bases:

>100_bases
GGCTTGACCCGGCCATCCATCTTTGACCCGTGGAGGAGACCGCGTGGATGCCCGGGTCAAGCCCGGGCATGACGACCGAT
AGACCCTCAAAAGGTGACTC

Downstream 100 bases:

>100_bases
CGATGAGCGTGAGTTCCCCGAGCGCGATCAACGAGGCTTCGCTGCAGTCCGCGCCGGCCGCGAAGGCGCGCGGCTATTGG
GCGACCGTCGGCCGTCGCAT

Product: putative oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLSYAARRMVYAIPIIIGVALVCFMLVHITPGDPLVAVLPADASQELAQQLRVAYGFDKPLPVQFGLWLWRAVNGDLGSS
IATGRPVLAEVLRAVANTVTLAIAAAIIGFSLGLFFGLVAGYFRDTWVDKVATSIAIAGVSLPHYWLGMVLVIIFSVELN
WLPAVGAGPSGSGAWAWDWAHLRFLILPAITTSVIPMGIVTRTVRALTGDILSQDFVEALRAKGLRERQVFRHVLKNAAP
TALAVMGLQLGYMLGGSILIETVFSWPGSGLLLNSAIFQRDLPLLQGTILVLAMFFVILNLVVDIAQAAIDPRIKRG

Sequences:

>Translated_317_residues
MLSYAARRMVYAIPIIIGVALVCFMLVHITPGDPLVAVLPADASQELAQQLRVAYGFDKPLPVQFGLWLWRAVNGDLGSS
IATGRPVLAEVLRAVANTVTLAIAAAIIGFSLGLFFGLVAGYFRDTWVDKVATSIAIAGVSLPHYWLGMVLVIIFSVELN
WLPAVGAGPSGSGAWAWDWAHLRFLILPAITTSVIPMGIVTRTVRALTGDILSQDFVEALRAKGLRERQVFRHVLKNAAP
TALAVMGLQLGYMLGGSILIETVFSWPGSGLLLNSAIFQRDLPLLQGTILVLAMFFVILNLVVDIAQAAIDPRIKRG
>Mature_317_residues
MLSYAARRMVYAIPIIIGVALVCFMLVHITPGDPLVAVLPADASQELAQQLRVAYGFDKPLPVQFGLWLWRAVNGDLGSS
IATGRPVLAEVLRAVANTVTLAIAAAIIGFSLGLFFGLVAGYFRDTWVDKVATSIAIAGVSLPHYWLGMVLVIIFSVELN
WLPAVGAGPSGSGAWAWDWAHLRFLILPAITTSVIPMGIVTRTVRALTGDILSQDFVEALRAKGLRERQVFRHVLKNAAP
TALAVMGLQLGYMLGGSILIETVFSWPGSGLLLNSAIFQRDLPLLQGTILVLAMFFVILNLVVDIAQAAIDPRIKRG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=316, Percent_Identity=37.9746835443038, Blast_Score=221, Evalue=3e-59,
Organism=Escherichia coli, GI1789888, Length=320, Percent_Identity=37.1875, Blast_Score=214, Evalue=7e-57,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=34.3195266272189, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1787761, Length=323, Percent_Identity=34.984520123839, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1787497, Length=319, Percent_Identity=28.2131661442006, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=32.3308270676692, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=23.7569060773481, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34109; Mature: 34109

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYAARRMVYAIPIIIGVALVCFMLVHITPGDPLVAVLPADASQELAQQLRVAYGFDKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
LPVQFGLWLWRAVNGDLGSSIATGRPVLAEVLRAVANTVTLAIAAAIIGFSLGLFFGLVA
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYFRDTWVDKVATSIAIAGVSLPHYWLGMVLVIIFSVELNWLPAVGAGPSGSGAWAWDWA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHH
HLRFLILPAITTSVIPMGIVTRTVRALTGDILSQDFVEALRAKGLRERQVFRHVLKNAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
TALAVMGLQLGYMLGGSILIETVFSWPGSGLLLNSAIFQRDLPLLQGTILVLAMFFVILN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVVDIAQAAIDPRIKRG
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLSYAARRMVYAIPIIIGVALVCFMLVHITPGDPLVAVLPADASQELAQQLRVAYGFDKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
LPVQFGLWLWRAVNGDLGSSIATGRPVLAEVLRAVANTVTLAIAAAIIGFSLGLFFGLVA
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYFRDTWVDKVATSIAIAGVSLPHYWLGMVLVIIFSVELNWLPAVGAGPSGSGAWAWDWA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHH
HLRFLILPAITTSVIPMGIVTRTVRALTGDILSQDFVEALRAKGLRERQVFRHVLKNAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
TALAVMGLQLGYMLGGSILIETVFSWPGSGLLLNSAIFQRDLPLLQGTILVLAMFFVILN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVVDIAQAAIDPRIKRG
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]