| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is b2999 [C]
Identifier: 146338002
GI number: 146338002
Start: 945898
End: 947142
Strand: Reverse
Name: b2999 [C]
Synonym: BRADO0895
Alternate gene names: 146338002
Gene position: 947142-945898 (Counterclockwise)
Preceding gene: 146338004
Following gene: 146338001
Centisome position: 12.7
GC content: 65.22
Gene sequence:
>1245_bases ATGGCTGGCAAAAGCGCTGGACAGTGGATCGACATCGCCGCCGCCGATGGCGGCACGTTCAAGGGCTACCTCGCGGTGCC CGCGTCGGGCTCCGGTCCCGGCATCGTGCTCCTGCAGGAAATCTTCGGCGTCAACGCATCGATGCGGGACGTTGCCGACT ACTACGCCGAGGAAGGCTATGTCGTGCTCGCGCCGGACCTGTTCTGGCGCTTCGAGCCGGGTATCGAGCTCGGCTATGGC GAGGCCGACTTCGGCAAGGCCTTCGGCTACTACCAGCGCTTCGACGTGAATCTCGCGATCAAGGACACGGCCGACGCGCT GAAGGTGCTGCGCGCCCGTCCCGAATGCAAGGGCAAGGTCGGTGCGCTCGGCTTCTGCCTCGGCGGCAAGCTCGCCTACC TCACCGCCGCCCGCACCGATGTCGATTGCGCCGTGTCCTATTATGGCGTCGGCATCGAGGCCGATATCGCGGAAGCCAAG AACATCAAGGGCCCGATCGTCTTCCACTTCGCCGAGCTCGACAAGTTCGCGCCTGCCGAGGCGCGCGAGGCGATCAAGGC CGGCTTTGCCGGCCGCGACGACGCCGAGTTCTATCTCTACCCCGGCTGTGATCACGCCTTCGCCGCGCCCGAGCGCGCCA GCTTCGACAAGCCCGCGACCCTGATGGCGCATTCGCGCTCGATCGCCCTGTTCCGGAAGGTTCTGGGCCCGCATTACGAT CTGTCGTCGTTGTGGGACAAGCACACCGAGCTCGAATTCGCCACCCGCTCGGCCGAGGCGACGATGGGCACGATGGTCGC CGAGCCCTATGTCAACCACATCCCGACCATGACCGGCGGCGTCGGCTACAAGGACCTGCTGCGGTTCTACGCCAACCACT TCATCCCGAAGACGCCCGCGGATACCAAGCTGGTGCCGATCTCGCGCACCATCGGCGCCGACCGCGTCGTCGACGAAATG CTGTTCTGCTTCACCCACGACATCGAGATCGACTGGATGCTGCCGGGCATCCCGCCGACCGGCAAATATGTCGAGATCCC GCTGGTCGCGATCGTGCGCTTCCGCGGCGACAAGCTCTACAACGAGCACATCTACTGGGATCAGGCCTCGGTGCTGGTGC AGATCGGCCTGCTCGATCCGTCCAAGCTGCCGGTCGCAGGTGTCGAGACCGCCAAGAAGCTGGTCGATGAAAGCCTGCCC TCGAACACGCTGATGAAGCGCTGGGCCGAGAGCGCGCCGCACTGA
Upstream 100 bases:
>100_bases CTACTGTTTACATCCGACATTTTTACATTAAAAATTCAATGAAGAAAACACATGAGGCCCGGCGTCACTGTGGACGCTGG CAGGACCGGGGAGCATGACG
Downstream 100 bases:
>100_bases TCATCAGGCGGGGATGGGGCCGGCAGGGGCGCCATTCCCCAATCTGTCATTTGCTCACTCATCGTTCGCTCATTTGGAGT TGCATCACCATGCGTGACCA
Product: putative carboxymethylenebutenolidase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MAGKSAGQWIDIAAADGGTFKGYLAVPASGSGPGIVLLQEIFGVNASMRDVADYYAEEGYVVLAPDLFWRFEPGIELGYG EADFGKAFGYYQRFDVNLAIKDTADALKVLRARPECKGKVGALGFCLGGKLAYLTAARTDVDCAVSYYGVGIEADIAEAK NIKGPIVFHFAELDKFAPAEAREAIKAGFAGRDDAEFYLYPGCDHAFAAPERASFDKPATLMAHSRSIALFRKVLGPHYD LSSLWDKHTELEFATRSAEATMGTMVAEPYVNHIPTMTGGVGYKDLLRFYANHFIPKTPADTKLVPISRTIGADRVVDEM LFCFTHDIEIDWMLPGIPPTGKYVEIPLVAIVRFRGDKLYNEHIYWDQASVLVQIGLLDPSKLPVAGVETAKKLVDESLP SNTLMKRWAESAPH
Sequences:
>Translated_414_residues MAGKSAGQWIDIAAADGGTFKGYLAVPASGSGPGIVLLQEIFGVNASMRDVADYYAEEGYVVLAPDLFWRFEPGIELGYG EADFGKAFGYYQRFDVNLAIKDTADALKVLRARPECKGKVGALGFCLGGKLAYLTAARTDVDCAVSYYGVGIEADIAEAK NIKGPIVFHFAELDKFAPAEAREAIKAGFAGRDDAEFYLYPGCDHAFAAPERASFDKPATLMAHSRSIALFRKVLGPHYD LSSLWDKHTELEFATRSAEATMGTMVAEPYVNHIPTMTGGVGYKDLLRFYANHFIPKTPADTKLVPISRTIGADRVVDEM LFCFTHDIEIDWMLPGIPPTGKYVEIPLVAIVRFRGDKLYNEHIYWDQASVLVQIGLLDPSKLPVAGVETAKKLVDESLP SNTLMKRWAESAPH >Mature_413_residues AGKSAGQWIDIAAADGGTFKGYLAVPASGSGPGIVLLQEIFGVNASMRDVADYYAEEGYVVLAPDLFWRFEPGIELGYGE ADFGKAFGYYQRFDVNLAIKDTADALKVLRARPECKGKVGALGFCLGGKLAYLTAARTDVDCAVSYYGVGIEADIAEAKN IKGPIVFHFAELDKFAPAEAREAIKAGFAGRDDAEFYLYPGCDHAFAAPERASFDKPATLMAHSRSIALFRKVLGPHYDL SSLWDKHTELEFATRSAEATMGTMVAEPYVNHIPTMTGGVGYKDLLRFYANHFIPKTPADTKLVPISRTIGADRVVDEML FCFTHDIEIDWMLPGIPPTGKYVEIPLVAIVRFRGDKLYNEHIYWDQASVLVQIGLLDPSKLPVAGVETAKKLVDESLPS NTLMKRWAESAPH
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 45282; Mature: 45151
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKSAGQWIDIAAADGGTFKGYLAVPASGSGPGIVLLQEIFGVNASMRDVADYYAEEGY CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHCCCCCHHHHHHHHHCCCE VVLAPDLFWRFEPGIELGYGEADFGKAFGYYQRFDVNLAIKDTADALKVLRARPECKGKV EEECCCEEEEECCCCEECCCCCHHHHHHCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCC GALGFCLGGKLAYLTAARTDVDCAVSYYGVGIEADIAEAKNIKGPIVFHFAELDKFAPAE CEEEEECCCCEEEEEECCCCCCEEEEEECCCEEECHHHHCCCCCCEEEEEEHHHHCCCHH AREAIKAGFAGRDDAEFYLYPGCDHAFAAPERASFDKPATLMAHSRSIALFRKVLGPHYD HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCC LSSLWDKHTELEFATRSAEATMGTMVAEPYVNHIPTMTGGVGYKDLLRFYANHFIPKTPA HHHHHHHHCCHHHHHCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC DTKLVPISRTIGADRVVDEMLFCFTHDIEIDWMLPGIPPTGKYVEIPLVAIVRFRGDKLY CCEEEEEHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEHHEEEEEECCCEEE NEHIYWDQASVLVQIGLLDPSKLPVAGVETAKKLVDESLPSNTLMKRWAESAPH CCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure AGKSAGQWIDIAAADGGTFKGYLAVPASGSGPGIVLLQEIFGVNASMRDVADYYAEEGY CCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHCCCCCHHHHHHHHHCCCE VVLAPDLFWRFEPGIELGYGEADFGKAFGYYQRFDVNLAIKDTADALKVLRARPECKGKV EEECCCEEEEECCCCEECCCCCHHHHHHCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCC GALGFCLGGKLAYLTAARTDVDCAVSYYGVGIEADIAEAKNIKGPIVFHFAELDKFAPAE CEEEEECCCCEEEEEECCCCCCEEEEEECCCEEECHHHHCCCCCCEEEEEEHHHHCCCHH AREAIKAGFAGRDDAEFYLYPGCDHAFAAPERASFDKPATLMAHSRSIALFRKVLGPHYD HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCC LSSLWDKHTELEFATRSAEATMGTMVAEPYVNHIPTMTGGVGYKDLLRFYANHFIPKTPA HHHHHHHHCCHHHHHCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC DTKLVPISRTIGADRVVDEMLFCFTHDIEIDWMLPGIPPTGKYVEIPLVAIVRFRGDKLY CCEEEEEHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEHHEEEEEECCCEEE NEHIYWDQASVLVQIGLLDPSKLPVAGVETAKKLVDESLPSNTLMKRWAESAPH CCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8138139 [H]