Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146337991

Identifier: 146337991

GI number: 146337991

Start: 934137

End: 934589

Strand: Reverse

Name: 146337991

Synonym: BRADO0883

Alternate gene names: NA

Gene position: 934589-934137 (Counterclockwise)

Preceding gene: 146337993

Following gene: 146337989

Centisome position: 12.53

GC content: 65.78

Gene sequence:

>453_bases
ATGTCGCCGTCCTTGATCGAAACCGCCAACCTCGCCGTCGACCTGGCGCCGGCCCCGATCGAGCCGTCGTGGATCATCGA
GGGCAATCCGACTGCGACCTCCTGCACCATCGCCCGCAGCAGCGACGGCCTCGGCTCGACCATCGTCTGGCGCTGCACCG
AGGGCAAGTTCAACTGGTACTACGATTTCGACGAGACGATCCTGATCCTCGAGGGCGCGATCGTTCTGGAGAGCGACGGG
CTCCCGGCAAAGCGTTATGGGCCGGGCGACGTGATCTTCTTCCGCGACGGCGCGCATGCCAAATGGGCCGTCGAGGGCCA
CGTCAAGAAGCTCGCCTTCTGCCTGAAGACGCAGCCTTACGTGCTTGGCCTCGCGGTGCGCGTGATCAACAAGCTCAAGC
GCATGTTCGTCACGCCCGACGGCCGCCGCGGAGCCAGCCTGGCCGGCGCATAG

Upstream 100 bases:

>100_bases
AACGATCGGGGAAAGCGCCGGTCAGGCCCGTCCGGCTACGGTTGCAGGCTCATGCCGGCACCCGTCCGGTCATTTCAATC
CGATGCATTTGAGGTCCATG

Downstream 100 bases:

>100_bases
AGCTACACGCCGTCGAGAATGATCACGGTCGGACTCGACGGCAGCAGCTCGCGCGACATCTTCAAGGACCGCTCGGTGCG
GCGGTCGATCTCGAACTGCT

Product: putative RmlC-like cupin family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWYYDFDETILILEGAIVLESDG
LPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPYVLGLAVRVINKLKRMFVTPDGRRGASLAGA

Sequences:

>Translated_150_residues
MSPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWYYDFDETILILEGAIVLESDG
LPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPYVLGLAVRVINKLKRMFVTPDGRRGASLAGA
>Mature_149_residues
SPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWYYDFDETILILEGAIVLESDGL
PAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPYVLGLAVRVINKLKRMFVTPDGRRGASLAGA

Specific function: Unknown

COG id: COG3450

COG function: function code R; Predicted enzyme of the cupin superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16282; Mature: 16151

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWY
CCCCCEEECCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCEEEE
YDFDETILILEGAIVLESDGLPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPY
EECCCEEEEEECEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCH
VLGLAVRVINKLKRMFVTPDGRRGASLAGA
HHHHHHHHHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
SPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWY
CCCCEEECCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCEEEE
YDFDETILILEGAIVLESDGLPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPY
EECCCEEEEEECEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCH
VLGLAVRVINKLKRMFVTPDGRRGASLAGA
HHHHHHHHHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA