| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337991
Identifier: 146337991
GI number: 146337991
Start: 934137
End: 934589
Strand: Reverse
Name: 146337991
Synonym: BRADO0883
Alternate gene names: NA
Gene position: 934589-934137 (Counterclockwise)
Preceding gene: 146337993
Following gene: 146337989
Centisome position: 12.53
GC content: 65.78
Gene sequence:
>453_bases ATGTCGCCGTCCTTGATCGAAACCGCCAACCTCGCCGTCGACCTGGCGCCGGCCCCGATCGAGCCGTCGTGGATCATCGA GGGCAATCCGACTGCGACCTCCTGCACCATCGCCCGCAGCAGCGACGGCCTCGGCTCGACCATCGTCTGGCGCTGCACCG AGGGCAAGTTCAACTGGTACTACGATTTCGACGAGACGATCCTGATCCTCGAGGGCGCGATCGTTCTGGAGAGCGACGGG CTCCCGGCAAAGCGTTATGGGCCGGGCGACGTGATCTTCTTCCGCGACGGCGCGCATGCCAAATGGGCCGTCGAGGGCCA CGTCAAGAAGCTCGCCTTCTGCCTGAAGACGCAGCCTTACGTGCTTGGCCTCGCGGTGCGCGTGATCAACAAGCTCAAGC GCATGTTCGTCACGCCCGACGGCCGCCGCGGAGCCAGCCTGGCCGGCGCATAG
Upstream 100 bases:
>100_bases AACGATCGGGGAAAGCGCCGGTCAGGCCCGTCCGGCTACGGTTGCAGGCTCATGCCGGCACCCGTCCGGTCATTTCAATC CGATGCATTTGAGGTCCATG
Downstream 100 bases:
>100_bases AGCTACACGCCGTCGAGAATGATCACGGTCGGACTCGACGGCAGCAGCTCGCGCGACATCTTCAAGGACCGCTCGGTGCG GCGGTCGATCTCGAACTGCT
Product: putative RmlC-like cupin family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWYYDFDETILILEGAIVLESDG LPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPYVLGLAVRVINKLKRMFVTPDGRRGASLAGA
Sequences:
>Translated_150_residues MSPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWYYDFDETILILEGAIVLESDG LPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPYVLGLAVRVINKLKRMFVTPDGRRGASLAGA >Mature_149_residues SPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWYYDFDETILILEGAIVLESDGL PAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPYVLGLAVRVINKLKRMFVTPDGRRGASLAGA
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16282; Mature: 16151
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWY CCCCCEEECCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCEEEE YDFDETILILEGAIVLESDGLPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPY EECCCEEEEEECEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCH VLGLAVRVINKLKRMFVTPDGRRGASLAGA HHHHHHHHHHHHHHHEECCCCCCCCCCCCC >Mature Secondary Structure SPSLIETANLAVDLAPAPIEPSWIIEGNPTATSCTIARSSDGLGSTIVWRCTEGKFNWY CCCCEEECCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCEEEE YDFDETILILEGAIVLESDGLPAKRYGPGDVIFFRDGAHAKWAVEGHVKKLAFCLKTQPY EECCCEEEEEECEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHCCCCH VLGLAVRVINKLKRMFVTPDGRRGASLAGA HHHHHHHHHHHHHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA