| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337993
Identifier: 146337993
GI number: 146337993
Start: 935466
End: 936722
Strand: Reverse
Name: 146337993
Synonym: BRADO0885
Alternate gene names: NA
Gene position: 936722-935466 (Counterclockwise)
Preceding gene: 146337995
Following gene: 146337991
Centisome position: 12.56
GC content: 66.27
Gene sequence:
>1257_bases ATGACAGCACATTTCAGCAGCTTCGAGACCGCCATCGATCCCGTGAAGCTCGACCGTCTCGCCGAGGTGGCGGTGAGGGT CGGGCTGCAGTTGCAGCCGGGGCAGGATCTGCTGCTGACGGCGCCGTCGGTAGCGCTGCCGTTGGTGCGCAAGGTCGCCG AACACGCCTACAAGGCGGGCGCGGGGATCGTGACCTCGTTCTTCTCCGACGAGGAGCTCACGCTCGCGCGCTATCGCTAC GGCCACGACGAGAGCTTCGACCGCGCCGCCGACTGGCTGTATCAGGGCATGGCCAAGGCGTTCTCCGAGAACACCGCGCG GCTCGCCATCGTCGGCGACAATCCGATGCTGCTGTCCGGCCAGGATCCGGCCAAGGTGGCGCGCGCCAGCAAGGCGAACT CCAAGGCCTATCAGCCGGCGCTCGAGAAGATCACCAATTTCGAAACCAACTGGAACATCATCGCCTATCCCAGCGCGGCC TGGGCGAAGCTGGTCTTCCCTGACGTCCCCGAGGAGGTCGCGGTGGCCAAGCTCGCCGATGCCATCTTCGCGGCGTCGCG CGTCGATCGCGAGGACGCGGTATCGGCCTGGGCGAAACACAATGCCGTGCTGCGCGAGCGCACCGAGTGGCTCAACGGCC AGCGCTTCAGCGCGCTGCATTATACCGGCCCCGGCATGGACCTGACGATCGGCCTCGCCGACGGCCACGAATGGGAAGGC GGCGCCTCGACCGCCAAGAACGGCATCGTCTGCAACGCCAACATCCCGACCGAGGAGGTGTTCACGACGCCGCATTGCCG TCGCGTGTCCGGGCACGTCAGAAGCTCGAAGCCGCTGTCCTATCAGGGCACGCTGATCGACAACATCCAGGTCAAGTTCG AAGAGGGCCGCATCGTCGAGGCCAAGGCCTCGAAGGGCGAGGAGGTGCTGAACAAGGTGCTCGACACCGACGAGGGCGCG CGCCGCCTCGGAGAGGTGGCGCTGGTGCCGCACTCCTCGCCGATCTCCAAGAGCGGGCTGTTGTTCTACAACACGCTGTT CGACGAGAACGCCGCCTCGCATATCGCGCTCGGCCAATGCTACTCGAAGTGCTTCGTCAACGGCACCTCGCTGTCGCCGC AGCAGATCGCCGCCCAAGGCGGCAACCAGAGCCTGATCCACATCGACTGGATGATCGGCGCGGCGGAGACCAACATCGAC GGCCTGCACGAGGACGGCCGCCGCGTGCCGGTGTTCCGCAACGGCGAGTGGGCCTGA
Upstream 100 bases:
>100_bases GGGATGACGGCGGAGAGCGTAGCCGCGCCTTCGCCATTGACCGCCCCATCCATTGGCCTATCTCTTCAGCATCCACAAGC AACGGAACTGGACACCGCCG
Downstream 100 bases:
>100_bases AACATGAAGGGCCGGAGCACGATCTGCTCCGGCCCTCTTGTCATTGCAATGTCCCGTGGCGGGGTTCGCCGCAGTGCTTC CGACTTATGGCGACTTCGCC
Product: peptidase M29, aminopeptidase II
Products: NA
Alternate protein names: AP-T; Heat-stable aminopeptidase [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTAHFSSFETAIDPVKLDRLAEVAVRVGLQLQPGQDLLLTAPSVALPLVRKVAEHAYKAGAGIVTSFFSDEELTLARYRY GHDESFDRAADWLYQGMAKAFSENTARLAIVGDNPMLLSGQDPAKVARASKANSKAYQPALEKITNFETNWNIIAYPSAA WAKLVFPDVPEEVAVAKLADAIFAASRVDREDAVSAWAKHNAVLRERTEWLNGQRFSALHYTGPGMDLTIGLADGHEWEG GASTAKNGIVCNANIPTEEVFTTPHCRRVSGHVRSSKPLSYQGTLIDNIQVKFEEGRIVEAKASKGEEVLNKVLDTDEGA RRLGEVALVPHSSPISKSGLLFYNTLFDENAASHIALGQCYSKCFVNGTSLSPQQIAAQGGNQSLIHIDWMIGAAETNID GLHEDGRRVPVFRNGEWA
Sequences:
>Translated_418_residues MTAHFSSFETAIDPVKLDRLAEVAVRVGLQLQPGQDLLLTAPSVALPLVRKVAEHAYKAGAGIVTSFFSDEELTLARYRY GHDESFDRAADWLYQGMAKAFSENTARLAIVGDNPMLLSGQDPAKVARASKANSKAYQPALEKITNFETNWNIIAYPSAA WAKLVFPDVPEEVAVAKLADAIFAASRVDREDAVSAWAKHNAVLRERTEWLNGQRFSALHYTGPGMDLTIGLADGHEWEG GASTAKNGIVCNANIPTEEVFTTPHCRRVSGHVRSSKPLSYQGTLIDNIQVKFEEGRIVEAKASKGEEVLNKVLDTDEGA RRLGEVALVPHSSPISKSGLLFYNTLFDENAASHIALGQCYSKCFVNGTSLSPQQIAAQGGNQSLIHIDWMIGAAETNID GLHEDGRRVPVFRNGEWA >Mature_417_residues TAHFSSFETAIDPVKLDRLAEVAVRVGLQLQPGQDLLLTAPSVALPLVRKVAEHAYKAGAGIVTSFFSDEELTLARYRYG HDESFDRAADWLYQGMAKAFSENTARLAIVGDNPMLLSGQDPAKVARASKANSKAYQPALEKITNFETNWNIIAYPSAAW AKLVFPDVPEEVAVAKLADAIFAASRVDREDAVSAWAKHNAVLRERTEWLNGQRFSALHYTGPGMDLTIGLADGHEWEGG ASTAKNGIVCNANIPTEEVFTTPHCRRVSGHVRSSKPLSYQGTLIDNIQVKFEEGRIVEAKASKGEEVLNKVLDTDEGAR RLGEVALVPHSSPISKSGLLFYNTLFDENAASHIALGQCYSKCFVNGTSLSPQQIAAQGGNQSLIHIDWMIGAAETNIDG LHEDGRRVPVFRNGEWA
Specific function: Metal-dependent exopeptidase [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 45532; Mature: 45400
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHFSSFETAIDPVKLDRLAEVAVRVGLQLQPGQDLLLTAPSVALPLVRKVAEHAYKAG CCCCCCCHHHHCCHHHHHHHHHHHHHHCCEECCCCCEEEECCHHHHHHHHHHHHHHHHCC AGIVTSFFSDEELTLARYRYGHDESFDRAADWLYQGMAKAFSENTARLAIVGDNPMLLSG CCCEEHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECC QDPAKVARASKANSKAYQPALEKITNFETNWNIIAYPSAAWAKLVFPDVPEEVAVAKLAD CCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHEEECCCCCHHHHHHHHHH AIFAASRVDREDAVSAWAKHNAVLRERTEWLNGQRFSALHYTGPGMDLTIGLADGHEWEG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCC GASTAKNGIVCNANIPTEEVFTTPHCRRVSGHVRSSKPLSYQGTLIDNIQVKFEEGRIVE CCCCCCCCEEEECCCCHHHHCCCCCHHHHCCCCCCCCCCEECCEEEEEEEEEEECCEEEE AKASKGEEVLNKVLDTDEGARRLGEVALVPHSSPISKSGLLFYNTLFDENAASHIALGQC ECCCCCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEHHCCCCCCHHHHHHH YSKCFVNGTSLSPQQIAAQGGNQSLIHIDWMIGAAETNIDGLHEDGRRVPVFRNGEWA HHHHHCCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure TAHFSSFETAIDPVKLDRLAEVAVRVGLQLQPGQDLLLTAPSVALPLVRKVAEHAYKAG CCCCCCHHHHCCHHHHHHHHHHHHHHCCEECCCCCEEEECCHHHHHHHHHHHHHHHHCC AGIVTSFFSDEELTLARYRYGHDESFDRAADWLYQGMAKAFSENTARLAIVGDNPMLLSG CCCEEHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECC QDPAKVARASKANSKAYQPALEKITNFETNWNIIAYPSAAWAKLVFPDVPEEVAVAKLAD CCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHEEECCCCCHHHHHHHHHH AIFAASRVDREDAVSAWAKHNAVLRERTEWLNGQRFSALHYTGPGMDLTIGLADGHEWEG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCC GASTAKNGIVCNANIPTEEVFTTPHCRRVSGHVRSSKPLSYQGTLIDNIQVKFEEGRIVE CCCCCCCCEEEECCCCHHHHCCCCCHHHHCCCCCCCCCCEECCEEEEEEEEEEECCEEEE AKASKGEEVLNKVLDTDEGARRLGEVALVPHSSPISKSGLLFYNTLFDENAASHIALGQC ECCCCCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEHHCCCCCCHHHHHHH YSKCFVNGTSLSPQQIAAQGGNQSLIHIDWMIGAAETNIDGLHEDGRRVPVFRNGEWA HHHHHCCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117 [H]