| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cheW [H]
Identifier: 146337934
GI number: 146337934
Start: 876125
End: 876589
Strand: Reverse
Name: cheW [H]
Synonym: BRADO0824
Alternate gene names: 146337934
Gene position: 876589-876125 (Counterclockwise)
Preceding gene: 146337935
Following gene: 146337933
Centisome position: 11.76
GC content: 63.01
Gene sequence:
>465_bases ATGAGCCAGCACACAGAGCACGCAGCCATTGGCGGCCAGTCGGCCCAGGTCGTCATGATCGGTCTCGGCGACGAGAAATT CGCGCTCGATGCCGCGATCGTGCGCGAGATCATCGATCCCGTGCCGGCGACCAAGGTGGCCGGCGCCAAGCCGTTCGTCC ACAGCATCATCAACGTCCGCGGCAACATCGTTCCGCTCGCGGACCTCAGGCTCCGCTTCGGCATGCCGCCGACGGAGGCC TCGACCGACACGCGGATCGTCGTGATCGAGATCCAGATCGACAGCGACCCGGTGCTGGTCGGGCTGATCGCGGACAAGGT CTACGAGGTCACCGAGATTTCACATGCCGACACGCAGCAGACGCCGCGCGTCGGCGTGAACTGGAAACCCGAATTCATCC GCTTCATCACCAAGTGGCGCGACGAGTTCGTCATCGTACCGAACATCGAACGGATTCTTCACTAG
Upstream 100 bases:
>100_bases TCCTCGGTGACGGCACGGCGGCGCTGATCCTCGACGTCGCCCAGCTGGTCGCGCTCGCGCAGGCGCATGCCGACAAGCAA CATCTCCACGAGGCCGCCTG
Downstream 100 bases:
>100_bases AGATCCGGCTGGGGCACAAGAGGGACACATGCGGTTCACCATCAAGGCGAAGCTGGCAAGCGCCTTCGGCATCACGATCC TGCTGTCGATGATCGCCGGC
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSQHTEHAAIGGQSAQVVMIGLGDEKFALDAAIVREIIDPVPATKVAGAKPFVHSIINVRGNIVPLADLRLRFGMPPTEA STDTRIVVIEIQIDSDPVLVGLIADKVYEVTEISHADTQQTPRVGVNWKPEFIRFITKWRDEFVIVPNIERILH
Sequences:
>Translated_154_residues MSQHTEHAAIGGQSAQVVMIGLGDEKFALDAAIVREIIDPVPATKVAGAKPFVHSIINVRGNIVPLADLRLRFGMPPTEA STDTRIVVIEIQIDSDPVLVGLIADKVYEVTEISHADTQQTPRVGVNWKPEFIRFITKWRDEFVIVPNIERILH >Mature_153_residues SQHTEHAAIGGQSAQVVMIGLGDEKFALDAAIVREIIDPVPATKVAGAKPFVHSIINVRGNIVPLADLRLRFGMPPTEAS TDTRIVVIEIQIDSDPVLVGLIADKVYEVTEISHADTQQTPRVGVNWKPEFIRFITKWRDEFVIVPNIERILH
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=133, Percent_Identity=27.8195488721804, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17039; Mature: 16908
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHTEHAAIGGQSAQVVMIGLGDEKFALDAAIVREIIDPVPATKVAGAKPFVHSIINVR CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC GNIVPLADLRLRFGMPPTEASTDTRIVVIEIQIDSDPVLVGLIADKVYEVTEISHADTQQ CCEEEEEHEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCC TPRVGVNWKPEFIRFITKWRDEFVIVPNIERILH CCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHCC >Mature Secondary Structure SQHTEHAAIGGQSAQVVMIGLGDEKFALDAAIVREIIDPVPATKVAGAKPFVHSIINVR CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC GNIVPLADLRLRFGMPPTEASTDTRIVVIEIQIDSDPVLVGLIADKVYEVTEISHADTQQ CCEEEEEHEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCC TPRVGVNWKPEFIRFITKWRDEFVIVPNIERILH CCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7623670; 11481430 [H]