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The map label for this gene is tse [H]

Identifier: 146337933

GI number: 146337933

Start: 874393

End: 876096

Strand: Reverse

Name: tse [H]

Synonym: BRADO0823

Alternate gene names: 146337933

Gene position: 876096-874393 (Counterclockwise)

Preceding gene: 146337934

Following gene: 146337932

Centisome position: 11.75

GC content: 67.9

Gene sequence:

>1704_bases
ATGCGGTTCACCATCAAGGCGAAGCTGGCAAGCGCCTTCGGCATCACGATCCTGCTGTCGATGATCGCCGGCTCGCAAGG
CTATCTGAAGCTCACCGATACCTTGAACACGACCGACACGATCATCGCGGCGGGATCGCGGGTCGAGAAGGCCGGCAATA
TCGAAAAGCTGCTGCTGCTGCAGGTCCGGGCCGAGAAGAACGCCATTCTTGCCCCCAGCGAGTCCGAAACCGCCCGCTTC
GCGAACGAGATCGGAAACATCCGCGGCAACTTCGTCAAGGCGAAGGACGAGCTCTACGAATCCTCGACCGAGGCCGGCAA
GAAGCTGCTCGACAAGGTGTCCGCTGCCTACACCCGGCTGAACGCCGAGCAGGATCAAGTCCTCAAGATCGCAGCCTCGG
ACAAGGCCAAGGCGACGGAGCTGTCGACCGGGCCCGTGCGGAAGGCGGTCGGAGAGGTCACGCAGACTCTCACGGACTAC
ACGACCTTCGTGCAGAAGGTGATGACCGATCATCAGGCCCAGGCGCGGGAGGAAGGCGCCAGGGCGCAGCTGGTCGTGAT
CAGCCTGGTGACGGCATCGATCGTCATCGCGACGATCTCCGCGCTGTGGATCGCGCTCAGCATCGGCCGGGCGCTCGGTC
GCGCGGTCGGCCTGGCCGGCGCGGTGGCCAGCGGCGACCTGAGCCAGACGCTCAAGGTCTCGAGCAATGACGAGGTCGGC
GATCTCGTCACCTCGCTCAATACGATGTCGGAGAAGCTGCGCCAGATCGTCGGCGAGGCGCTGACCGCGGCGCAGAACGT
CTCCGCCGGCAGCCAGGAGCTGTCGGCCAGCGCCGAGCAGCTGTCGCAGGGCGCGACCGAGCAGGCTTCGTCGGCCGAGG
AAGCCTCGTCCTCGATGGAGGAGATGGCCGCGAACGTGAAGCAGAACGCCGAGAACGCCAACCAGACCGAGAAGATCGCG
GCGCAGTCCGCCAAGGACGCCGAGGCCAGCGGCGCTGCCGTCGGCCGCGCGGTGGAGGCGATGCAGACCATCGCCAGCAA
GATCACCATCGTTCAGGAGATCGCGCGCCAGACCGATCTCTTGGCGCTCAACGCCGCGGTCGAAGCCGCGCGCGCCGGCG
AGCACGGCAAGGGCTTCGCGGTGGTCGCCTCCGAGGTGCGCAAGCTCGCCGAACGCAGCCAGGCCGCCGCGACCGAGATC
GGGCAGTTGTCGGGCGAGACCCTGAAGGTCGCGCAGGACGCCGGGACGATGCTGGCCAAGCTGGTGCCCGACATCAAGCG
GACGGCGGAGCTGGTCGTCGAGATCAGCGTGGCCTGCCGCGAACAGGATGTCGGCGCCGCGCAGATCAACCAGGCGATCC
AGCAGCTCGATCAGGTCGGCCAGCAGAACGCCAGCGCCTCGGAGCAGGTGTCGGCCACATCGGAGGAGCTGGCGTCGCAG
GCGGAGCAGCTGCAGAGCGCGATCTCCTTCTTCCGGATCGGCGGTGCGGCCGAGCCGGCGCTGCGGGACGAGCCGATCGA
GCGTGCCGTCGTTCAGTTGCGCTCGAAGGCCTCGGCCATGGCTGCCGCCGAGCGCGGCGCGCAACCCCCCGCGCCAAAGG
CAAGGCCGGCGCGCGCCGCACGCGTCGCCGCCGGCGGCTCGGGTTTCGCCTTCAACCTCGACAACGCCGCGGATGACCGC
GACGACGACTTCAAGCGGTTCTGA

Upstream 100 bases:

>100_bases
TTCATCCGCTTCATCACCAAGTGGCGCGACGAGTTCGTCATCGTACCGAACATCGAACGGATTCTTCACTAGAGATCCGG
CTGGGGCACAAGAGGGACAC

Downstream 100 bases:

>100_bases
CCCGATCCGGCGCCGCCGCTCCGGACACGGTCACCACAGATCCAAAGGGACCTCAGATGAGATTCACGGTCAAAGCGAAG
CTGGCGGCGTCGTTCGGCGT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MRFTIKAKLASAFGITILLSMIAGSQGYLKLTDTLNTTDTIIAAGSRVEKAGNIEKLLLLQVRAEKNAILAPSESETARF
ANEIGNIRGNFVKAKDELYESSTEAGKKLLDKVSAAYTRLNAEQDQVLKIAASDKAKATELSTGPVRKAVGEVTQTLTDY
TTFVQKVMTDHQAQAREEGARAQLVVISLVTASIVIATISALWIALSIGRALGRAVGLAGAVASGDLSQTLKVSSNDEVG
DLVTSLNTMSEKLRQIVGEALTAAQNVSAGSQELSASAEQLSQGATEQASSAEEASSSMEEMAANVKQNAENANQTEKIA
AQSAKDAEASGAAVGRAVEAMQTIASKITIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQAAATEI
GQLSGETLKVAQDAGTMLAKLVPDIKRTAELVVEISVACREQDVGAAQINQAIQQLDQVGQQNASASEQVSATSEELASQ
AEQLQSAISFFRIGGAAEPALRDEPIERAVVQLRSKASAMAAAERGAQPPAPKARPARAARVAAGGSGFAFNLDNAADDR
DDDFKRF

Sequences:

>Translated_567_residues
MRFTIKAKLASAFGITILLSMIAGSQGYLKLTDTLNTTDTIIAAGSRVEKAGNIEKLLLLQVRAEKNAILAPSESETARF
ANEIGNIRGNFVKAKDELYESSTEAGKKLLDKVSAAYTRLNAEQDQVLKIAASDKAKATELSTGPVRKAVGEVTQTLTDY
TTFVQKVMTDHQAQAREEGARAQLVVISLVTASIVIATISALWIALSIGRALGRAVGLAGAVASGDLSQTLKVSSNDEVG
DLVTSLNTMSEKLRQIVGEALTAAQNVSAGSQELSASAEQLSQGATEQASSAEEASSSMEEMAANVKQNAENANQTEKIA
AQSAKDAEASGAAVGRAVEAMQTIASKITIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQAAATEI
GQLSGETLKVAQDAGTMLAKLVPDIKRTAELVVEISVACREQDVGAAQINQAIQQLDQVGQQNASASEQVSATSEELASQ
AEQLQSAISFFRIGGAAEPALRDEPIERAVVQLRSKASAMAAAERGAQPPAPKARPARAARVAAGGSGFAFNLDNAADDR
DDDFKRF
>Mature_567_residues
MRFTIKAKLASAFGITILLSMIAGSQGYLKLTDTLNTTDTIIAAGSRVEKAGNIEKLLLLQVRAEKNAILAPSESETARF
ANEIGNIRGNFVKAKDELYESSTEAGKKLLDKVSAAYTRLNAEQDQVLKIAASDKAKATELSTGPVRKAVGEVTQTLTDY
TTFVQKVMTDHQAQAREEGARAQLVVISLVTASIVIATISALWIALSIGRALGRAVGLAGAVASGDLSQTLKVSSNDEVG
DLVTSLNTMSEKLRQIVGEALTAAQNVSAGSQELSASAEQLSQGATEQASSAEEASSSMEEMAANVKQNAENANQTEKIA
AQSAKDAEASGAAVGRAVEAMQTIASKITIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQAAATEI
GQLSGETLKVAQDAGTMLAKLVPDIKRTAELVVEISVACREQDVGAAQINQAIQQLDQVGQQNASASEQVSATSEELASQ
AEQLQSAISFFRIGGAAEPALRDEPIERAVVQLRSKASAMAAAERGAQPPAPKARPARAARVAAGGSGFAFNLDNAADDR
DDDFKRF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=369, Percent_Identity=33.8753387533875, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI1787690, Length=345, Percent_Identity=37.1014492753623, Blast_Score=180, Evalue=3e-46,
Organism=Escherichia coli, GI2367378, Length=377, Percent_Identity=35.2785145888594, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1788195, Length=331, Percent_Identity=37.4622356495468, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1789453, Length=321, Percent_Identity=28.9719626168224, Blast_Score=132, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59294; Mature: 59294

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTIKAKLASAFGITILLSMIAGSQGYLKLTDTLNTTDTIIAAGSRVEKAGNIEKLLLL
CCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHCCCHHHHHHH
QVRAEKNAILAPSESETARFANEIGNIRGNFVKAKDELYESSTEAGKKLLDKVSAAYTRL
HHHCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAEQDQVLKIAASDKAKATELSTGPVRKAVGEVTQTLTDYTTFVQKVMTDHQAQAREEGA
CCCHHHHEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RAQLVVISLVTASIVIATISALWIALSIGRALGRAVGLAGAVASGDLSQTLKVSSNDEVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCHHH
DLVTSLNTMSEKLRQIVGEALTAAQNVSAGSQELSASAEQLSQGATEQASSAEEASSSME
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EMAANVKQNAENANQTEKIAAQSAKDAEASGAAVGRAVEAMQTIASKITIVQEIARQTDL
HHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALNAAVEAARAGEHGKGFAVVASEVRKLAERSQAAATEIGQLSGETLKVAQDAGTMLAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LVPDIKRTAELVVEISVACREQDVGAAQINQAIQQLDQVGQQNASASEQVSATSEELASQ
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AEQLQSAISFFRIGGAAEPALRDEPIERAVVQLRSKASAMAAAERGAQPPAPKARPARAA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
RVAAGGSGFAFNLDNAADDRDDDFKRF
HHCCCCCCCEEECCCCCCCCCCHHCCC
>Mature Secondary Structure
MRFTIKAKLASAFGITILLSMIAGSQGYLKLTDTLNTTDTIIAAGSRVEKAGNIEKLLLL
CCEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHCCCHHHHHHH
QVRAEKNAILAPSESETARFANEIGNIRGNFVKAKDELYESSTEAGKKLLDKVSAAYTRL
HHHCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAEQDQVLKIAASDKAKATELSTGPVRKAVGEVTQTLTDYTTFVQKVMTDHQAQAREEGA
CCCHHHHEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RAQLVVISLVTASIVIATISALWIALSIGRALGRAVGLAGAVASGDLSQTLKVSSNDEVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCHHH
DLVTSLNTMSEKLRQIVGEALTAAQNVSAGSQELSASAEQLSQGATEQASSAEEASSSME
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EMAANVKQNAENANQTEKIAAQSAKDAEASGAAVGRAVEAMQTIASKITIVQEIARQTDL
HHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALNAAVEAARAGEHGKGFAVVASEVRKLAERSQAAATEIGQLSGETLKVAQDAGTMLAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LVPDIKRTAELVVEISVACREQDVGAAQINQAIQQLDQVGQQNASASEQVSATSEELASQ
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AEQLQSAISFFRIGGAAEPALRDEPIERAVVQLRSKASAMAAAERGAQPPAPKARPARAA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
RVAAGGSGFAFNLDNAADDRDDDFKRF
HHCCCCCCCEEECCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]