| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yieH [H]
Identifier: 146337214
GI number: 146337214
Start: 45763
End: 46482
Strand: Direct
Name: yieH [H]
Synonym: BRADO0040
Alternate gene names: 146337214
Gene position: 45763-46482 (Clockwise)
Preceding gene: 146337213
Following gene: 146337215
Centisome position: 0.61
GC content: 66.39
Gene sequence:
>720_bases ATGGCTGACGCGGCTCCGCCTTCCCCGCTCGATCTCGTCATTTTTGATTGCGACGGCGTGCTGGTCGACAGCGAGGTGAT CTCCTGTCAGGCGCACGCCGACGTGCTTAGCAGTTGCGGCTATCCGATCACTGCGAATCAGGTGTTCGACCGTTTCCTCG GCCGTTCCTCCAAACAGGCGACGCTGGAGGTGGAGGCCGAGCTCGGCCGCAGCTTGCCCGCCGACTTCAATGCGCGGTTG CAGGACCGGCTGTTCCGCGCCTTCGAGCAGGACCTTCATCCCGTCCCCGGAATCGTCGAGACACTCGACGCGCTTCAGCT CCCGGTCTGCGTGGCGTCGTCCGGCTCGCATCAGCGCATGCGGGTCAGCCTCGGCGCGACCCGCCTTTATGACCGTCTTG CCCCGCACATCTTCTCGTCGTCGCAGGTCGAGAACGGCAAGCCGGCGCCCGATCTGTTCCTGTTCGCGGCGGCCCAGATG AGGGCTCGTCCCGCTGCCTGCGTGGTGGTCGAGGACAGCCTCGCCGGTATCCGGGGCGGCGTCGCCGCCGGAATGACCGT GCTCGGGTTCCATGGCGGCAGTCATTGCCGGCCCGGTCACGCGGAAAGCCTGCGCGCGGCCGGCGCAGAGCTGGTGTTCG ACGATATGCGCCAGCTGCCAATGATTCTCAGCCGGCTGGCTGAGAAAACGGGGCCACTCGCTGGATTTTCGGCGGTCTAG
Upstream 100 bases:
>100_bases GAGATCGAGAAGCTGCAGGCCGAGATCGCCCGCAGGCTCGGCTACAAGCTGGTCGACCACCGGCTCGAGCTGTATTGCGT GCCGCTCGACGAAGAGACGA
Downstream 100 bases:
>100_bases CCTATATCTGAGGCCCGCGCCGAGTTCGGCGCGCCTCCGACCGCTGCAAGGGTCCATGACGCCGCCGCGCAAGCTGCACA TCAAATCCTATGGCTGCCAG
Product: putative haloacid dehalogenase-like hydrolase phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MADAAPPSPLDLVIFDCDGVLVDSEVISCQAHADVLSSCGYPITANQVFDRFLGRSSKQATLEVEAELGRSLPADFNARL QDRLFRAFEQDLHPVPGIVETLDALQLPVCVASSGSHQRMRVSLGATRLYDRLAPHIFSSSQVENGKPAPDLFLFAAAQM RARPAACVVVEDSLAGIRGGVAAGMTVLGFHGGSHCRPGHAESLRAAGAELVFDDMRQLPMILSRLAEKTGPLAGFSAV
Sequences:
>Translated_239_residues MADAAPPSPLDLVIFDCDGVLVDSEVISCQAHADVLSSCGYPITANQVFDRFLGRSSKQATLEVEAELGRSLPADFNARL QDRLFRAFEQDLHPVPGIVETLDALQLPVCVASSGSHQRMRVSLGATRLYDRLAPHIFSSSQVENGKPAPDLFLFAAAQM RARPAACVVVEDSLAGIRGGVAAGMTVLGFHGGSHCRPGHAESLRAAGAELVFDDMRQLPMILSRLAEKTGPLAGFSAV >Mature_238_residues ADAAPPSPLDLVIFDCDGVLVDSEVISCQAHADVLSSCGYPITANQVFDRFLGRSSKQATLEVEAELGRSLPADFNARLQ DRLFRAFEQDLHPVPGIVETLDALQLPVCVASSGSHQRMRVSLGATRLYDRLAPHIFSSSQVENGKPAPDLFLFAAAQMR ARPAACVVVEDSLAGIRGGVAAGMTVLGFHGGSHCRPGHAESLRAAGAELVFDDMRQLPMILSRLAEKTGPLAGFSAV
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=192, Percent_Identity=32.2916666666667, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787576, Length=201, Percent_Identity=31.3432835820896, Blast_Score=64, Evalue=7e-12, Organism=Drosophila melanogaster, GI20129151, Length=192, Percent_Identity=27.6041666666667, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550911, Length=191, Percent_Identity=30.8900523560209, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116008157, Length=190, Percent_Identity=30.5263157894737, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25395; Mature: 25264
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAAPPSPLDLVIFDCDGVLVDSEVISCQAHADVLSSCGYPITANQVFDRFLGRSSKQA CCCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCE TLEVEAELGRSLPADFNARLQDRLFRAFEQDLHPVPGIVETLDALQLPVCVASSGSHQRM EEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCEE RVSLGATRLYDRLAPHIFSSSQVENGKPAPDLFLFAAAQMRARPAACVVVEDSLAGIRGG EEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCC VAAGMTVLGFHGGSHCRPGHAESLRAAGAELVFDDMRQLPMILSRLAEKTGPLAGFSAV HHHCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ADAAPPSPLDLVIFDCDGVLVDSEVISCQAHADVLSSCGYPITANQVFDRFLGRSSKQA CCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCE TLEVEAELGRSLPADFNARLQDRLFRAFEQDLHPVPGIVETLDALQLPVCVASSGSHQRM EEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCEE RVSLGATRLYDRLAPHIFSSSQVENGKPAPDLFLFAAAQMRARPAACVVVEDSLAGIRGG EEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCC VAAGMTVLGFHGGSHCRPGHAESLRAAGAELVFDDMRQLPMILSRLAEKTGPLAGFSAV HHHCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]