| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is fur [H]
Identifier: 146337213
GI number: 146337213
Start: 45318
End: 45770
Strand: Direct
Name: fur [H]
Synonym: BRADO0039
Alternate gene names: 146337213
Gene position: 45318-45770 (Clockwise)
Preceding gene: 146337212
Following gene: 146337214
Centisome position: 0.61
GC content: 63.36
Gene sequence:
>453_bases ATGACTTCCTTGAAGACAACGCCAGCGCCCAATTCCACCGGTATCGAGGCCCGTTGCGCCGCCACCGGCATGCGGATGAC CGAGCAGCGCCGGGTCATCGCCCGCGTGCTCGCCGAGGCGAGCGACCATCCCGACGTCGAGGAACTGTATCGGCGCTGTG TCGCGGTCGACGACAAGATCTCGATCTCCACGGTCTACCGGACCGTGAAGCTGTTCGAGGACGCCGGCATCATCGAGCGT CACGATTTCCGCGAAGGCCGTGCCCGCTACGAGCAGATGCGTGACAGCCATCACGACCACCTGATCAATCTGCGTGACGG CAAGGTGATCGAGTTCACCTCCGAGGAGATCGAGAAGCTGCAGGCCGAGATCGCCCGCAGGCTCGGCTACAAGCTGGTCG ACCACCGGCTCGAGCTGTATTGCGTGCCGCTCGACGAAGAGACGAATGGCTGA
Upstream 100 bases:
>100_bases CTGCAGCCTGGCGGGGAACAGTTGAACGCGCTTCTGATGCGCCGGGACTTGTCGTAACCTGCGCTTGGTGGCAGAAAGCG CATCCTTGAGGCGAGACACA
Downstream 100 bases:
>100_bases CGCGGCTCCGCCTTCCCCGCTCGATCTCGTCATTTTTGATTGCGACGGCGTGCTGGTCGACAGCGAGGTGATCTCCTGTC AGGCGCACGCCGACGTGCTT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTSLKTTPAPNSTGIEARCAATGMRMTEQRRVIARVLAEASDHPDVEELYRRCVAVDDKISISTVYRTVKLFEDAGIIER HDFREGRARYEQMRDSHHDHLINLRDGKVIEFTSEEIEKLQAEIARRLGYKLVDHRLELYCVPLDEETNG
Sequences:
>Translated_150_residues MTSLKTTPAPNSTGIEARCAATGMRMTEQRRVIARVLAEASDHPDVEELYRRCVAVDDKISISTVYRTVKLFEDAGIIER HDFREGRARYEQMRDSHHDHLINLRDGKVIEFTSEEIEKLQAEIARRLGYKLVDHRLELYCVPLDEETNG >Mature_149_residues TSLKTTPAPNSTGIEARCAATGMRMTEQRRVIARVLAEASDHPDVEELYRRCVAVDDKISISTVYRTVKLFEDAGIIERH DFREGRARYEQMRDSHHDHLINLRDGKVIEFTSEEIEKLQAEIARRLGYKLVDHRLELYCVPLDEETNG
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=120, Percent_Identity=43.3333333333333, Blast_Score=101, Evalue=2e-23,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17287; Mature: 17156
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLKTTPAPNSTGIEARCAATGMRMTEQRRVIARVLAEASDHPDVEELYRRCVAVDDKI CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC SISTVYRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINLRDGKVIEFTSEEIEKL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECHHHHHHH QAEIARRLGYKLVDHRLELYCVPLDEETNG HHHHHHHHHHHHHHCCEEEEEEECCCCCCC >Mature Secondary Structure TSLKTTPAPNSTGIEARCAATGMRMTEQRRVIARVLAEASDHPDVEELYRRCVAVDDKI CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC SISTVYRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINLRDGKVIEFTSEEIEKL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECHHHHHHH QAEIARRLGYKLVDHRLELYCVPLDEETNG HHHHHHHHHHHHHHCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9835040 [H]