| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is f1pep1 [H]
Identifier: 146302759
GI number: 146302759
Start: 6070932
End: 6073088
Strand: Direct
Name: f1pep1 [H]
Synonym: Fjoh_5032
Alternate gene names: 146302759
Gene position: 6070932-6073088 (Clockwise)
Preceding gene: 146302758
Following gene: 146302760
Centisome position: 99.57
GC content: 33.7
Gene sequence:
>2157_bases ATGATCAAAAAAACCGCTTTCGCTCTTTTAGTTTTTATTACAAGTCAAGCTTCACAAGCCCAGTACAAATACCCTGCAAC TCCTGAACGTCCTGTTGTAGAGGATTATTTTGGAACAAAAATCACAGATTCATACAGATGGCTTGAAGACATGAACAATC CTGAAGTTCAAAAATGGTTCAAAGACGAATCGGATTATACCAACTCTATTGTGAAAACAATTTCTGGACGTGATGCTCTT TTTAACAGAATGAAAGAAATTCAAGCTTTGAGTGGAGATCAATACGGAACTATTAGACAAGTTGGAGATATTTATTACTA TACAAAAAATAAAAAGAAAGAAAACATATATAAATTGTATTTCCGTAAAAATAGAAACGGAGCTGAAATTTTATTATTAG ATCCCAGCACAATAACTAAAGGTGCCACTATAACCAGTTTTAATATTAGTCCTGACAATAAAAAATTGGCAGTAACTATA TCTGAAGATGGCGCAGAAGTTTGCGATCTTAAAATTATGGATCTTGAATCAAAAAAATTCCTCTCAGATAAACTTACGCC TGTTTGGAGCGAATTCCCTTTTGAATTTACTCCAGACAGTAAAGCCATAACCTACACTCAAATGGTCACTAGAAATAATA CAAGTGACGATTTTTTGAAGAACATGAAATCGCTTATACATGTAATTGGCACTGATCCCAAAACAGATAAAATACTTGCT TCAAAAGAAAACAATCCTGAGTTAGAAATTTTAGCGGCACAATTTCCTTCTGTTAAGCTTCCTGATGATTATTCGTATGT CATTTTGGATATTGGATCTACAAAAAATGAAGAATTTTCTTTTTATGCCCCGTTTTCAGAACTGGGAAAATCAAAAATTA ATTGGAAACCATTAATAAAATATGAAGATGAAATAACTGACAGCCAAATTATTGGCGACAAAATATTTTTCCTTACTCAT AAAAATACACCTAATTATAAACTAGCATATACAAGTCTAAAAAATCCAGATTTCAACAATCCAACGATTCTTGTTCCTGA AAGCAATAAAATAGTACGAAGATTAAGAAAGTCTAAAAACTTCATTTACTATAATTTGAGTGACGGAATCAATCAGGAAA TTTTTCAACTTAATGCCAAAACTTTAGAAATCAAAAAGATTCCAATACCTGCGGGTTCTAATGCCGGATATCCACTAAGT CCACGTTACAACGATGATCTGATGCTTTTTAACAATGGCTGGGTTACACCATCAACAGATTATGATTATAACGGCTTAAC AGGTAAATTAGAAAAAAGCAAAGAATTAACATCTAATGGTACATTCCCTGACTTTAGCAAAGATTATGTTGTAAAAGAAA TAGAAGTACCAAGTCATGATGGAGTAATGGTGCCTTTATCTATAATTTATCCTAAAAACATCAAAATGGATGGTTCTACA TCTTGCTTTATTACAGGATATGGTGCCTATGGAATTAGCCAATATCCGTATTTTGTCGGCCCTAGTTTAATGACTTTATT AGAACAGCATACTATTGTAGCTTTTACACACATAAGAGGCGGAGGTGAAAAAGGCAATCAATGGCATGTAGACGGAATGA AAGCTAAAAAACCAAATACATGGAAAGACTTTATTGCCTGTTCTGAATATTTGATAAAAGAAAAATATACTTCTAAAGAA AAACTTATTGGAAATGGAGTAAGCATGGGAGGTGTATTGATTGGAAGAGCAATTACCGAACGCCCTGATCTTTACAAAGT GGCACTTGTAGAAGTAGGCTGCACAAACACCTTAAGAATGGAAACTACTCCTAATGGTCCAAACCAAATACCTGAAATTG GCTCTCTAAAAAATGAAGAAGATGTAAAACATATATTAGAAATGGATTCGCAAAGCAAGGTAAAGAAAGGAGTAAAATAT CCTGCGGTTTTAATTCGCACCGGTATTAACGACCCTAGAGTTACCCCTTGGGAGCCTGGTAAATTTGCAGCTATTTTACA AAATTCCACCAGCTCTGATAATCCGGTTTTACTGCATGTTAATTATGCCAATGGTCATCATTCTAATGATTTGGATGTTA CCTTTGGAGATGAAGCTGACATGTATGCCTTTGCATTGTGGCAGGTTGGAAATACAAAATTTCAAATTAAACCATAA
Upstream 100 bases:
>100_bases AAATTGACTCTTCCAATTAAATAAAATGTAACATTTTTCTTAAAATAACGTCTTTTATACCAAAACCAAGAACCAATAAT TATAAATTTATTTAAAAATA
Downstream 100 bases:
>100_bases CTTTTAAATTTTTGCTTTTTTATAAGATTCTATAAATGCTTGCGAAGACGTGCTGTAGTGCGTCTTCGCAAAATAATAAA TAAAAAAATTAAACTTTTTT
Product: prolyl oligopeptidase
Products: NA
Alternate protein names: Post-proline cleaving enzyme; Proline-specific endopeptidase; PE; PSE [H]
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MIKKTAFALLVFITSQASQAQYKYPATPERPVVEDYFGTKITDSYRWLEDMNNPEVQKWFKDESDYTNSIVKTISGRDAL FNRMKEIQALSGDQYGTIRQVGDIYYYTKNKKKENIYKLYFRKNRNGAEILLLDPSTITKGATITSFNISPDNKKLAVTI SEDGAEVCDLKIMDLESKKFLSDKLTPVWSEFPFEFTPDSKAITYTQMVTRNNTSDDFLKNMKSLIHVIGTDPKTDKILA SKENNPELEILAAQFPSVKLPDDYSYVILDIGSTKNEEFSFYAPFSELGKSKINWKPLIKYEDEITDSQIIGDKIFFLTH KNTPNYKLAYTSLKNPDFNNPTILVPESNKIVRRLRKSKNFIYYNLSDGINQEIFQLNAKTLEIKKIPIPAGSNAGYPLS PRYNDDLMLFNNGWVTPSTDYDYNGLTGKLEKSKELTSNGTFPDFSKDYVVKEIEVPSHDGVMVPLSIIYPKNIKMDGST SCFITGYGAYGISQYPYFVGPSLMTLLEQHTIVAFTHIRGGGEKGNQWHVDGMKAKKPNTWKDFIACSEYLIKEKYTSKE KLIGNGVSMGGVLIGRAITERPDLYKVALVEVGCTNTLRMETTPNGPNQIPEIGSLKNEEDVKHILEMDSQSKVKKGVKY PAVLIRTGINDPRVTPWEPGKFAAILQNSTSSDNPVLLHVNYANGHHSNDLDVTFGDEADMYAFALWQVGNTKFQIKP
Sequences:
>Translated_718_residues MIKKTAFALLVFITSQASQAQYKYPATPERPVVEDYFGTKITDSYRWLEDMNNPEVQKWFKDESDYTNSIVKTISGRDAL FNRMKEIQALSGDQYGTIRQVGDIYYYTKNKKKENIYKLYFRKNRNGAEILLLDPSTITKGATITSFNISPDNKKLAVTI SEDGAEVCDLKIMDLESKKFLSDKLTPVWSEFPFEFTPDSKAITYTQMVTRNNTSDDFLKNMKSLIHVIGTDPKTDKILA SKENNPELEILAAQFPSVKLPDDYSYVILDIGSTKNEEFSFYAPFSELGKSKINWKPLIKYEDEITDSQIIGDKIFFLTH KNTPNYKLAYTSLKNPDFNNPTILVPESNKIVRRLRKSKNFIYYNLSDGINQEIFQLNAKTLEIKKIPIPAGSNAGYPLS PRYNDDLMLFNNGWVTPSTDYDYNGLTGKLEKSKELTSNGTFPDFSKDYVVKEIEVPSHDGVMVPLSIIYPKNIKMDGST SCFITGYGAYGISQYPYFVGPSLMTLLEQHTIVAFTHIRGGGEKGNQWHVDGMKAKKPNTWKDFIACSEYLIKEKYTSKE KLIGNGVSMGGVLIGRAITERPDLYKVALVEVGCTNTLRMETTPNGPNQIPEIGSLKNEEDVKHILEMDSQSKVKKGVKY PAVLIRTGINDPRVTPWEPGKFAAILQNSTSSDNPVLLHVNYANGHHSNDLDVTFGDEADMYAFALWQVGNTKFQIKP >Mature_718_residues MIKKTAFALLVFITSQASQAQYKYPATPERPVVEDYFGTKITDSYRWLEDMNNPEVQKWFKDESDYTNSIVKTISGRDAL FNRMKEIQALSGDQYGTIRQVGDIYYYTKNKKKENIYKLYFRKNRNGAEILLLDPSTITKGATITSFNISPDNKKLAVTI SEDGAEVCDLKIMDLESKKFLSDKLTPVWSEFPFEFTPDSKAITYTQMVTRNNTSDDFLKNMKSLIHVIGTDPKTDKILA SKENNPELEILAAQFPSVKLPDDYSYVILDIGSTKNEEFSFYAPFSELGKSKINWKPLIKYEDEITDSQIIGDKIFFLTH KNTPNYKLAYTSLKNPDFNNPTILVPESNKIVRRLRKSKNFIYYNLSDGINQEIFQLNAKTLEIKKIPIPAGSNAGYPLS PRYNDDLMLFNNGWVTPSTDYDYNGLTGKLEKSKELTSNGTFPDFSKDYVVKEIEVPSHDGVMVPLSIIYPKNIKMDGST SCFITGYGAYGISQYPYFVGPSLMTLLEQHTIVAFTHIRGGGEKGNQWHVDGMKAKKPNTWKDFIACSEYLIKEKYTSKE KLIGNGVSMGGVLIGRAITERPDLYKVALVEVGCTNTLRMETTPNGPNQIPEIGSLKNEEDVKHILEMDSQSKVKKGVKY PAVLIRTGINDPRVTPWEPGKFAAILQNSTSSDNPVLLHVNYANGHHSNDLDVTFGDEADMYAFALWQVGNTKFQIKP
Specific function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond [H]
COG id: COG1505
COG function: function code E; Serine proteases of the peptidase family S9A
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9A family [H]
Homologues:
Organism=Homo sapiens, GI41349456, Length=713, Percent_Identity=28.3309957924264, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI108860686, Length=243, Percent_Identity=28.3950617283951, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI284172420, Length=243, Percent_Identity=28.3950617283951, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI284172413, Length=243, Percent_Identity=28.3950617283951, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI70778815, Length=243, Percent_Identity=28.3950617283951, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI284172438, Length=243, Percent_Identity=28.3950617283951, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI284172431, Length=243, Percent_Identity=28.3950617283951, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI108860692, Length=198, Percent_Identity=29.2929292929293, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1788150, Length=689, Percent_Identity=23.9477503628447, Blast_Score=150, Evalue=2e-37, Organism=Drosophila melanogaster, GI24583414, Length=699, Percent_Identity=29.6137339055794, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI221510989, Length=682, Percent_Identity=27.4193548387097, Blast_Score=213, Evalue=4e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002471 - InterPro: IPR001375 - InterPro: IPR002470 - InterPro: IPR004106 [H]
Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]
EC number: =3.4.21.26 [H]
Molecular weight: Translated: 81205; Mature: 81205
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKTAFALLVFITSQASQAQYKYPATPERPVVEDYFGTKITDSYRWLEDMNNPEVQKWF CCCHHHEEEEEEEECCCCCCEECCCCCCCCCCHHHHCCCEECCCHHHHHHCCCHHHHHHH KDESDYTNSIVKTISGRDALFNRMKEIQALSGDQYGTIRQVGDIYYYTKNKKKENIYKLY CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCCCCCEEEEE FRKNRNGAEILLLDPSTITKGATITSFNISPDNKKLAVTISEDGAEVCDLKIMDLESKKF EEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEEECCCHHH LSDKLTPVWSEFPFEFTPDSKAITYTQMVTRNNTSDDFLKNMKSLIHVIGTDPKTDKILA HHHCCCHHHHCCCCEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCCEEE SKENNPELEILAAQFPSVKLPDDYSYVILDIGSTKNEEFSFYAPFSELGKSKINWKPLIK CCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEECCHHHHCCCCCCCEEEEE YEDEITDSQIIGDKIFFLTHKNTPNYKLAYTSLKNPDFNNPTILVPESNKIVRRLRKSKN ECCCCCCCEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHCCC FIYYNLSDGINQEIFQLNAKTLEIKKIPIPAGSNAGYPLSPRYNDDLMLFNNGWVTPSTD EEEEECCCCCCCHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC YDYNGLTGKLEKSKELTSNGTFPDFSKDYVVKEIEVPSHDGVMVPLSIIYPKNIKMDGST CCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEECCCC SCFITGYGAYGISQYPYFVGPSLMTLLEQHTIVAFTHIRGGGEKGNQWHVDGMKAKKPNT EEEEEEECCCCCCCCCEEECHHHHHHHHCCEEEEEEEECCCCCCCCEEEECCEECCCCCC WKDFIACSEYLIKEKYTSKEKLIGNGVSMGGVLIGRAITERPDLYKVALVEVGCTNTLRM HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEHHHCCCCCEEEEEEEEECCCCEEEE ETTPNGPNQIPEIGSLKNEEDVKHILEMDSQSKVKKGVKYPAVLIRTGINDPRVTPWEPG EECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCC KFAAILQNSTSSDNPVLLHVNYANGHHSNDLDVTFGDEADMYAFALWQVGNTKFQIKP CEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEECC >Mature Secondary Structure MIKKTAFALLVFITSQASQAQYKYPATPERPVVEDYFGTKITDSYRWLEDMNNPEVQKWF CCCHHHEEEEEEEECCCCCCEECCCCCCCCCCHHHHCCCEECCCHHHHHHCCCHHHHHHH KDESDYTNSIVKTISGRDALFNRMKEIQALSGDQYGTIRQVGDIYYYTKNKKKENIYKLY CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCCCCCEEEEE FRKNRNGAEILLLDPSTITKGATITSFNISPDNKKLAVTISEDGAEVCDLKIMDLESKKF EEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEEECCCHHH LSDKLTPVWSEFPFEFTPDSKAITYTQMVTRNNTSDDFLKNMKSLIHVIGTDPKTDKILA HHHCCCHHHHCCCCEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCCEEE SKENNPELEILAAQFPSVKLPDDYSYVILDIGSTKNEEFSFYAPFSELGKSKINWKPLIK CCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEECCHHHHCCCCCCCEEEEE YEDEITDSQIIGDKIFFLTHKNTPNYKLAYTSLKNPDFNNPTILVPESNKIVRRLRKSKN ECCCCCCCEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHCCC FIYYNLSDGINQEIFQLNAKTLEIKKIPIPAGSNAGYPLSPRYNDDLMLFNNGWVTPSTD EEEEECCCCCCCHHHEECCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC YDYNGLTGKLEKSKELTSNGTFPDFSKDYVVKEIEVPSHDGVMVPLSIIYPKNIKMDGST CCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEECCCC SCFITGYGAYGISQYPYFVGPSLMTLLEQHTIVAFTHIRGGGEKGNQWHVDGMKAKKPNT EEEEEEECCCCCCCCCEEECHHHHHHHHCCEEEEEEEECCCCCCCCEEEECCEECCCCCC WKDFIACSEYLIKEKYTSKEKLIGNGVSMGGVLIGRAITERPDLYKVALVEVGCTNTLRM HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEHHHCCCCCEEEEEEEEECCCCEEEE ETTPNGPNQIPEIGSLKNEEDVKHILEMDSQSKVKKGVKYPAVLIRTGINDPRVTPWEPG EECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCC KFAAILQNSTSSDNPVLLHVNYANGHHSNDLDVTFGDEADMYAFALWQVGNTKFQIKP CEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1840588; 7764331 [H]