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The map label for this gene is 146302745

Identifier: 146302745

GI number: 146302745

Start: 6056812

End: 6057723

Strand: Reverse

Name: 146302745

Synonym: Fjoh_5018

Alternate gene names: NA

Gene position: 6057723-6056812 (Counterclockwise)

Preceding gene: 146302749

Following gene: 146302744

Centisome position: 99.36

GC content: 33.22

Gene sequence:

>912_bases
ATGAATAACTTTATTATAATATTCTTCTTTTTGTTTTTAGGATTGCTTTTGCAAAATGTAAAGCGGTTTCCAACTCATAT
TTATAAAACAATTAATAAAATTGTCATTTACATCTGCCTTCCGGCGATTACTTTATATCATATTCCGAAAATAAAATGGA
GCAACGAATTGCTGTTTCCAATAGGAGCGGGGTGGATTAGTTTTTTTCTGGCTTTTGTATTTTTTCATTTTTTAGGAAGA
AGGCTGGGCTGGTCTAATAAATTAATAGGATGCTTAGTTTTAACAGCCGGATTAAGTAATTCCTCCTTTTTGGGTTATCC
AATTGTAGAAGCTTTATTTGGAAAAAAAGGTTTAGAAACTGCTGTTCTGGTAGATCAGCCGGGAACTTTTGTGGTGGTTT
CGACTTTAGGAGTTTTTGTAGCGGCTTTTTATTCAAAAGGAAGTCCTGATTTTAAAAGTATAGCGAAAAAGATAATTCTA
TTTCCGCCTTTTATTACGTTTGTTGTTTCGTGTTTATTAAATGTTTTAGATTACGATTTAGATCTCAATATACAGTCTTT
ATTATTAAAATTAGGAAGTCTGGTTACGCCTTTGGCTTTGTTTTCGGTTGGGCTGCAGCTGACTTTTGACCGAAAAAGCA
AACATTGGAAATTCTTAAGACTCGGACTTTTCTTTAGACTGATCGTAACACCGCTTATCATTTTTATTCTGTATGTTTTT
ATTTTCAACCAGCATTCTGAAGCTATAAAAATTACGATTATTGAAATTGCAATGGCACCCATGATTACAGGTGCAATTCT
CGCTTCTACCTATGGCTTAAAACCAAAATTAAGCAGTATGATGATTGGTTTTGGAATTCCTATTTCGTTTGTAACCCTTG
CCATCTGGTACTTTGTAGTTGGCTTTATTTAA

Upstream 100 bases:

>100_bases
TTTTTTCCAGAACTAAATGAATATATCTTTGCGTGAAATCACCAAATACTAACCATTAGAAAACTAAGGGCTAAGGACTA
ATTACTAAGCACTAAAAAAC

Downstream 100 bases:

>100_bases
TTTATAATAGTAATTAGATAGAGCTTATAGAATTTTAACTTTTTTTTAATTCTTACGTGTTTTCTAAATGTATTTTTTAG
TTAATTTTAGAGGAACTAAA

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNNFIIIFFFLFLGLLLQNVKRFPTHIYKTINKIVIYICLPAITLYHIPKIKWSNELLFPIGAGWISFFLAFVFFHFLGR
RLGWSNKLIGCLVLTAGLSNSSFLGYPIVEALFGKKGLETAVLVDQPGTFVVVSTLGVFVAAFYSKGSPDFKSIAKKIIL
FPPFITFVVSCLLNVLDYDLDLNIQSLLLKLGSLVTPLALFSVGLQLTFDRKSKHWKFLRLGLFFRLIVTPLIIFILYVF
IFNQHSEAIKITIIEIAMAPMITGAILASTYGLKPKLSSMMIGFGIPISFVTLAIWYFVVGFI

Sequences:

>Translated_303_residues
MNNFIIIFFFLFLGLLLQNVKRFPTHIYKTINKIVIYICLPAITLYHIPKIKWSNELLFPIGAGWISFFLAFVFFHFLGR
RLGWSNKLIGCLVLTAGLSNSSFLGYPIVEALFGKKGLETAVLVDQPGTFVVVSTLGVFVAAFYSKGSPDFKSIAKKIIL
FPPFITFVVSCLLNVLDYDLDLNIQSLLLKLGSLVTPLALFSVGLQLTFDRKSKHWKFLRLGLFFRLIVTPLIIFILYVF
IFNQHSEAIKITIIEIAMAPMITGAILASTYGLKPKLSSMMIGFGIPISFVTLAIWYFVVGFI
>Mature_303_residues
MNNFIIIFFFLFLGLLLQNVKRFPTHIYKTINKIVIYICLPAITLYHIPKIKWSNELLFPIGAGWISFFLAFVFFHFLGR
RLGWSNKLIGCLVLTAGLSNSSFLGYPIVEALFGKKGLETAVLVDQPGTFVVVSTLGVFVAAFYSKGSPDFKSIAKKIIL
FPPFITFVVSCLLNVLDYDLDLNIQSLLLKLGSLVTPLALFSVGLQLTFDRKSKHWKFLRLGLFFRLIVTPLIIFILYVF
IFNQHSEAIKITIIEIAMAPMITGAILASTYGLKPKLSSMMIGFGIPISFVTLAIWYFVVGFI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 34090; Mature: 34090

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFIIIFFFLFLGLLLQNVKRFPTHIYKTINKIVIYICLPAITLYHIPKIKWSNELLFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
IGAGWISFFLAFVFFHFLGRRLGWSNKLIGCLVLTAGLSNSSFLGYPIVEALFGKKGLET
ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCE
AVLVDQPGTFVVVSTLGVFVAAFYSKGSPDFKSIAKKIILFPPFITFVVSCLLNVLDYDL
EEEEECCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
DLNIQSLLLKLGSLVTPLALFSVGLQLTFDRKSKHWKFLRLGLFFRLIVTPLIIFILYVF
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFNQHSEAIKITIIEIAMAPMITGAILASTYGLKPKLSSMMIGFGIPISFVTLAIWYFVV
HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
GFI
HCC
>Mature Secondary Structure
MNNFIIIFFFLFLGLLLQNVKRFPTHIYKTINKIVIYICLPAITLYHIPKIKWSNELLFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
IGAGWISFFLAFVFFHFLGRRLGWSNKLIGCLVLTAGLSNSSFLGYPIVEALFGKKGLET
ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCE
AVLVDQPGTFVVVSTLGVFVAAFYSKGSPDFKSIAKKIILFPPFITFVVSCLLNVLDYDL
EEEEECCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
DLNIQSLLLKLGSLVTPLALFSVGLQLTFDRKSKHWKFLRLGLFFRLIVTPLIIFILYVF
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFNQHSEAIKITIIEIAMAPMITGAILASTYGLKPKLSSMMIGFGIPISFVTLAIWYFVV
HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
GFI
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]