| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302749
Identifier: 146302749
GI number: 146302749
Start: 6060466
End: 6060999
Strand: Reverse
Name: 146302749
Synonym: Fjoh_5022
Alternate gene names: NA
Gene position: 6060999-6060466 (Counterclockwise)
Preceding gene: 146302750
Following gene: 146302745
Centisome position: 99.41
GC content: 34.08
Gene sequence:
>534_bases ATGGAAAATTTACAACAAACAAAATTGAAAGTATTACAAGCAATTTTAGTTTTTGCGTTTGTCGCTTTTTTTATAAGCTG CAACAACGATTCTAGTGAAGATCAAAATGCTCAATCAAACACAGAGCAGGAAAATCAACCCAATACTCAAAGATATTTAC CGCACTATGAAGGTGTTATTGTGCAAGCCTGGGGAGCGCATAATATTGACTGCAGTCAGCCGGAAGGGTTTTGTAATTTT GTTTATTACGAATGGAGAACCTATGGCTTTGCGAAACCAAATCCTGGCGGTACACCAGTACGTGTTACAAATGAAAAAGG GAATTTTGTTATGGAAATTCAAAAAAGTGCTTTAACCGCAGAACATAAAAAAGTATTATTGCAAAATGGAGACGTTTATG TAATTCCGGAAGGACAGACTATAGCTCCGGAATTAGTTAAATCCCTTAAGTTCAATTCAGACATTTTAATTCCTGGTAAA TATCGTATTTTAGAAAGTGAAGATACTTATACAATTTCAATGAATGTAAAATAA
Upstream 100 bases:
>100_bases GAAAAGGGTAACAAAAAATAAATTTAATTGATATACACTAAACCAAAAGGCGTAACCTGAAAAGCCAGTAATAGAGTAAG GTCAATTAAATTAATTTATT
Downstream 100 bases:
>100_bases ATGAAATAGTAAAAAAGCTTTAAGGAATTAGAAGCTCTTTTTATATTCGTTTAATAAAAGCTGAGCGGCTGCAAAAGGTG ATATTTCATTATTTTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MENLQQTKLKVLQAILVFAFVAFFISCNNDSSEDQNAQSNTEQENQPNTQRYLPHYEGVIVQAWGAHNIDCSQPEGFCNF VYYEWRTYGFAKPNPGGTPVRVTNEKGNFVMEIQKSALTAEHKKVLLQNGDVYVIPEGQTIAPELVKSLKFNSDILIPGK YRILESEDTYTISMNVK
Sequences:
>Translated_177_residues MENLQQTKLKVLQAILVFAFVAFFISCNNDSSEDQNAQSNTEQENQPNTQRYLPHYEGVIVQAWGAHNIDCSQPEGFCNF VYYEWRTYGFAKPNPGGTPVRVTNEKGNFVMEIQKSALTAEHKKVLLQNGDVYVIPEGQTIAPELVKSLKFNSDILIPGK YRILESEDTYTISMNVK >Mature_177_residues MENLQQTKLKVLQAILVFAFVAFFISCNNDSSEDQNAQSNTEQENQPNTQRYLPHYEGVIVQAWGAHNIDCSQPEGFCNF VYYEWRTYGFAKPNPGGTPVRVTNEKGNFVMEIQKSALTAEHKKVLLQNGDVYVIPEGQTIAPELVKSLKFNSDILIPGK YRILESEDTYTISMNVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20073; Mature: 20073
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLQQTKLKVLQAILVFAFVAFFISCNNDSSEDQNAQSNTEQENQPNTQRYLPHYEGVI CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEE VQAWGAHNIDCSQPEGFCNFVYYEWRTYGFAKPNPGGTPVRVTNEKGNFVMEIQKSALTA EEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEHHHHHH EHKKVLLQNGDVYVIPEGQTIAPELVKSLKFNSDILIPGKYRILESEDTYTISMNVK HHHEEEEECCCEEEEECCCCCHHHHHHHHCCCCCEEECCCEEEEECCCCEEEEEECC >Mature Secondary Structure MENLQQTKLKVLQAILVFAFVAFFISCNNDSSEDQNAQSNTEQENQPNTQRYLPHYEGVI CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEE VQAWGAHNIDCSQPEGFCNFVYYEWRTYGFAKPNPGGTPVRVTNEKGNFVMEIQKSALTA EEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEHHHHHH EHKKVLLQNGDVYVIPEGQTIAPELVKSLKFNSDILIPGKYRILESEDTYTISMNVK HHHEEEEECCCEEEEECCCCCHHHHHHHHCCCCCEEECCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA