| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302706
Identifier: 146302706
GI number: 146302706
Start: 6017228
End: 6018298
Strand: Direct
Name: 146302706
Synonym: Fjoh_4979
Alternate gene names: NA
Gene position: 6017228-6018298 (Clockwise)
Preceding gene: 146302703
Following gene: 146302718
Centisome position: 98.69
GC content: 38.66
Gene sequence:
>1071_bases ATGACCAAAACCATCTGCACATTACTGACAGCCCTATTTTTAATAAGCTGCAGCAAAGATTCAGCCGAACCAGAGCAAAA TCCAGACTCGGCAGAAACCATGTACTTTCCTCCATTAACAGGAACTGTCTGGGAAACAAAATCAATCGCCGACTTAAAAT GGAATCAGAACGCCGTACAGCCGCTTTTAGATTATCTGGAACTTAAGCATTCTAAATCGTTTATTATTTTAGTAAATGGA CGAATTGTTCTGGAAAATTATTTTAACGGACATAGCGCCTCAACAAACTGGTACTGGGCGAGCGCCGGAAAAACGTTAAC TTCGACAGTTACCGGAATTGCACAGCAGGAAAATCTGCTTAATATCAACAATAAGGTTTCACAGTATTTAGGAACCGGAT GGACCAGTGAAACATTAGCACAGGAAAATTTAATTACCTGCAAACATTTACTCACAATGACATCTGGACTTGATGACAGC ACAGATGATGTTGATCCTGCCTCTTTAAAATACAAAGCCGATGCAGGAACACGCTGGGCCTACCATAATGTATATGTAGA ACTGCAGGATGTTGTGGCAAAAGCAAGCGGACAAACCTGGGGGAATTATTTCAACGCTAAATTAAGAGACAAAATAGGAA TGAATGGAACTTGGGTTCAGCTTGGCGTAAACAGCGTTTATACGAGCACAACAAGAAGCATGGCACGTTTTGGATTATTA ATGCTGAATAAAGGAAAATGGGAAAACAATATTATTTTAAACGAAGCTTATTTTAACGAAGCAACAACCACTTCTCAAAA TATTAATCTAGGATACGGCTATTTGTGGTGGCTAAACGGAAAAAGTTCTTATCATTTACCACAGTCACAACTTACTTTTC AGGGAAGCATAATTCCAACAGGACCAAGCGATATGTTTATGGCTTTAGGAAAAAACGATCAAAAAATCTATGTAATTCCA AGCAAAAATATGGTTGTCATTCGAATGGGAGACGCAGCAGATGATGAAAACCTTGCATTATCTGATTTTGACAAAGTCCT CTGGGAGAAAATCAGTGCTTTATACAAATAA
Upstream 100 bases:
>100_bases AAGGTAACTTTATATCATTTAAAAGAAACAAAAAGATCATAAAACCCATTAAACTATTTTACATATTTTTGGTCAAAGCC CTAAACCAAAAACATAAACC
Downstream 100 bases:
>100_bases AAGCAAATAAAAAATCCGAGAATACTTTATCAAACTAAAATATCCTCGGATTTTTTTTTAAACATAATGTTTTATCGCTT CGTTTTAAGTCTTTTTAAAA
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Hydrolase Transmembrane Protein; Beta-Lactamase Family Protein; Beta-Lactamase Class C; Secreted Beta-Lactamase Family Protein; Beta-Lactamase Class C Family Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTKTICTLLTALFLISCSKDSAEPEQNPDSAETMYFPPLTGTVWETKSIADLKWNQNAVQPLLDYLELKHSKSFIILVNG RIVLENYFNGHSASTNWYWASAGKTLTSTVTGIAQQENLLNINNKVSQYLGTGWTSETLAQENLITCKHLLTMTSGLDDS TDDVDPASLKYKADAGTRWAYHNVYVELQDVVAKASGQTWGNYFNAKLRDKIGMNGTWVQLGVNSVYTSTTRSMARFGLL MLNKGKWENNIILNEAYFNEATTTSQNINLGYGYLWWLNGKSSYHLPQSQLTFQGSIIPTGPSDMFMALGKNDQKIYVIP SKNMVVIRMGDAADDENLALSDFDKVLWEKISALYK
Sequences:
>Translated_356_residues MTKTICTLLTALFLISCSKDSAEPEQNPDSAETMYFPPLTGTVWETKSIADLKWNQNAVQPLLDYLELKHSKSFIILVNG RIVLENYFNGHSASTNWYWASAGKTLTSTVTGIAQQENLLNINNKVSQYLGTGWTSETLAQENLITCKHLLTMTSGLDDS TDDVDPASLKYKADAGTRWAYHNVYVELQDVVAKASGQTWGNYFNAKLRDKIGMNGTWVQLGVNSVYTSTTRSMARFGLL MLNKGKWENNIILNEAYFNEATTTSQNINLGYGYLWWLNGKSSYHLPQSQLTFQGSIIPTGPSDMFMALGKNDQKIYVIP SKNMVVIRMGDAADDENLALSDFDKVLWEKISALYK >Mature_355_residues TKTICTLLTALFLISCSKDSAEPEQNPDSAETMYFPPLTGTVWETKSIADLKWNQNAVQPLLDYLELKHSKSFIILVNGR IVLENYFNGHSASTNWYWASAGKTLTSTVTGIAQQENLLNINNKVSQYLGTGWTSETLAQENLITCKHLLTMTSGLDDST DDVDPASLKYKADAGTRWAYHNVYVELQDVVAKASGQTWGNYFNAKLRDKIGMNGTWVQLGVNSVYTSTTRSMARFGLLM LNKGKWENNIILNEAYFNEATTTSQNINLGYGYLWWLNGKSSYHLPQSQLTFQGSIIPTGPSDMFMALGKNDQKIYVIPS KNMVVIRMGDAADDENLALSDFDKVLWEKISALYK
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39835; Mature: 39704
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTICTLLTALFLISCSKDSAEPEQNPDSAETMYFPPLTGTVWETKSIADLKWNQNAVQ CCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCCEECCCCEEECCCCCHHHH PLLDYLELKHSKSFIILVNGRIVLENYFNGHSASTNWYWASAGKTLTSTVTGIAQQENLL HHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCEE NINNKVSQYLGTGWTSETLAQENLITCKHLLTMTSGLDDSTDDVDPASLKYKADAGTRWA CHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEE YHNVYVELQDVVAKASGQTWGNYFNAKLRDKIGMNGTWVQLGVNSVYTSTTRSMARFGLL EEEEEEEHHHHHHHCCCCCCHHHCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCEE MLNKGKWENNIILNEAYFNEATTTSQNINLGYGYLWWLNGKSSYHLPQSQLTFQGSIIPT EEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHEEEECEEECC GPSDMFMALGKNDQKIYVIPSKNMVVIRMGDAADDENLALSDFDKVLWEKISALYK CCCHHEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKTICTLLTALFLISCSKDSAEPEQNPDSAETMYFPPLTGTVWETKSIADLKWNQNAVQ CHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCCEECCCCEEECCCCCHHHH PLLDYLELKHSKSFIILVNGRIVLENYFNGHSASTNWYWASAGKTLTSTVTGIAQQENLL HHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCEE NINNKVSQYLGTGWTSETLAQENLITCKHLLTMTSGLDDSTDDVDPASLKYKADAGTRWA CHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEE YHNVYVELQDVVAKASGQTWGNYFNAKLRDKIGMNGTWVQLGVNSVYTSTTRSMARFGLL EEEEEEEHHHHHHHCCCCCCHHHCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCEE MLNKGKWENNIILNEAYFNEATTTSQNINLGYGYLWWLNGKSSYHLPQSQLTFQGSIIPT EEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHEEEECEEECC GPSDMFMALGKNDQKIYVIPSKNMVVIRMGDAADDENLALSDFDKVLWEKISALYK CCCHHEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA