| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302718
Identifier: 146302718
GI number: 146302718
Start: 6027889
End: 6028479
Strand: Direct
Name: 146302718
Synonym: Fjoh_4991
Alternate gene names: NA
Gene position: 6027889-6028479 (Clockwise)
Preceding gene: 146302706
Following gene: 146302720
Centisome position: 98.87
GC content: 36.72
Gene sequence:
>591_bases ATGAAAAACAAAACTCTGGCTTTTTTAAGTTTCTTTCTTTTCCTGACTGTATGGTTTGGAATATTAGGTTTCGCTGCTAT AGAAAAAACTTCGAATTCCGGTCTTGATTTGGTAAAAACCTCAACCTGGTATATTGCCGGTCCAGCCCTGGAAAATCAGG AAACGATTAACAGGATTCGAAAAGAAAAAGGAATTGTAAAAGTTACTGCAAAAGATAATCCGATTGGAGAAATCGAACTG AATGTAATGATTACAGAAGCAGATTCTAACGACGGCGCTCCGACGAATTTGTCTGAAAATTCAAAATACCTCAGTATTAC TTACAAATCTTCTCATCTTATAAAAATCCAGGCAAGAGAAGGAAACGCAGAAGGAACTGGCTGCATTCATGGCGGTTCGC ACCCCAGAGTTGATTTACCTGTTTCTGCCAAAAAATTTACAACGATAAAAATCCCATGGACGGATTTTAAACAAGACGGT GATCCAAACGGAAAAACATTAAATATTCATAATCTCTGTAAATTCAATTTTGTGAATTATAATCCGGTTTCGGGAGCGAG TCTGGAGATAAAATCTGTTGTTATAGAATAG
Upstream 100 bases:
>100_bases AATATCTTACAAATTTAAAATTTTATTCAGAATAGACGTTCTTTTAAAAATAATAAAAAGAAAATTCTATTTTTGAATAC AGTAAACAATTTCTCTTTTG
Downstream 100 bases:
>100_bases TATTCAGTCTCAGTCTACAGTATTCAGTCACAGTTTACAGTTTACAGTCTCAGACTGAATACTGTGACTAAAAATTAAAG ATGAAGCTGAATTTTAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKNKTLAFLSFFLFLTVWFGILGFAAIEKTSNSGLDLVKTSTWYIAGPALENQETINRIRKEKGIVKVTAKDNPIGEIEL NVMITEADSNDGAPTNLSENSKYLSITYKSSHLIKIQAREGNAEGTGCIHGGSHPRVDLPVSAKKFTTIKIPWTDFKQDG DPNGKTLNIHNLCKFNFVNYNPVSGASLEIKSVVIE
Sequences:
>Translated_196_residues MKNKTLAFLSFFLFLTVWFGILGFAAIEKTSNSGLDLVKTSTWYIAGPALENQETINRIRKEKGIVKVTAKDNPIGEIEL NVMITEADSNDGAPTNLSENSKYLSITYKSSHLIKIQAREGNAEGTGCIHGGSHPRVDLPVSAKKFTTIKIPWTDFKQDG DPNGKTLNIHNLCKFNFVNYNPVSGASLEIKSVVIE >Mature_196_residues MKNKTLAFLSFFLFLTVWFGILGFAAIEKTSNSGLDLVKTSTWYIAGPALENQETINRIRKEKGIVKVTAKDNPIGEIEL NVMITEADSNDGAPTNLSENSKYLSITYKSSHLIKIQAREGNAEGTGCIHGGSHPRVDLPVSAKKFTTIKIPWTDFKQDG DPNGKTLNIHNLCKFNFVNYNPVSGASLEIKSVVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21577; Mature: 21577
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKTLAFLSFFLFLTVWFGILGFAAIEKTSNSGLDLVKTSTWYIAGPALENQETINRIR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEECCCCCCHHHHHHHH KEKGIVKVTAKDNPIGEIELNVMITEADSNDGAPTNLSENSKYLSITYKSSHLIKIQARE HHCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECC GNAEGTGCIHGGSHPRVDLPVSAKKFTTIKIPWTDFKQDGDPNGKTLNIHNLCKFNFVNY CCCCCCEEEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEECCCC NPVSGASLEIKSVVIE CCCCCCCEEEEEEEEC >Mature Secondary Structure MKNKTLAFLSFFLFLTVWFGILGFAAIEKTSNSGLDLVKTSTWYIAGPALENQETINRIR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEECCCCCCHHHHHHHH KEKGIVKVTAKDNPIGEIELNVMITEADSNDGAPTNLSENSKYLSITYKSSHLIKIQARE HHCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECC GNAEGTGCIHGGSHPRVDLPVSAKKFTTIKIPWTDFKQDGDPNGKTLNIHNLCKFNFVNY CCCCCCEEEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEECCCC NPVSGASLEIKSVVIE CCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA