| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302691
Identifier: 146302691
GI number: 146302691
Start: 6000257
End: 6001636
Strand: Reverse
Name: 146302691
Synonym: Fjoh_4964
Alternate gene names: NA
Gene position: 6001636-6000257 (Counterclockwise)
Preceding gene: 146302692
Following gene: 146302690
Centisome position: 98.44
GC content: 36.09
Gene sequence:
>1380_bases ATGAAAAATAATCTACTATTTGTTTTCTTTTTAATGATTTGTGTTTCAGTAAAGGCAAATATTACGCTTCCTAATATTTT TGGAGATAATATGGTTTTACAGCGCAATTCTGAAGTTAAAATCTGGGGCTGGGCAAATCCAAAAGAAGAAATTAAACTAG TTTCGGGCTGGAACAATCAGGAATATAAAACCGTTGCCAATAATCAGGCGAAATGGGAACTGACTATTAAAACTCCTGAG GCGGGCGGACCTTATACAATTTCGATTAAAGGATATAATGAAGTTGTACTTAAAAATATTTTAATTGGAGAAGTCTGGGT TTGTTCCGGACAGTCGAATATGGAAATGTCGGCCAGCTGGGGAATCGAGAATGGCGATGAAGAAGTAAAAAATGCCGCAA ATTCGAATATTCGATTTTTTACGGTTTCAAAATCGACTGCCGTAACTCCGCAGAATAATGTATTGGGGAATTGGGTCGAA TCGACTCCGGAAACCATGAAGTATTTCAGTGCCGTTGGTTATTTTTTTGCCAAACGTTTGCGCGAAGATTTAAAAAATGT TCCAATTGGATTGATTTCTTCAAACTGGGGCGGAACTCCAGCCGAAATCTGGATGCCGGAAGAAGTCGTTCAAAATGATC CAGTTTTATTAGAAAATGCTAAGAAGTTAAATGAACAAGAATATGGACCACATCAGCCGGGACGTGCCTATAATGCTATG ATTGCTCCAATAACAGGATTTAAAATTGCAGGAACAATCTGGTATCAGGGCGAATCGAATGTGGGTTCTTTGGTTTACGA TAAAACGCTTTCAGCTTTGATTGCTTCATGGAGAAAAGCCTGGAATGATGAATTCCCTTTTTATTTTGTTCAGATTGCAC CTTATAAAAACGGAACAAATAATTTCTCGAACGTAACGGTTAGAAATTCTCAAAGAAAAATTTTAAAAGAAGTTCCAAAA ACAGGAATGGTTTTGACTTCTGACATTTCAGATACGATTGATATTCATCCAAAAAACAAAAAGTCGGTTGGAATTCGTCT GGCAGATCTGGCTTTGGCGGAAACGTACAAAACAAATCATAATTTGGTTAACGGACCGCTTTTTAAAGAAATTAAAACAA ATAAAAATAAAGTGACAGTCTCTTTTGATTACGCTGACGGATTATATTTTAAAAACAAAATTTCAAATCAATTTGAAGTT GCGGCAACTGATGGAGTTTTTTATCCAGCCGAAGCTTCAATTAAAAATAACGAGGTGATTTTGACAAGTAAAAAAGTATT TAATCCGGTAAAAGTGAGGTTTGCCTGGGGAAATACAATTCAGCCAGATTTGTTTAATAAAGCCAATCTGCCAGCTTCTT GTTTTACGTCAGAATTTTAG
Upstream 100 bases:
>100_bases TTTAAACCTATGACGCCAAAAGGCTGTACAGGTCATCCAGATGTTGCCGATCATAAAGTTCTGGCAGATGAATATGGACC ATTTTTAAAAAAGCTTTTAA
Downstream 100 bases:
>100_bases AATGTAGATTTTAGATTTTTTGCCCGCGGATTTTACTGATTGAACAGGTTAGCGCAGGTTTTTTGTTTGCTTTTGTCAGG CTGAGCGGAGTCGAAGCCCC
Product: sialate O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase; Sialate O-Acetylesterase Homolog; Glycosyl Hydrolase
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKNNLLFVFFLMICVSVKANITLPNIFGDNMVLQRNSEVKIWGWANPKEEIKLVSGWNNQEYKTVANNQAKWELTIKTPE AGGPYTISIKGYNEVVLKNILIGEVWVCSGQSNMEMSASWGIENGDEEVKNAANSNIRFFTVSKSTAVTPQNNVLGNWVE STPETMKYFSAVGYFFAKRLREDLKNVPIGLISSNWGGTPAEIWMPEEVVQNDPVLLENAKKLNEQEYGPHQPGRAYNAM IAPITGFKIAGTIWYQGESNVGSLVYDKTLSALIASWRKAWNDEFPFYFVQIAPYKNGTNNFSNVTVRNSQRKILKEVPK TGMVLTSDISDTIDIHPKNKKSVGIRLADLALAETYKTNHNLVNGPLFKEIKTNKNKVTVSFDYADGLYFKNKISNQFEV AATDGVFYPAEASIKNNEVILTSKKVFNPVKVRFAWGNTIQPDLFNKANLPASCFTSEF
Sequences:
>Translated_459_residues MKNNLLFVFFLMICVSVKANITLPNIFGDNMVLQRNSEVKIWGWANPKEEIKLVSGWNNQEYKTVANNQAKWELTIKTPE AGGPYTISIKGYNEVVLKNILIGEVWVCSGQSNMEMSASWGIENGDEEVKNAANSNIRFFTVSKSTAVTPQNNVLGNWVE STPETMKYFSAVGYFFAKRLREDLKNVPIGLISSNWGGTPAEIWMPEEVVQNDPVLLENAKKLNEQEYGPHQPGRAYNAM IAPITGFKIAGTIWYQGESNVGSLVYDKTLSALIASWRKAWNDEFPFYFVQIAPYKNGTNNFSNVTVRNSQRKILKEVPK TGMVLTSDISDTIDIHPKNKKSVGIRLADLALAETYKTNHNLVNGPLFKEIKTNKNKVTVSFDYADGLYFKNKISNQFEV AATDGVFYPAEASIKNNEVILTSKKVFNPVKVRFAWGNTIQPDLFNKANLPASCFTSEF >Mature_459_residues MKNNLLFVFFLMICVSVKANITLPNIFGDNMVLQRNSEVKIWGWANPKEEIKLVSGWNNQEYKTVANNQAKWELTIKTPE AGGPYTISIKGYNEVVLKNILIGEVWVCSGQSNMEMSASWGIENGDEEVKNAANSNIRFFTVSKSTAVTPQNNVLGNWVE STPETMKYFSAVGYFFAKRLREDLKNVPIGLISSNWGGTPAEIWMPEEVVQNDPVLLENAKKLNEQEYGPHQPGRAYNAM IAPITGFKIAGTIWYQGESNVGSLVYDKTLSALIASWRKAWNDEFPFYFVQIAPYKNGTNNFSNVTVRNSQRKILKEVPK TGMVLTSDISDTIDIHPKNKKSVGIRLADLALAETYKTNHNLVNGPLFKEIKTNKNKVTVSFDYADGLYFKNKISNQFEV AATDGVFYPAEASIKNNEVILTSKKVFNPVKVRFAWGNTIQPDLFNKANLPASCFTSEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=453, Percent_Identity=27.5938189845475, Blast_Score=145, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51529; Mature: 51529
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNLLFVFFLMICVSVKANITLPNIFGDNMVLQRNSEVKIWGWANPKEEIKLVSGWNNQ CCCCEEHHHHHHHHHHHCCCEEECCCCCCCEEEEECCEEEEEECCCCHHHEEEEECCCCC EYKTVANNQAKWELTIKTPEAGGPYTISIKGYNEVVLKNILIGEVWVCSGQSNMEMSASW CEEEECCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHEECEEEEECCCCCCEEEEEC GIENGDEEVKNAANSNIRFFTVSKSTAVTPQNNVLGNWVESTPETMKYFSAVGYFFAKRL CCCCCHHHHHHHCCCCEEEEEEECCEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH REDLKNVPIGLISSNWGGTPAEIWMPEEVVQNDPVLLENAKKLNEQEYGPHQPGRAYNAM HHHHHHCCEEEEECCCCCCCCEEECCHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCEE IAPITGFKIAGTIWYQGESNVGSLVYDKTLSALIASWRKAWNDEFPFYFVQIAPYKNGTN EEEECCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC NFSNVTVRNSQRKILKEVPKTGMVLTSDISDTIDIHPKNKKSVGIRLADLALAETYKTNH CCCEEEEECHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCCEEEEHHHHHHHHCCCC NLVNGPLFKEIKTNKNKVTVSFDYADGLYFKNKISNQFEVAATDGVFYPAEASIKNNEVI CCCCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCEEECCCCCCCCCEEE LTSKKVFNPVKVRFAWGNTIQPDLFNKANLPASCFTSEF EEEHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MKNNLLFVFFLMICVSVKANITLPNIFGDNMVLQRNSEVKIWGWANPKEEIKLVSGWNNQ CCCCEEHHHHHHHHHHHCCCEEECCCCCCCEEEEECCEEEEEECCCCHHHEEEEECCCCC EYKTVANNQAKWELTIKTPEAGGPYTISIKGYNEVVLKNILIGEVWVCSGQSNMEMSASW CEEEECCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHEECEEEEECCCCCCEEEEEC GIENGDEEVKNAANSNIRFFTVSKSTAVTPQNNVLGNWVESTPETMKYFSAVGYFFAKRL CCCCCHHHHHHHCCCCEEEEEEECCEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH REDLKNVPIGLISSNWGGTPAEIWMPEEVVQNDPVLLENAKKLNEQEYGPHQPGRAYNAM HHHHHHCCEEEEECCCCCCCCEEECCHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCCEE IAPITGFKIAGTIWYQGESNVGSLVYDKTLSALIASWRKAWNDEFPFYFVQIAPYKNGTN EEEECCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC NFSNVTVRNSQRKILKEVPKTGMVLTSDISDTIDIHPKNKKSVGIRLADLALAETYKTNH CCCEEEEECHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCCEEEEHHHHHHHHCCCC NLVNGPLFKEIKTNKNKVTVSFDYADGLYFKNKISNQFEVAATDGVFYPAEASIKNNEVI CCCCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCEEECCCCCCCCCEEE LTSKKVFNPVKVRFAWGNTIQPDLFNKANLPASCFTSEF EEEHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA