| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bglX [H]
Identifier: 146302690
GI number: 146302690
Start: 5997566
End: 5999863
Strand: Reverse
Name: bglX [H]
Synonym: Fjoh_4963
Alternate gene names: 146302690
Gene position: 5999863-5997566 (Counterclockwise)
Preceding gene: 146302691
Following gene: 146302687
Centisome position: 98.41
GC content: 37.6
Gene sequence:
>2298_bases ATGAAAAATAAAAAAATAATAATTATTGGGGTTTTGTCCCTGTTTACTGTTGGAAATATGAATGCACAAAAAAAGCCGTA TTTGGATAAAAACAAAACTATTGAGCAAAGAATTGATTTGCTTTTGCCTTTGATGACTTTGGAGGAGAAAGTGGGGCAGA TGAACCAATATAACGGTTTTTGGGACGTAACGGGACCAGCTCCAAAAGGCGGAACAGCTGAATTAAAATACGAACATTTA AGAAAAGGATTAGTCGGTTCAATGTTAACAGTTCGCGGTGTAAAAGAAGTTCGTGCCGTGCAGAAGATTGCAGTTGAAGA AACGCGTTTGGGAATTCCGTTAATTATTGGTTTTGATGTAATACATGGTTATAAAACGTTAAGTCCAATTCCGTTAGCAG AAGCGGCAAGTTGGGATTTAGAAGCAATTAAAAAGTCGGCTGCAATTGCGGCAGATGAAGCTTCGGCATCTGGAATTAAC TGGACATTTGGACCAAATGTAGATGTGGCAAATGATGCGCGCTGGGGACGTGTGATGGAAGGCGCGGGAGAAGATCCGTA TTTAGGAAGTAAAGTTGGTTACGCAAGGGTAAAAGGTTTTCAAGGAGAAACTGTTGCTGATTTGGCTAAAGTAAATACAA TTGCGGCTTGTGCGAAACACTTTGCAGCGTATGGTTATGTTGAAGCTGGTTTGGAATACAACATCGTTGATATTAGTAAT TCTAAATTGTACAATTCAGTTTTGCCTCCTTTTGAAGCGACGGTTGAAGCTGGAGTTCGCACGTTTATGAATTCGTTTAA TACTTTGAATGGTGTTCCTGCAACGGGAAATGCTTTCTTGCAAAGAGATATTTTAAAAGGAAAATGGAAGTTTGATGGTT TTGTAATTTCTGATTATGCTTCGATTCGCGAAATGATTGCACACGGTTATGCAAAAGACGAAGCTGATGCAACGGCAAAA GCGGTAATTGCAGGTTCTGATATGGATATGGAATCGTATTTATATGTGGCAAAACTGGTTGATTTGGTAAAATCTGGAAA AGTAAAAGAAGCTTTGGTTGATGATGCTGTTCGCAGAATTTTGCGTGTGAAATTTGAATTGGGATTATTTGATGACCCGT ACCGATATTGTGATGAAAAACGCGAAAAAGAAGTTGTTGGAAGTAAAGTCAATAACGAAGGCGTTTTGGATATGGCAAAG AAATCTATCGTTTTATTGAAGAACGAAAATAATCTGCTTCCGTTAAAGAAATCAGGGCAGAAAATCGCTTTGATTGGTGC TTTGGCAAATGATAAAAACAGTCCGTTGGGAAGCTGGAGAATTGCGGCTTCTGATGATACTGCTGTTTCGGTTTTAGAAG GAATGCAGCAATATAAAGACAATCAGCTGACTTTTGAAAAAGGAGTTGATTTACTAAAACAAAAAGCGACTTTCTTAACT GAAACAGTTTTTAACACAACAGACAAAAGCGGATTTGAAGCGGCTAAAAAAGTAGCAAAAAATGCCGATGTTGTGGTTAT GGTTTTAGGTGAATACGGTTTCCAGAGCGGTGAGGGAAGAAGCCGTACTGATTTAAACCTGCCTGGTTTGCAACAAGAAT TATTAGAAGAAATTTATAAAGTAAATCCAAACGTGGTTTTGGTTTTAAATAATGGTCGTCCGTTGAGTATTCCGTGGGCA GCAGAAAATGTTCCGGCAATTGTAGAAGCTTGGCATTTAGGAACGCAGACTGGAAATGCTGTTGCACAAGTTTTATACGG AGATTATAACCCAAGCGGAAAACTGCCAATGTCGTTTCCTAGAAATGTAGGTCAGGTTCCAATTTACTATAACAAATACA GTACAGGAAGACCAATTGACAGTGATAAAAATGTTTTTTGGTCGCATTATATGGATGTGGAGAAAACGCCTCAGTTTCCG TTTGGTTTTGGATTGAGTTACACGACTTTTGATTATAAAAACCTGAAACTAAATAAAACATCTTTTGCAAAAGGAGAAAA GGTTCAGGTAAGCGTTGAGGTTACCAACTCAGGGAATTATGATGGAAAAGAAGTGGTGCAATTGTATATTCACGATGAAT ATGCAAGTATCGTTCGTCCAATAAAAGAACTAAAAGGTTTCGAATTGGTTAACCTGAAAAAAGGTGAAACTAAAACGGTA ACTTTTACTTTAACGGATAAAGAACTTGGTTTTTATAATAACGAAGGAACTTATTTAGTAGAACCGGGAACTTTTAAAAT TATAGTTGGAGGAAGCTCTGATAAAGGTTTGCAAAGTGGTTTTGAGATAAAAGAATAG
Upstream 100 bases:
>100_bases CTTGAAACGGATAGCCCGACCCGGAGGGACACGCCCAAAACGTTAACCTTAGAATCTTAGTATCTCAGCACCTTAGAAGC TTAAAAAAAACTAACTAACC
Downstream 100 bases:
>100_bases TTTTTTTGAGGTTAAAAGGGGCAAAGGGACAAAGTTTCAAAGTTTTTTTGAATAGCCCCTAGCTTCAGCTAAGGTAATTA AGATTTGAATAGAAAAAGGC
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MKNKKIIIIGVLSLFTVGNMNAQKKPYLDKNKTIEQRIDLLLPLMTLEEKVGQMNQYNGFWDVTGPAPKGGTAELKYEHL RKGLVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIIGFDVIHGYKTLSPIPLAEAASWDLEAIKKSAAIAADEASASGIN WTFGPNVDVANDARWGRVMEGAGEDPYLGSKVGYARVKGFQGETVADLAKVNTIAACAKHFAAYGYVEAGLEYNIVDISN SKLYNSVLPPFEATVEAGVRTFMNSFNTLNGVPATGNAFLQRDILKGKWKFDGFVISDYASIREMIAHGYAKDEADATAK AVIAGSDMDMESYLYVAKLVDLVKSGKVKEALVDDAVRRILRVKFELGLFDDPYRYCDEKREKEVVGSKVNNEGVLDMAK KSIVLLKNENNLLPLKKSGQKIALIGALANDKNSPLGSWRIAASDDTAVSVLEGMQQYKDNQLTFEKGVDLLKQKATFLT ETVFNTTDKSGFEAAKKVAKNADVVVMVLGEYGFQSGEGRSRTDLNLPGLQQELLEEIYKVNPNVVLVLNNGRPLSIPWA AENVPAIVEAWHLGTQTGNAVAQVLYGDYNPSGKLPMSFPRNVGQVPIYYNKYSTGRPIDSDKNVFWSHYMDVEKTPQFP FGFGLSYTTFDYKNLKLNKTSFAKGEKVQVSVEVTNSGNYDGKEVVQLYIHDEYASIVRPIKELKGFELVNLKKGETKTV TFTLTDKELGFYNNEGTYLVEPGTFKIIVGGSSDKGLQSGFEIKE
Sequences:
>Translated_765_residues MKNKKIIIIGVLSLFTVGNMNAQKKPYLDKNKTIEQRIDLLLPLMTLEEKVGQMNQYNGFWDVTGPAPKGGTAELKYEHL RKGLVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIIGFDVIHGYKTLSPIPLAEAASWDLEAIKKSAAIAADEASASGIN WTFGPNVDVANDARWGRVMEGAGEDPYLGSKVGYARVKGFQGETVADLAKVNTIAACAKHFAAYGYVEAGLEYNIVDISN SKLYNSVLPPFEATVEAGVRTFMNSFNTLNGVPATGNAFLQRDILKGKWKFDGFVISDYASIREMIAHGYAKDEADATAK AVIAGSDMDMESYLYVAKLVDLVKSGKVKEALVDDAVRRILRVKFELGLFDDPYRYCDEKREKEVVGSKVNNEGVLDMAK KSIVLLKNENNLLPLKKSGQKIALIGALANDKNSPLGSWRIAASDDTAVSVLEGMQQYKDNQLTFEKGVDLLKQKATFLT ETVFNTTDKSGFEAAKKVAKNADVVVMVLGEYGFQSGEGRSRTDLNLPGLQQELLEEIYKVNPNVVLVLNNGRPLSIPWA AENVPAIVEAWHLGTQTGNAVAQVLYGDYNPSGKLPMSFPRNVGQVPIYYNKYSTGRPIDSDKNVFWSHYMDVEKTPQFP FGFGLSYTTFDYKNLKLNKTSFAKGEKVQVSVEVTNSGNYDGKEVVQLYIHDEYASIVRPIKELKGFELVNLKKGETKTV TFTLTDKELGFYNNEGTYLVEPGTFKIIVGGSSDKGLQSGFEIKE >Mature_765_residues MKNKKIIIIGVLSLFTVGNMNAQKKPYLDKNKTIEQRIDLLLPLMTLEEKVGQMNQYNGFWDVTGPAPKGGTAELKYEHL RKGLVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIIGFDVIHGYKTLSPIPLAEAASWDLEAIKKSAAIAADEASASGIN WTFGPNVDVANDARWGRVMEGAGEDPYLGSKVGYARVKGFQGETVADLAKVNTIAACAKHFAAYGYVEAGLEYNIVDISN SKLYNSVLPPFEATVEAGVRTFMNSFNTLNGVPATGNAFLQRDILKGKWKFDGFVISDYASIREMIAHGYAKDEADATAK AVIAGSDMDMESYLYVAKLVDLVKSGKVKEALVDDAVRRILRVKFELGLFDDPYRYCDEKREKEVVGSKVNNEGVLDMAK KSIVLLKNENNLLPLKKSGQKIALIGALANDKNSPLGSWRIAASDDTAVSVLEGMQQYKDNQLTFEKGVDLLKQKATFLT ETVFNTTDKSGFEAAKKVAKNADVVVMVLGEYGFQSGEGRSRTDLNLPGLQQELLEEIYKVNPNVVLVLNNGRPLSIPWA AENVPAIVEAWHLGTQTGNAVAQVLYGDYNPSGKLPMSFPRNVGQVPIYYNKYSTGRPIDSDKNVFWSHYMDVEKTPQFP FGFGLSYTTFDYKNLKLNKTSFAKGEKVQVSVEVTNSGNYDGKEVVQLYIHDEYASIVRPIKELKGFELVNLKKGETKTV TFTLTDKELGFYNNEGTYLVEPGTFKIIVGGSSDKGLQSGFEIKE
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=737, Percent_Identity=41.6553595658073, Blast_Score=565, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 84270; Mature: 84270
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKKIIIIGVLSLFTVGNMNAQKKPYLDKNKTIEQRIDLLLPLMTLEEKVGQMNQYNGF CCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCE WDVTGPAPKGGTAELKYEHLRKGLVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIIGFDV EECCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH IHGYKTLSPIPLAEAASWDLEAIKKSAAIAADEASASGINWTFGPNVDVANDARWGRVME HHCHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCCCCCHHHC GAGEDPYLGSKVGYARVKGFQGETVADLAKVNTIAACAKHFAAYGYVEAGLEYNIVDISN CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC SKLYNSVLPPFEATVEAGVRTFMNSFNTLNGVPATGNAFLQRDILKGKWKFDGFVISDYA CHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCEEEEHHH SIREMIAHGYAKDEADATAKAVIAGSDMDMESYLYVAKLVDLVKSGKVKEALVDDAVRRI HHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LRVKFELGLFDDPYRYCDEKREKEVVGSKVNNEGVLDMAKKSIVLLKNENNLLPLKKSGQ HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCEECCCCCCC KIALIGALANDKNSPLGSWRIAASDDTAVSVLEGMQQYKDNQLTFEKGVDLLKQKATFLT EEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH ETVFNTTDKSGFEAAKKVAKNADVVVMVLGEYGFQSGEGRSRTDLNLPGLQQELLEEIYK HHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VNPNVVLVLNNGRPLSIPWAAENVPAIVEAWHLGTQTGNAVAQVLYGDYNPSGKLPMSFP CCCCEEEEECCCCEEECCCCCCCCCHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCC RNVGQVPIYYNKYSTGRPIDSDKNVFWSHYMDVEKTPQFPFGFGLSYTTFDYKNLKLNKT CCCCCCEEEEECCCCCCCCCCCCCEEEHEECCCCCCCCCCCCCCCCEEEEECCCEEECCC SFAKGEKVQVSVEVTNSGNYDGKEVVQLYIHDEYASIVRPIKELKGFELVNLKKGETKTV CCCCCCEEEEEEEEECCCCCCHHHEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCEEE TFTLTDKELGFYNNEGTYLVEPGTFKIIVGGSSDKGLQSGFEIKE EEEEECCCCCEECCCCCEEECCCEEEEEEECCCCCCHHCCCCCCC >Mature Secondary Structure MKNKKIIIIGVLSLFTVGNMNAQKKPYLDKNKTIEQRIDLLLPLMTLEEKVGQMNQYNGF CCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCE WDVTGPAPKGGTAELKYEHLRKGLVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIIGFDV EECCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH IHGYKTLSPIPLAEAASWDLEAIKKSAAIAADEASASGINWTFGPNVDVANDARWGRVME HHCHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCCCCCHHHC GAGEDPYLGSKVGYARVKGFQGETVADLAKVNTIAACAKHFAAYGYVEAGLEYNIVDISN CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC SKLYNSVLPPFEATVEAGVRTFMNSFNTLNGVPATGNAFLQRDILKGKWKFDGFVISDYA CHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCEEEEHHH SIREMIAHGYAKDEADATAKAVIAGSDMDMESYLYVAKLVDLVKSGKVKEALVDDAVRRI HHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LRVKFELGLFDDPYRYCDEKREKEVVGSKVNNEGVLDMAKKSIVLLKNENNLLPLKKSGQ HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCEECCCCCCC KIALIGALANDKNSPLGSWRIAASDDTAVSVLEGMQQYKDNQLTFEKGVDLLKQKATFLT EEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH ETVFNTTDKSGFEAAKKVAKNADVVVMVLGEYGFQSGEGRSRTDLNLPGLQQELLEEIYK HHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VNPNVVLVLNNGRPLSIPWAAENVPAIVEAWHLGTQTGNAVAQVLYGDYNPSGKLPMSFP CCCCEEEEECCCCEEECCCCCCCCCHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCC RNVGQVPIYYNKYSTGRPIDSDKNVFWSHYMDVEKTPQFPFGFGLSYTTFDYKNLKLNKT CCCCCCEEEEECCCCCCCCCCCCCEEEHEECCCCCCCCCCCCCCCCEEEEECCCEEECCC SFAKGEKVQVSVEVTNSGNYDGKEVVQLYIHDEYASIVRPIKELKGFELVNLKKGETKTV CCCCCCEEEEEEEEECCCCCCHHHEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCEEE TFTLTDKELGFYNNEGTYLVEPGTFKIIVGGSSDKGLQSGFEIKE EEEEECCCCCEECCCCCEEECCCEEEEEEECCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]