Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302609

Identifier: 146302609

GI number: 146302609

Start: 5905002

End: 5905565

Strand: Direct

Name: 146302609

Synonym: Fjoh_4882

Alternate gene names: NA

Gene position: 5905002-5905565 (Clockwise)

Preceding gene: 146302608

Following gene: 146302610

Centisome position: 96.85

GC content: 37.23

Gene sequence:

>564_bases
ATGCTAGAAATTTTAAAAGAACCATGGCCTTGGTACGTAGCTGGCCCGCTAATTGGATTAACAGTTCCAATTTTATTAAT
TATCGGGAATAAATCTTTCGGGATTAGTTCGTCTCTGCGACATATTTGTGCGGCTTGTATTCCGTCGAATATTTCATTTT
TTAAATACGACTGGAAAAAAGAAAGCTGGAATTTATTCTTTGTTTTCGGAATATTTCTGGGCGGTGTAATCGCTGCTTAT
TTGTTATCTAATCCAAATCCGGTAGAAATTACTCCGGAACTTTCAGAACAATTGGCTTCTTACGGAATTACAGATCATAC
TGGTTTAGTTCCGGTACAGCTGTTTTCATGGGAAAGTTTGTTTACTCTTCGCGGATTTATTATGATGGTCGTGGGCGGAT
TTTTAGTTGGTTTTGGAACGCGTTATGCTGGCGGATGTACAAGCGGACATGCAATTATGGGAATTTCAAATTTACAATGG
CCTTCAGTCGTAGCTACAATTTGTTTTATGATTGGCGGTTTTGTAATGTCACTTTTGATTTTACCATATATTCTTTCACT
TTAA

Upstream 100 bases:

>100_bases
AATATTAAAATAATTTTTGAGGTACAGAGGTTCAAAGGTGCAAAGCGACAAAGTTTTCCCTTTGAACCTCTGTACCTTTG
AACCTTTGAACCTAAAAAAT

Downstream 100 bases:

>100_bases
AATTTTTAAAATGAGTAATTTAGAAAATAAAAATACAGACAACGAAGGAATCAACGCAAGTCATAAAAAAGAAACAGCAT
TCGCAAACCTTAAATATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLEILKEPWPWYVAGPLIGLTVPILLIIGNKSFGISSSLRHICAACIPSNISFFKYDWKKESWNLFFVFGIFLGGVIAAY
LLSNPNPVEITPELSEQLASYGITDHTGLVPVQLFSWESLFTLRGFIMMVVGGFLVGFGTRYAGGCTSGHAIMGISNLQW
PSVVATICFMIGGFVMSLLILPYILSL

Sequences:

>Translated_187_residues
MLEILKEPWPWYVAGPLIGLTVPILLIIGNKSFGISSSLRHICAACIPSNISFFKYDWKKESWNLFFVFGIFLGGVIAAY
LLSNPNPVEITPELSEQLASYGITDHTGLVPVQLFSWESLFTLRGFIMMVVGGFLVGFGTRYAGGCTSGHAIMGISNLQW
PSVVATICFMIGGFVMSLLILPYILSL
>Mature_187_residues
MLEILKEPWPWYVAGPLIGLTVPILLIIGNKSFGISSSLRHICAACIPSNISFFKYDWKKESWNLFFVFGIFLGGVIAAY
LLSNPNPVEITPELSEQLASYGITDHTGLVPVQLFSWESLFTLRGFIMMVVGGFLVGFGTRYAGGCTSGHAIMGISNLQW
PSVVATICFMIGGFVMSLLILPYILSL

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20505; Mature: 20505

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEILKEPWPWYVAGPLIGLTVPILLIIGNKSFGISSSLRHICAACIPSNISFFKYDWKK
CCCCCCCCCCCEEHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
ESWNLFFVFGIFLGGVIAAYLLSNPNPVEITPELSEQLASYGITDHTGLVPVQLFSWESL
CCCCEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCCCCCCCEEEECCHHHH
FTLRGFIMMVVGGFLVGFGTRYAGGCTSGHAIMGISNLQWPSVVATICFMIGGFVMSLLI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LPYILSL
HHHHHCC
>Mature Secondary Structure
MLEILKEPWPWYVAGPLIGLTVPILLIIGNKSFGISSSLRHICAACIPSNISFFKYDWKK
CCCCCCCCCCCEEHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
ESWNLFFVFGIFLGGVIAAYLLSNPNPVEITPELSEQLASYGITDHTGLVPVQLFSWESL
CCCCEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCCCCCCCEEEECCHHHH
FTLRGFIMMVVGGFLVGFGTRYAGGCTSGHAIMGISNLQWPSVVATICFMIGGFVMSLLI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LPYILSL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA