| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302610
Identifier: 146302610
GI number: 146302610
Start: 5905576
End: 5906055
Strand: Direct
Name: 146302610
Synonym: Fjoh_4883
Alternate gene names: NA
Gene position: 5905576-5906055 (Clockwise)
Preceding gene: 146302609
Following gene: 146302611
Centisome position: 96.86
GC content: 37.29
Gene sequence:
>480_bases ATGAGTAATTTAGAAAATAAAAATACAGACAACGAAGGAATCAACGCAAGTCATAAAAAAGAAACAGCATTCGCAAACCT TAAATATTTAATCGTTGGCATCTTTTTCGGAATTGTATTCGTAAAAGCCGAAATCATCAGCTGGTTTCGTATTCAGGAAA TGTTTCATTTGCAGTCATTCCACATGTATGGTGTAATTGGAAGTGCAGTTGCGGTTGGAGTAATTTCAGTATTCCTAATT AAAAAATTAAACATCAAAACCCTTCAGGGCGAAAAAATCGAAATTCAGCCTAAAACTTTCAATAAAGGACAAATCTACGG AGGCCTGATGTTTGGTTTTGGATGGGCAATTACAGGAGCTTGTCCGGGGCCTCTTTTTGCTCAAATTGGTACTGGAGCAA CAGTAATCGTGGTAACTTTGGTAAGTGCCATTGCAGGAACCTGGGTTTATGGTTTGATAAAAGACAAACTGCCTCATTAA
Upstream 100 bases:
>100_bases CAATGGCCTTCAGTCGTAGCTACAATTTGTTTTATGATTGGCGGTTTTGTAATGTCACTTTTGATTTTACCATATATTCT TTCACTTTAAAATTTTTAAA
Downstream 100 bases:
>100_bases TTTTTTATATAATCCAAAAAATGAATTCTACTCAACAATTAGTTTTACGAAAAGCAGTTATTTCTGAAGTACCTGTTATT TGGGAAATACTGCAGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSNLENKNTDNEGINASHKKETAFANLKYLIVGIFFGIVFVKAEIISWFRIQEMFHLQSFHMYGVIGSAVAVGVISVFLI KKLNIKTLQGEKIEIQPKTFNKGQIYGGLMFGFGWAITGACPGPLFAQIGTGATVIVVTLVSAIAGTWVYGLIKDKLPH
Sequences:
>Translated_159_residues MSNLENKNTDNEGINASHKKETAFANLKYLIVGIFFGIVFVKAEIISWFRIQEMFHLQSFHMYGVIGSAVAVGVISVFLI KKLNIKTLQGEKIEIQPKTFNKGQIYGGLMFGFGWAITGACPGPLFAQIGTGATVIVVTLVSAIAGTWVYGLIKDKLPH >Mature_158_residues SNLENKNTDNEGINASHKKETAFANLKYLIVGIFFGIVFVKAEIISWFRIQEMFHLQSFHMYGVIGSAVAVGVISVFLIK KLNIKTLQGEKIEIQPKTFNKGQIYGGLMFGFGWAITGACPGPLFAQIGTGATVIVVTLVSAIAGTWVYGLIKDKLPH
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17395; Mature: 17264
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLENKNTDNEGINASHKKETAFANLKYLIVGIFFGIVFVKAEIISWFRIQEMFHLQSF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMYGVIGSAVAVGVISVFLIKKLNIKTLQGEKIEIQPKTFNKGQIYGGLMFGFGWAITGA HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCEEHHHHHHHHHHCCCC CPGPLFAQIGTGATVIVVTLVSAIAGTWVYGLIKDKLPH CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNLENKNTDNEGINASHKKETAFANLKYLIVGIFFGIVFVKAEIISWFRIQEMFHLQSF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMYGVIGSAVAVGVISVFLIKKLNIKTLQGEKIEIQPKTFNKGQIYGGLMFGFGWAITGA HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCEEHHHHHHHHHHCCCC CPGPLFAQIGTGATVIVVTLVSAIAGTWVYGLIKDKLPH CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA