| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302313
Identifier: 146302313
GI number: 146302313
Start: 5545274
End: 5548042
Strand: Direct
Name: 146302313
Synonym: Fjoh_4586
Alternate gene names: NA
Gene position: 5545274-5548042 (Clockwise)
Preceding gene: 146302305
Following gene: 146302314
Centisome position: 90.95
GC content: 34.42
Gene sequence:
>2769_bases TTGATTATTTTTGCCAAAAAATTATATGTAAGTTTGACATGTCAAAAAACAAGCCATAATTTTACAAAAATAGTATTTAA ACCTTTGCATACAAACTTATTTAATATCGTTTTAATATCATTTTTCCTAACAATAGGATGTGGTAAATCATATTCGCAAG AGATAAAACCTAAAAAAAAATCTTTACCTGCTGTAAAACAAACAAATAAGCCGGCTACTGCTCCTGCAGCAGCAACGCCC GCAGTTTCTACAGCAACTGTTGATACTATAAAGATAGACAGTATTAAGCCTAAAAAACAGTTTCTTGACGCTCCTACTAA ATATAAAGCAAAAGATTATGCAAAGTACGACAAGAAAAACAAATTGCTTACTTTATATAATGAAGCTGAACTTTACTATA AAGATGTAGAGTTAAAATCTGGTATCATTATCTTAAATCTTGAAAAAGATGAAGTGTATGCCGGAAGAATAAAAGATTCT GCAGGCGTTTTGGTGCAGTATCCAAACTTTAAACAGGGGACAAATGAAGTACAGCCGGATTCTATCCGCTTTAATTTTAA AACTAAAAAAGCTTTAATTTATAATTCCAGAACAAAACAAGGTGAATTAAACATCAAGGCTTCTGTTACTAAAAAAGAAA ATGATTCTGTATACTTCTTAAAAGGAGCACGTATTACAACTGCTCAGGATATTGACAATCCTGAATACTATTTTCAAACC AGCAGAATTAAATTTGTACCCGGTAAAAAAATCGTTGCCGGTTTAACACAAATGGTAATTGCTGATGTTCCTACTCCACT TGCTTTACCTTACGGTTTTTTCCCTTTAAGTAAAGAAAAAAGCGTTTCAGGTATTATTATTCCAAGTTATAACGATTCAA ATACAAGAGGATTTTCTCTTCAAAATGGAGGATATTACTTTGCATTGAGCGATAATTATGATTTAACTGTTTTAGGAGAT TATTATACCAATGGTAGTTACGCCATGAGGTTTGAGTCTGCTTATGCAAAGAGATACAAATATCGAGGAAATATTAACGT TCGTTTTGAAAACCTGATAAACAGCGAAAGAGGTTATCCTGATTATTCAAAGCAAAACATTTACAACATTCAGTGGTCGC ACTCTAAAGATACTAAATCAAACCCTAACTCGACTTTTTCAGCTTCTGTGAATATGGGTAGTAGTAAGTACTTTAAGCGA TCTATAAATCAGGCTAATATTGGATCGAACTTAAATAATACTTTGAGTTCGTCTATTTCATACAATAAAACCTTTAATAC TATTCCGGGATCGCGAATCTCTCTTTCTGCCACACACCAGCAAAATACGCAGACAGAAGAGATTTTAATGACGCTTCCTA ATTTCCAGGGTAGTATTGACCGTATTTATCCTTTTGTGGGTGAAAACGGCGTTAAAAAAGGTTTCTTTAAAAACATCAAC CTGCAGTATAATGTAACAGGTAAGAATAACTTTAAAACAACCGATTCATTATTTTTTAAACCGCAGATGTTTAGAGATGC TCAAATTGGTATGCAGCACAGTATTCCTATCAGCACCAACTTTAAAATTTTCAAATATTTTAGTGCCGGAGCATCTACAA ATTATCAGGAAACATGGGTTACCAAAACGATTGATAAAAATTATGATGCCAGCAAAGGCCAAGTAGCCAGCACAACCGTA AATGGTTTTGATGCATTTAGAACTTATAATTTCAGCACCAATTTAGGAACTACCATTTATGGTACTTTTAATTTTGGAAC TGACAAAAAAATACAATCTATCCGCCACGTCATGAGACCGAGTATTACATACTCTTATACTCCAAGTTTTGAAAGGTATT ACGATCATTATACTGTAGATGCTGCGGGAAGAATTTCAACAGATGAATATACGAGGTTCGAAAACGGTATTTATGGCGCT CCTGGTAAAGAAAACTCTAACATTGTAGGTTTCTCATTAAGTAACACTTTTGAAGCTAAAGTAAGAGACAGCGACAGTAC AAAAACTGAACCTAAAAAAATTATGCTGCTGAACAATTTAAACTTCAGCACGAGCTATAATTTTAATGCCAACGGAAAAG AAACTTTAGCCTGGCAGCCAATTATCGTAAGCGGTGGAACTCAGTTTTTTGAAAATAAAATGAATGTCAATTTTGGAGCT GTTTTAAATCCTTATGCTATTGACAATGCCGGAAATGTGATAAACATGTACAACATTGAAAATGGCGGAAGTTTATTTAG AATGACGAGTGCCAACATAACAATGAATTACTCGTTTTCGAACAAAGGAACCGGAAAGGAAAAAAACACCCAGAGTCAGC GAAATGGTGGTCGTAATGACGACTTATTCGGGACCAACACTGATTTAAATGACAGCCGAAACAGCCAGTTTGCAAACGAT CCAGATCGCGAAGAAGATGTTATAACTGAATTTTTCAGTTCAAAACTGCCGTGGGACATGACAATGGCATATTCTCTTAC CTACTCTAATGCAAACCGCGAGAATAAAATAACCGGAAACTCAATTATGATTTCTGCCAATATGGATATTACTCCTAAAT GGAAAGGCGGGGTTTCTACTGGTTTTGACTTTGTTCAAAAGGGTGTTACTTTTACTCAGTTCCGTTTTGAAAGAGACTTA TTAAGCTGGAGAATGGCATTTAACTGGCAGCCTATGGGAACAAGTTCAAACTGGAACTTCTTCATAGGAATTAAATCTGG TATGCTTAGTGACATTAAATGGAACAAACGAAGCACTATAAATCGATAA
Upstream 100 bases:
>100_bases TATCGTTAGAAAAAAAGTAAAGATTACCTTAATTTTGTTTAAACCATTCATAAATCTAAAAGTTAATTTTAATAAAATGC AGCTGTTATAATTTTTACAA
Downstream 100 bases:
>100_bases TTCATCGACTTAAAATAATTTTATCATGAAAAAAATAATCTTTACAGAAAAGGCTCCGGCTCCTATTGGTCCTTATAATC AAGCCGTTTTATCAGGAAAC
Product: organic solvent tolerance protein OstA-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 922; Mature: 922
Protein sequence:
>922_residues MIIFAKKLYVSLTCQKTSHNFTKIVFKPLHTNLFNIVLISFFLTIGCGKSYSQEIKPKKKSLPAVKQTNKPATAPAAATP AVSTATVDTIKIDSIKPKKQFLDAPTKYKAKDYAKYDKKNKLLTLYNEAELYYKDVELKSGIIILNLEKDEVYAGRIKDS AGVLVQYPNFKQGTNEVQPDSIRFNFKTKKALIYNSRTKQGELNIKASVTKKENDSVYFLKGARITTAQDIDNPEYYFQT SRIKFVPGKKIVAGLTQMVIADVPTPLALPYGFFPLSKEKSVSGIIIPSYNDSNTRGFSLQNGGYYFALSDNYDLTVLGD YYTNGSYAMRFESAYAKRYKYRGNINVRFENLINSERGYPDYSKQNIYNIQWSHSKDTKSNPNSTFSASVNMGSSKYFKR SINQANIGSNLNNTLSSSISYNKTFNTIPGSRISLSATHQQNTQTEEILMTLPNFQGSIDRIYPFVGENGVKKGFFKNIN LQYNVTGKNNFKTTDSLFFKPQMFRDAQIGMQHSIPISTNFKIFKYFSAGASTNYQETWVTKTIDKNYDASKGQVASTTV NGFDAFRTYNFSTNLGTTIYGTFNFGTDKKIQSIRHVMRPSITYSYTPSFERYYDHYTVDAAGRISTDEYTRFENGIYGA PGKENSNIVGFSLSNTFEAKVRDSDSTKTEPKKIMLLNNLNFSTSYNFNANGKETLAWQPIIVSGGTQFFENKMNVNFGA VLNPYAIDNAGNVINMYNIENGGSLFRMTSANITMNYSFSNKGTGKEKNTQSQRNGGRNDDLFGTNTDLNDSRNSQFAND PDREEDVITEFFSSKLPWDMTMAYSLTYSNANRENKITGNSIMISANMDITPKWKGGVSTGFDFVQKGVTFTQFRFERDL LSWRMAFNWQPMGTSSNWNFFIGIKSGMLSDIKWNKRSTINR
Sequences:
>Translated_922_residues MIIFAKKLYVSLTCQKTSHNFTKIVFKPLHTNLFNIVLISFFLTIGCGKSYSQEIKPKKKSLPAVKQTNKPATAPAAATP AVSTATVDTIKIDSIKPKKQFLDAPTKYKAKDYAKYDKKNKLLTLYNEAELYYKDVELKSGIIILNLEKDEVYAGRIKDS AGVLVQYPNFKQGTNEVQPDSIRFNFKTKKALIYNSRTKQGELNIKASVTKKENDSVYFLKGARITTAQDIDNPEYYFQT SRIKFVPGKKIVAGLTQMVIADVPTPLALPYGFFPLSKEKSVSGIIIPSYNDSNTRGFSLQNGGYYFALSDNYDLTVLGD YYTNGSYAMRFESAYAKRYKYRGNINVRFENLINSERGYPDYSKQNIYNIQWSHSKDTKSNPNSTFSASVNMGSSKYFKR SINQANIGSNLNNTLSSSISYNKTFNTIPGSRISLSATHQQNTQTEEILMTLPNFQGSIDRIYPFVGENGVKKGFFKNIN LQYNVTGKNNFKTTDSLFFKPQMFRDAQIGMQHSIPISTNFKIFKYFSAGASTNYQETWVTKTIDKNYDASKGQVASTTV NGFDAFRTYNFSTNLGTTIYGTFNFGTDKKIQSIRHVMRPSITYSYTPSFERYYDHYTVDAAGRISTDEYTRFENGIYGA PGKENSNIVGFSLSNTFEAKVRDSDSTKTEPKKIMLLNNLNFSTSYNFNANGKETLAWQPIIVSGGTQFFENKMNVNFGA VLNPYAIDNAGNVINMYNIENGGSLFRMTSANITMNYSFSNKGTGKEKNTQSQRNGGRNDDLFGTNTDLNDSRNSQFAND PDREEDVITEFFSSKLPWDMTMAYSLTYSNANRENKITGNSIMISANMDITPKWKGGVSTGFDFVQKGVTFTQFRFERDL LSWRMAFNWQPMGTSSNWNFFIGIKSGMLSDIKWNKRSTINR >Mature_922_residues MIIFAKKLYVSLTCQKTSHNFTKIVFKPLHTNLFNIVLISFFLTIGCGKSYSQEIKPKKKSLPAVKQTNKPATAPAAATP AVSTATVDTIKIDSIKPKKQFLDAPTKYKAKDYAKYDKKNKLLTLYNEAELYYKDVELKSGIIILNLEKDEVYAGRIKDS AGVLVQYPNFKQGTNEVQPDSIRFNFKTKKALIYNSRTKQGELNIKASVTKKENDSVYFLKGARITTAQDIDNPEYYFQT SRIKFVPGKKIVAGLTQMVIADVPTPLALPYGFFPLSKEKSVSGIIIPSYNDSNTRGFSLQNGGYYFALSDNYDLTVLGD YYTNGSYAMRFESAYAKRYKYRGNINVRFENLINSERGYPDYSKQNIYNIQWSHSKDTKSNPNSTFSASVNMGSSKYFKR SINQANIGSNLNNTLSSSISYNKTFNTIPGSRISLSATHQQNTQTEEILMTLPNFQGSIDRIYPFVGENGVKKGFFKNIN LQYNVTGKNNFKTTDSLFFKPQMFRDAQIGMQHSIPISTNFKIFKYFSAGASTNYQETWVTKTIDKNYDASKGQVASTTV NGFDAFRTYNFSTNLGTTIYGTFNFGTDKKIQSIRHVMRPSITYSYTPSFERYYDHYTVDAAGRISTDEYTRFENGIYGA PGKENSNIVGFSLSNTFEAKVRDSDSTKTEPKKIMLLNNLNFSTSYNFNANGKETLAWQPIIVSGGTQFFENKMNVNFGA VLNPYAIDNAGNVINMYNIENGGSLFRMTSANITMNYSFSNKGTGKEKNTQSQRNGGRNDDLFGTNTDLNDSRNSQFAND PDREEDVITEFFSSKLPWDMTMAYSLTYSNANRENKITGNSIMISANMDITPKWKGGVSTGFDFVQKGVTFTQFRFERDL LSWRMAFNWQPMGTSSNWNFFIGIKSGMLSDIKWNKRSTINR
Specific function: Unknown
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104267; Mature: 104267
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIFAKKLYVSLTCQKTSHNFTKIVFKPLHTNLFNIVLISFFLTIGCGKSYSQEIKPKKK CEEEEEEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHH SLPAVKQTNKPATAPAAATPAVSTATVDTIKIDSIKPKKQFLDAPTKYKAKDYAKYDKKN CCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCHHHHHHCCCC KLLTLYNEAELYYKDVELKSGIIILNLEKDEVYAGRIKDSAGVLVQYPNFKQGTNEVQPD CEEEEEECCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCCC SIRFNFKTKKALIYNSRTKQGELNIKASVTKKENDSVYFLKGARITTAQDIDNPEYYFQT EEEEEEEECEEEEECCCCCCCEEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCEEEEE SRIKFVPGKKIVAGLTQMVIADVPTPLALPYGFFPLSKEKSVSGIIIPSYNDSNTRGFSL CEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE QNGGYYFALSDNYDLTVLGDYYTNGSYAMRFESAYAKRYKYRGNINVRFENLINSERGYP ECCCEEEEEECCCCEEEEECEECCCCEEEEEHHHHHHHEEECCCEEEEEHHHHCCCCCCC DYSKQNIYNIQWSHSKDTKSNPNSTFSASVNMGSSKYFKRSINQANIGSNLNNTLSSSIS CCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHCCEE YNKTFNTIPGSRISLSATHQQNTQTEEILMTLPNFQGSIDRIYPFVGENGVKKGFFKNIN CCCEECCCCCCEEEEEECCCCCCCCHHHEEECCCCCCCHHHEEEECCCCCCCCCCEECCE LQYNVTGKNNFKTTDSLFFKPQMFRDAQIGMQHSIPISTNFKIFKYFSAGASTNYQETWV EEEEECCCCCCCCCCEEEECCHHHCHHHCCCEECCCCCCCCEEEEEEECCCCCCCCCEEE TKTIDKNYDASKGQVASTTVNGFDAFRTYNFSTNLGTTIYGTFNFGTDKKIQSIRHVMRP EEECCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHCC SITYSYTPSFERYYDHYTVDAAGRISTDEYTRFENGIYGAPGKENSNIVGFSLSNTFEAK CEEEEECCCHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEE VRDSDSTKTEPKKIMLLNNLNFSTSYNFNANGKETLAWQPIIVSGGTQFFENKMNVNFGA EECCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEEEECCHHHHHCCCCCEECC VLNPYAIDNAGNVINMYNIENGGSLFRMTSANITMNYSFSNKGTGKEKNTQSQRNGGRND EECCEEECCCCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHCCCCCC DLFGTNTDLNDSRNSQFANDPDREEDVITEFFSSKLPWDMTMAYSLTYSNANRENKITGN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEECCC SIMISANMDITPKWKGGVSTGFDFVQKGVTFTQFRFERDLLSWRMAFNWQPMGTSSNWNF EEEEEECCCCCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHEEEEEEEEEECCCCCCCEE FIGIKSGMLSDIKWNKRSTINR EEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIIFAKKLYVSLTCQKTSHNFTKIVFKPLHTNLFNIVLISFFLTIGCGKSYSQEIKPKKK CEEEEEEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHH SLPAVKQTNKPATAPAAATPAVSTATVDTIKIDSIKPKKQFLDAPTKYKAKDYAKYDKKN CCCCHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCHHHHHHCCCC KLLTLYNEAELYYKDVELKSGIIILNLEKDEVYAGRIKDSAGVLVQYPNFKQGTNEVQPD CEEEEEECCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCCC SIRFNFKTKKALIYNSRTKQGELNIKASVTKKENDSVYFLKGARITTAQDIDNPEYYFQT EEEEEEEECEEEEECCCCCCCEEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCEEEEE SRIKFVPGKKIVAGLTQMVIADVPTPLALPYGFFPLSKEKSVSGIIIPSYNDSNTRGFSL CEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE QNGGYYFALSDNYDLTVLGDYYTNGSYAMRFESAYAKRYKYRGNINVRFENLINSERGYP ECCCEEEEEECCCCEEEEECEECCCCEEEEEHHHHHHHEEECCCEEEEEHHHHCCCCCCC DYSKQNIYNIQWSHSKDTKSNPNSTFSASVNMGSSKYFKRSINQANIGSNLNNTLSSSIS CCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHCCEE YNKTFNTIPGSRISLSATHQQNTQTEEILMTLPNFQGSIDRIYPFVGENGVKKGFFKNIN CCCEECCCCCCEEEEEECCCCCCCCHHHEEECCCCCCCHHHEEEECCCCCCCCCCEECCE LQYNVTGKNNFKTTDSLFFKPQMFRDAQIGMQHSIPISTNFKIFKYFSAGASTNYQETWV EEEEECCCCCCCCCCEEEECCHHHCHHHCCCEECCCCCCCCEEEEEEECCCCCCCCCEEE TKTIDKNYDASKGQVASTTVNGFDAFRTYNFSTNLGTTIYGTFNFGTDKKIQSIRHVMRP EEECCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHCC SITYSYTPSFERYYDHYTVDAAGRISTDEYTRFENGIYGAPGKENSNIVGFSLSNTFEAK CEEEEECCCHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEE VRDSDSTKTEPKKIMLLNNLNFSTSYNFNANGKETLAWQPIIVSGGTQFFENKMNVNFGA EECCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEEEECCHHHHHCCCCCEECC VLNPYAIDNAGNVINMYNIENGGSLFRMTSANITMNYSFSNKGTGKEKNTQSQRNGGRND EECCEEECCCCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHCCCCCC DLFGTNTDLNDSRNSQFANDPDREEDVITEFFSSKLPWDMTMAYSLTYSNANRENKITGN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEECCC SIMISANMDITPKWKGGVSTGFDFVQKGVTFTQFRFERDLLSWRMAFNWQPMGTSSNWNF EEEEEECCCCCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHEEEEEEEEEECCCCCCCEE FIGIKSGMLSDIKWNKRSTINR EEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA