Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302305

Identifier: 146302305

GI number: 146302305

Start: 5537788

End: 5538285

Strand: Direct

Name: 146302305

Synonym: Fjoh_4578

Alternate gene names: NA

Gene position: 5537788-5538285 (Clockwise)

Preceding gene: 146302304

Following gene: 146302313

Centisome position: 90.83

GC content: 38.96

Gene sequence:

>498_bases
ATGAAGAAGATAATAGTATCTGCCATTATGCTTTTTGGATTTGCATTTACGGCACAATCACAAGAAATTTCAAAACACGC
TCTAGGATTGCGTTTAGGAGACAACAACGGATTTGGAGGTGAAGTATCATACCAATTAGGACTAAACCAAAAAAACAGAC
TTGAATTTGATTTAGGCTGGAGAAACAGCAGCGACGTTGATGCCATTAAAGGAGTTGCTCTTTACCAATGGGTTTGGAAC
ATCGACGGCGGATTTAACTGGTACGCTGGTGTTGGGGGTGGATTAGCTGCCTGGGACCACGATTATTACAACAACAATTA
CAGATATAACGACAGCGGAACATATGTTTTTGCAGCCGGAGATATTGGTATAGAATATAGATTTAAGGAAGTGCCTATTA
CACTGTCATTAGATGCAAGACCTGAAATTGGTTCTGGATACTATGACGATGACAATTTTGGATTTGACGTTGGATTAGGA
GTTAAATTCAGATTTTAA

Upstream 100 bases:

>100_bases
AAATTCTAAAAAATGTGAATTATATAACAATTTCTAAAAATATTATACGTTCTTCATATACAAGGAAATCTAAATTTGAA
AAAAATTAATTAACCATTTT

Downstream 100 bases:

>100_bases
TTAAAAATAAAAAATAATTGTAAGAAGAAACCTGTCGCTTTTAAACGACAGGTTTTTTTTATGTTTTAAAATAAAATGTA
TGAGGCTGAGCAAATTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKKIIVSAIMLFGFAFTAQSQEISKHALGLRLGDNNGFGGEVSYQLGLNQKNRLEFDLGWRNSSDVDAIKGVALYQWVWN
IDGGFNWYAGVGGGLAAWDHDYYNNNYRYNDSGTYVFAAGDIGIEYRFKEVPITLSLDARPEIGSGYYDDDNFGFDVGLG
VKFRF

Sequences:

>Translated_165_residues
MKKIIVSAIMLFGFAFTAQSQEISKHALGLRLGDNNGFGGEVSYQLGLNQKNRLEFDLGWRNSSDVDAIKGVALYQWVWN
IDGGFNWYAGVGGGLAAWDHDYYNNNYRYNDSGTYVFAAGDIGIEYRFKEVPITLSLDARPEIGSGYYDDDNFGFDVGLG
VKFRF
>Mature_165_residues
MKKIIVSAIMLFGFAFTAQSQEISKHALGLRLGDNNGFGGEVSYQLGLNQKNRLEFDLGWRNSSDVDAIKGVALYQWVWN
IDGGFNWYAGVGGGLAAWDHDYYNNNYRYNDSGTYVFAAGDIGIEYRFKEVPITLSLDARPEIGSGYYDDDNFGFDVGLG
VKFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18474; Mature: 18474

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIVSAIMLFGFAFTAQSQEISKHALGLRLGDNNGFGGEVSYQLGLNQKNRLEFDLGW
CHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECC
RNSSDVDAIKGVALYQWVWNIDGGFNWYAGVGGGLAAWDHDYYNNNYRYNDSGTYVFAAG
CCCCCCHHHCCEEEEEEEEECCCCEEEEECCCCCEEECCCCCCCCCEEECCCCCEEEEEC
DIGIEYRFKEVPITLSLDARPEIGSGYYDDDNFGFDVGLGVKFRF
CCCEEEEEEECCEEEEECCCCCCCCCEECCCCCCEEECEEEEEEC
>Mature Secondary Structure
MKKIIVSAIMLFGFAFTAQSQEISKHALGLRLGDNNGFGGEVSYQLGLNQKNRLEFDLGW
CHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECC
RNSSDVDAIKGVALYQWVWNIDGGFNWYAGVGGGLAAWDHDYYNNNYRYNDSGTYVFAAG
CCCCCCHHHCCEEEEEEEEECCCCEEEEECCCCCEEECCCCCCCCCEEECCCCCEEEEEC
DIGIEYRFKEVPITLSLDARPEIGSGYYDDDNFGFDVGLGVKFRF
CCCEEEEEEECCEEEEECCCCCCCCCEECCCCCCEEECEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA