Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302238

Identifier: 146302238

GI number: 146302238

Start: 5448386

End: 5451133

Strand: Direct

Name: 146302238

Synonym: Fjoh_4511

Alternate gene names: NA

Gene position: 5448386-5451133 (Clockwise)

Preceding gene: 146302237

Following gene: 146302239

Centisome position: 89.36

GC content: 33.22

Gene sequence:

>2748_bases
ATGGAAGTGGCGGTTAATCTTGAACTCAAAACACTAAACGTAAAACAGGATATTACCTATTTAAATACTTCAAATGATAC
TTTGGTTTCAATTGTTTTAAACGACTGGAACAATGCTTTTTCAGATAGAAATACACCTTTAGCAAAACGTTTTTCTGATG
AATTTTATCGCGGTTTTCATTTGGCAAAAACTGTAGAAAAAGGAAACACCACAATTTTAAATCTGACCGATTCAAACTTT
ACGGCTCTTGAATGGGAAAGAACAGAGAAAAATCCGGATTTTATCGTTATACGGCTGAATAAAAAACTTCTCCCTGGCGA
ACAAATTGATCTGCATATTACCTACATTTCAAAAATTCCAAGTGATAAATTCACCCATTATGGATTTGACCAAAACGGGA
TGAACTTAAAAAACTGGTTCCTGACCCCTGCCCGCTTTGAAAATCATGATTTTGTAAAATACAACAACTTTAATCTTGAT
GATATTGCAAATGCCGAAGCTGATTATAAACTTGAAATAAAAGTACCAAACAATTACTCTATTATAACCGATTTAAATTC
GGTTTCAAAAGACAGTACTAATGCTGCTTACAGCACCTATTCGTTTGCAGGAAGTAACAGAACTGATTTTAACCTGTTTA
TTGAAAAACAAAACAATTTTAGAAGTTATAACAATGGGACAATTGAGGTTTTAACTGACTTGAAAAACAAGAAAATAACC
GAGATTCAAAAAGCAATTGTAATTAATCGCGTCGCTGCGTTTGCAAATGAATTTATTGGAAAATATCCGCATAAAAAAAT
CACGGTTTCGCAGGCAGATTATGAACGAAATCCTTTTTATGGACTAAATCAGCTTCCTTCTATAATTAGTCCGTTTTCAG
ATGAGTTTATGTTTGAAATTACTTTTTTCAAAACCTATCTCAACAATTATCTAAAAAACTCCCTCCGCCTTGACCCACGA
AAAGACAATTGGGTTTATGACGGAATCCAGATCTATGCCATGATGAAATACATGGAAGAATATCATCTGGATGAAAAAAT
GCTGGGCAGACTCTCGAGAATGAAACTTTTTAAAAGTTACAATATCACCAATTTGACTTTTAACGAGCAATACAGCTATT
ATTACATGCTTATGGCACGTAAAAATCTGGATCAGCCGCTTGGCGATCCAAAAAACACTTTAATAAAATTTAATGAGCAA
ATTGCGAGCAAATACCGCGCTGGTTTAAGTTTAAGCTATTTAGATGATTACCTGAACCATAATATTGTTCCCGAAAGTGT
TCAGGAATTTTATAATCTTAATAAATCACAGCAGACAAATCGTTATGATTTTGAAAAAATCTTAATTAAAAAAAGCCCTA
AAAATCTCGATTGGTTTTTTAATACCATAATCGATTCCAGAGAAATAATAGATTATAAATTTACAAACGTATCGAGAACT
GCCGACAGCGTTCAGTTTTCAATAAAAAGCAAAACTGACATTTATGCGCCTATTCCGGTTTACGGCCTTAAAAAAAATAA
AATTGTTTTTAAAGAATGGATTGAACCGAAACAACCAGATTCTGTTTACCAGTTCAGCCGAAAAAATGCTGATAAATTAG
TTATCAATTACGATAACGAAGTTCCAGAATTCAATCAAAGAAACAACTGGAAATCATTAAAAAGTCTGGCAATCACAAAT
CGCCCAATCAAATTTAATTTTGCAAAAGATTTAGAAGATCCTTATTACAATCAGATTTTATATATACCAACCCTGACCTA
TAATTACTACGATGGTTTTACGCCCGGAGTACGTTTTCATAATAAAACGATTTTAGATAAACCGTTTACGTTTGATATTA
ATCCTGCTTATTCTTTAAAAGCCGGGACATTATCTGGTTCATCTGCTTTTGCTTGGAGTCAGTATTACCGAAACAGTACT
TTATATAATGTAAGATATTCTCTAAGCCAGAACTATTTTCATTATGCACCGGATGCTACTTATTTGAGACTGAATCCTAT
GGTGCAATTTCGAATTCGTGAGGAGAATTTTAGAGACAACAGGAAACAGCTTATTATGTTTCGTCAGGTAATTGTAAATC
GTGAAGCCAGCGAATTTATTACAGACAATTCAAAACCAAATTATTCAATTTTTAATGCGCGGTATGCCAATACTAAAACA
GAATTGGTCGATCATTTTAATTTTATGACCGATGTTCAGTTTTCAAGCGGTTTTGGAAAAGCCTCCGCTGAAGTAGAATA
CAGAAGATTATTTGAAAACAACCGAAAGTTAAACCTGAGAGTATTTGCCGGAAGTTTTATTTACAACACAACAAATTCAG
ATTATTTTAGTTTTGGTTTAGACAAGCCGACTGATTATTTGTTTGATTACAATATTCTGGGAAGATCAGAAACTACAGGT
ATTTTCAGCCAGCAGTATGTAATTGCCGAAGGAGGTTTTAAATCTAAACTGAATCCTGCATTTGCAAACCAATGGATGGC
GACTGTAAATGCCAGTTACGCACTATGGAACTGGATTGAGGTTTATGGCGATGCTGGTTTTTTAAAAAATAAACATCAAA
AAGAGTACTTCGCTTACGACAGCGGCATACGCTTAAACCTTGTTCCTGATTATTTTGAGCTTTATTTTCCAGTTTACTCA
AATAACGGATGGGAAATATCACAAAATAAATACAACGAAAAAATTAGATTTGTGATAACTTTTTCTCCTAAAACATTAGT
CACTCTTTTCACTCGAAAATGGTTTTAA

Upstream 100 bases:

>100_bases
ATAATTTTTAAGCCAATTCTTGAAATCATTCTATAAAATTATAATCATAATTTTTGCTTTATTGAATTCGATAAAGCAAT
ATGCACAACATCAGTCTAAG

Downstream 100 bases:

>100_bases
TTGAATAAATTTTAATCAAAAACATAAATAATTATCAGAAAAAGAACAAAAACAATGAAAATAACACAAATAAAATACAT
AGTTTTTTGGTTTTAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Metalloprotease; Peptidase

Number of amino acids: Translated: 915; Mature: 915

Protein sequence:

>915_residues
MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFHLAKTVEKGNTTILNLTDSNF
TALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIPSDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLD
DIANAEADYKLEIKVPNNYSIITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT
EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEITFFKTYLNNYLKNSLRLDPR
KDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSYNITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQ
IASKYRAGLSLSYLDDYLNHNIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT
ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNEVPEFNQRNNWKSLKSLAITN
RPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFHNKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNST
LYNVRYSLSQNYFHYAPDATYLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT
ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGLDKPTDYLFDYNILGRSETTG
IFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIEVYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYS
NNGWEISQNKYNEKIRFVITFSPKTLVTLFTRKWF

Sequences:

>Translated_915_residues
MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFHLAKTVEKGNTTILNLTDSNF
TALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIPSDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLD
DIANAEADYKLEIKVPNNYSIITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT
EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEITFFKTYLNNYLKNSLRLDPR
KDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSYNITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQ
IASKYRAGLSLSYLDDYLNHNIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT
ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNEVPEFNQRNNWKSLKSLAITN
RPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFHNKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNST
LYNVRYSLSQNYFHYAPDATYLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT
ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGLDKPTDYLFDYNILGRSETTG
IFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIEVYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYS
NNGWEISQNKYNEKIRFVITFSPKTLVTLFTRKWF
>Mature_915_residues
MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFHLAKTVEKGNTTILNLTDSNF
TALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIPSDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLD
DIANAEADYKLEIKVPNNYSIITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT
EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEITFFKTYLNNYLKNSLRLDPR
KDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSYNITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQ
IASKYRAGLSLSYLDDYLNHNIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT
ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNEVPEFNQRNNWKSLKSLAITN
RPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFHNKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNST
LYNVRYSLSQNYFHYAPDATYLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT
ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGLDKPTDYLFDYNILGRSETTG
IFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIEVYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYS
NNGWEISQNKYNEKIRFVITFSPKTLVTLFTRKWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 107800; Mature: 107800

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFH
CEEEEEEEEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LAKTVEKGNTTILNLTDSNFTALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIP
HHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCC
SDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLDDIANAEADYKLEIKVPNNYS
CCCCEECCCCCCCCCCHHEEECCCCCCCCCEEEECCCCHHHHCCCCCCEEEEEEECCCCE
IITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT
EEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCHHH
EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEH
TFFKTYLNNYLKNSLRLDPRKDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSY
HHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
NITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQIASKYRAGLSLSYLDDYLNH
CEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHEEECHHHHHHHHCCCCHHHHHHHHCC
NIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT
CCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCC
ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNE
CCCEEEEEECCCCEEECCCCEECCCCCEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCC
VPEFNQRNNWKSLKSLAITNRPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFH
CCCCCCCCCHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEC
NKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNSTLYNVRYSLSQNYFHYAPDAT
CCEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCEEEECCCCE
YLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT
EEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCHH
ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGL
HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCEEEECC
DKPTDYLFDYNILGRSETTGIFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIE
CCCCCEEEEEEEECCCCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
VYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYSNNGWEISQNKYNEKIRFVIT
HHCCCCHHCCCCCCCEEEECCCCEEEECCCCEEEEEEEECCCCEEECCCCCCCEEEEEEE
FSPKTLVTLFTRKWF
ECCCCEEHHHHHCCC
>Mature Secondary Structure
MEVAVNLELKTLNVKQDITYLNTSNDTLVSIVLNDWNNAFSDRNTPLAKRFSDEFYRGFH
CEEEEEEEEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LAKTVEKGNTTILNLTDSNFTALEWERTEKNPDFIVIRLNKKLLPGEQIDLHITYISKIP
HHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCC
SDKFTHYGFDQNGMNLKNWFLTPARFENHDFVKYNNFNLDDIANAEADYKLEIKVPNNYS
CCCCEECCCCCCCCCCHHEEECCCCCCCCCEEEECCCCHHHHCCCCCCEEEEEEECCCCE
IITDLNSVSKDSTNAAYSTYSFAGSNRTDFNLFIEKQNNFRSYNNGTIEVLTDLKNKKIT
EEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCHHH
EIQKAIVINRVAAFANEFIGKYPHKKITVSQADYERNPFYGLNQLPSIISPFSDEFMFEI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEH
TFFKTYLNNYLKNSLRLDPRKDNWVYDGIQIYAMMKYMEEYHLDEKMLGRLSRMKLFKSY
HHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
NITNLTFNEQYSYYYMLMARKNLDQPLGDPKNTLIKFNEQIASKYRAGLSLSYLDDYLNH
CEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHEEECHHHHHHHHCCCCHHHHHHHHCC
NIVPESVQEFYNLNKSQQTNRYDFEKILIKKSPKNLDWFFNTIIDSREIIDYKFTNVSRT
CCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCC
ADSVQFSIKSKTDIYAPIPVYGLKKNKIVFKEWIEPKQPDSVYQFSRKNADKLVINYDNE
CCCEEEEEECCCCEEECCCCEECCCCCEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCC
VPEFNQRNNWKSLKSLAITNRPIKFNFAKDLEDPYYNQILYIPTLTYNYYDGFTPGVRFH
CCCCCCCCCHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEC
NKTILDKPFTFDINPAYSLKAGTLSGSSAFAWSQYYRNSTLYNVRYSLSQNYFHYAPDAT
CCEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCEEEECCCCE
YLRLNPMVQFRIREENFRDNRKQLIMFRQVIVNREASEFITDNSKPNYSIFNARYANTKT
EEEECCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCHH
ELVDHFNFMTDVQFSSGFGKASAEVEYRRLFENNRKLNLRVFAGSFIYNTTNSDYFSFGL
HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCEEEECC
DKPTDYLFDYNILGRSETTGIFSQQYVIAEGGFKSKLNPAFANQWMATVNASYALWNWIE
CCCCCEEEEEEEECCCCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
VYGDAGFLKNKHQKEYFAYDSGIRLNLVPDYFELYFPVYSNNGWEISQNKYNEKIRFVIT
HHCCCCHHCCCCCCCEEEECCCCEEEECCCCEEEEEEEECCCCEEECCCCCCCEEEEEEE
FSPKTLVTLFTRKWF
ECCCCEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA