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The map label for this gene is cirA [C]

Identifier: 146302220

GI number: 146302220

Start: 5420153

End: 5422528

Strand: Reverse

Name: cirA [C]

Synonym: Fjoh_4493

Alternate gene names: 146302220

Gene position: 5422528-5420153 (Counterclockwise)

Preceding gene: 146302224

Following gene: 146302218

Centisome position: 88.94

GC content: 34.01

Gene sequence:

>2376_bases
ATGAAAACAGTAATAACCAGTATTTTAATTTTATTAATTCCTATGCTTGGCCTTTCACAGCAAACAGTTGTTTCGGGTAA
AGTTCAGGATAATGCAAATAAAGAAGCAATTCCTTATGCAACAGTGTCAATACAAGACAGCACATTAAAAACATTGGCAG
TTGGTGTAACGGATGATAAAGGTGATTTTGTTTTTGAAAAACTGCCAAATGGCAAAATGACAATCACTTTTAGTTACATT
GGATATCAAAATTACAGCCGAACATTTGAAATCATTTCGGGCAGGCCAAAAATTGAATTAGGCACAATTGATTTACATAC
CGATGCAGTACAATTAAATGCCGTTGAAATTACGGGACAAAAATCGAGTGTGAGCTTAAAACTTGATAAAAAAGTTTTTG
AAGTTGGTAAAGATGTGCTTTCGCAGAATGGTTCTGCACATGATGTTTTAAATAGCGTTCCCTCTGTAACTGTTAGTCCG
ACTGGCGGTGTAAGTCTTCGTGGCAACAGCAGTGTTCTGGTGTTAATTAACGGAAGACAATCTGGTTTAACACAAAATAA
TGCCCTTGACCAAATTGCAGCCGATCAAATTGAACGTATTGAGGTAATAACCAATCCTTCATCTCGATATGATGCTTCCG
GTTCGGCAGGGATTATTAATATTATTTTAAAGCGAAACAAAAAAAGCGGTTTTAGCGGTCAGGTTCGATTAGTGGCCGGA
TCTCCAAATGACAGCCGTTTAAATCCAAGCATCAATTTTAAATCAGATAAAATCAATATTTTTTCAAATTTTGGGATACG
TTCTTCGGACTATGTTGGTTTATATACCACAAACCAGACTACTACAGATAATGGTAAATCAAATTATTTAAACCGAGTGC
AAAACGAGGATCGTCATGACGATGGAAAATTAATGTATTTTGGAGCCGATTATTATATAGATGAACATCGAACTATTACA
GCTGCGTTTTTAAAAAATGCTACAGAAGATGATGATAAAACTCATTTATTATACAATTACAGTCAGGCCGAAAATGTAAA
AGACAGCGTTTTAGCAAGAGAAGGAAAATCATTAGAAAAAAGAGATTACAACCAATTAGAATTTAATTATACCCAGACTT
TTAAACGTCCGGCAAAAAAATGGACAATTGATGTTCAGTATGATTGGTGGAACAGCGATAAAAACTGGAATCTTTCGACA
CAGCGTTTGTATCCAGAAACATTGGCTTATCCCGGTATTCGGACTAATTCAGTAGGAAATAGTAAAGATCTGCTCGTTCA
GAGTGATTTTGTACAGCCGATAGATACAATTTCGACATTTGAAGTTGGTGTTAAAACGGAGATACGTAAAGTTTCCAGTC
AATTTTTGGCAGAACAGCAAGAAGATGATATTTGGAAAATCTATCAAAATATTGATAACGACTTAAAGTATACAGAAACA
ATTGCCAGCGGATATGCACAATACAGCAGTAAAATTAAACGATTCAGCTATATGTTTGGACTGCGAACAGAGTTTACCAA
AATTTCGATTACAGATAGTAAAAACACATATAGTGATGATAAAAATTATAATAGACTATTTCCTAGCGTTAATTTGAGCT
ATAAGTTTGATGCATCAACTTTACAGTTAAATTACAGTAAGCGCATCAATCGTCCGCCTTTATATGCTTTATATCCTTTT
AATGAAGTAACAGATTTAAATGCACAATATGTTGGAAATCCAGATCTTAATCCATCTTATACAGATGTTTTTGAGCTGGC
TTTTCTTAAAACATGGAAAAAATTTACTTTAAATCCGTCTGTTTATTACCAGTGGGAAAGCGGTTATATACAAGATTTTA
CCTATCGTGAAAACAATATTTTTTATACAACACCCATTAATATTCAACATGAAATACGAAGCGGTATTGAACTTTCAACC
TTATATAATCCTGCAAAATGGCTTCAGGTAAATATGGAAATGAATTTTTATCATTTTAAACAAAAAGGAAGTTATCAGGA
TGAAGACCTTAATTATGAAGGAAAGACTTTTACCGGACGTTTAAACACACAGATTAAACTGCCTGCAAAATTTAGTTTTC
AGGGACGTTACAATTTTCGCGGAGCGCAGCAAAATGCACAAACCAAAAATGATCCCCTGCAATCGCTTGATTTTGGGTTA
AGTAAAGTTTTATTGAAAGATAAAGCGACTATTGTATTTGATGTTACAAATGCATTTGATCTGCGTCAAAACAAAAGCAC
TACAATTGGTGACAATTATTATCTAAATGTGAATAGCATACCTAATGCGGCACGCTACAGACTTAGTTTTGTGTATCGTT
TTAACTTAACAGATCCAAAAGGAATTAGACAAGCAAATAACGCGAATCGCAATTAA

Upstream 100 bases:

>100_bases
AATTGCGAAGTGCATTTCAAAAGCTCTTAGAGCCGTTTGAATGTTTTAAAGAACACTGGTTTGTTTTATAAAGTAATCTT
GTATCATAAAACCAATAAAC

Downstream 100 bases:

>100_bases
TCTTTCAGGTTTATAAAAAACATGCTTAAAAAATTAAGCATGTTTTTTATTTAGTTAAACTCCTGTTTTAACATTTATAG
GAGAGGTGTTATTAACCTTT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB-Dependent Receptor Exported Protein; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; Outer Membrane Receptor Family Transporter; Protein Containing nB-Dependent Receptor Plug Domain; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; NB-Dependent Receptor Plug Domain-Containing Protein; Outer Membrane Receptor Protein Mostly Fe Transport

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MKTVITSILILLIPMLGLSQQTVVSGKVQDNANKEAIPYATVSIQDSTLKTLAVGVTDDKGDFVFEKLPNGKMTITFSYI
GYQNYSRTFEIISGRPKIELGTIDLHTDAVQLNAVEITGQKSSVSLKLDKKVFEVGKDVLSQNGSAHDVLNSVPSVTVSP
TGGVSLRGNSSVLVLINGRQSGLTQNNALDQIAADQIERIEVITNPSSRYDASGSAGIINIILKRNKKSGFSGQVRLVAG
SPNDSRLNPSINFKSDKINIFSNFGIRSSDYVGLYTTNQTTTDNGKSNYLNRVQNEDRHDDGKLMYFGADYYIDEHRTIT
AAFLKNATEDDDKTHLLYNYSQAENVKDSVLAREGKSLEKRDYNQLEFNYTQTFKRPAKKWTIDVQYDWWNSDKNWNLST
QRLYPETLAYPGIRTNSVGNSKDLLVQSDFVQPIDTISTFEVGVKTEIRKVSSQFLAEQQEDDIWKIYQNIDNDLKYTET
IASGYAQYSSKIKRFSYMFGLRTEFTKISITDSKNTYSDDKNYNRLFPSVNLSYKFDASTLQLNYSKRINRPPLYALYPF
NEVTDLNAQYVGNPDLNPSYTDVFELAFLKTWKKFTLNPSVYYQWESGYIQDFTYRENNIFYTTPINIQHEIRSGIELST
LYNPAKWLQVNMEMNFYHFKQKGSYQDEDLNYEGKTFTGRLNTQIKLPAKFSFQGRYNFRGAQQNAQTKNDPLQSLDFGL
SKVLLKDKATIVFDVTNAFDLRQNKSTTIGDNYYLNVNSIPNAARYRLSFVYRFNLTDPKGIRQANNANRN

Sequences:

>Translated_791_residues
MKTVITSILILLIPMLGLSQQTVVSGKVQDNANKEAIPYATVSIQDSTLKTLAVGVTDDKGDFVFEKLPNGKMTITFSYI
GYQNYSRTFEIISGRPKIELGTIDLHTDAVQLNAVEITGQKSSVSLKLDKKVFEVGKDVLSQNGSAHDVLNSVPSVTVSP
TGGVSLRGNSSVLVLINGRQSGLTQNNALDQIAADQIERIEVITNPSSRYDASGSAGIINIILKRNKKSGFSGQVRLVAG
SPNDSRLNPSINFKSDKINIFSNFGIRSSDYVGLYTTNQTTTDNGKSNYLNRVQNEDRHDDGKLMYFGADYYIDEHRTIT
AAFLKNATEDDDKTHLLYNYSQAENVKDSVLAREGKSLEKRDYNQLEFNYTQTFKRPAKKWTIDVQYDWWNSDKNWNLST
QRLYPETLAYPGIRTNSVGNSKDLLVQSDFVQPIDTISTFEVGVKTEIRKVSSQFLAEQQEDDIWKIYQNIDNDLKYTET
IASGYAQYSSKIKRFSYMFGLRTEFTKISITDSKNTYSDDKNYNRLFPSVNLSYKFDASTLQLNYSKRINRPPLYALYPF
NEVTDLNAQYVGNPDLNPSYTDVFELAFLKTWKKFTLNPSVYYQWESGYIQDFTYRENNIFYTTPINIQHEIRSGIELST
LYNPAKWLQVNMEMNFYHFKQKGSYQDEDLNYEGKTFTGRLNTQIKLPAKFSFQGRYNFRGAQQNAQTKNDPLQSLDFGL
SKVLLKDKATIVFDVTNAFDLRQNKSTTIGDNYYLNVNSIPNAARYRLSFVYRFNLTDPKGIRQANNANRN
>Mature_791_residues
MKTVITSILILLIPMLGLSQQTVVSGKVQDNANKEAIPYATVSIQDSTLKTLAVGVTDDKGDFVFEKLPNGKMTITFSYI
GYQNYSRTFEIISGRPKIELGTIDLHTDAVQLNAVEITGQKSSVSLKLDKKVFEVGKDVLSQNGSAHDVLNSVPSVTVSP
TGGVSLRGNSSVLVLINGRQSGLTQNNALDQIAADQIERIEVITNPSSRYDASGSAGIINIILKRNKKSGFSGQVRLVAG
SPNDSRLNPSINFKSDKINIFSNFGIRSSDYVGLYTTNQTTTDNGKSNYLNRVQNEDRHDDGKLMYFGADYYIDEHRTIT
AAFLKNATEDDDKTHLLYNYSQAENVKDSVLAREGKSLEKRDYNQLEFNYTQTFKRPAKKWTIDVQYDWWNSDKNWNLST
QRLYPETLAYPGIRTNSVGNSKDLLVQSDFVQPIDTISTFEVGVKTEIRKVSSQFLAEQQEDDIWKIYQNIDNDLKYTET
IASGYAQYSSKIKRFSYMFGLRTEFTKISITDSKNTYSDDKNYNRLFPSVNLSYKFDASTLQLNYSKRINRPPLYALYPF
NEVTDLNAQYVGNPDLNPSYTDVFELAFLKTWKKFTLNPSVYYQWESGYIQDFTYRENNIFYTTPINIQHEIRSGIELST
LYNPAKWLQVNMEMNFYHFKQKGSYQDEDLNYEGKTFTGRLNTQIKLPAKFSFQGRYNFRGAQQNAQTKNDPLQSLDFGL
SKVLLKDKATIVFDVTNAFDLRQNKSTTIGDNYYLNVNSIPNAARYRLSFVYRFNLTDPKGIRQANNANRN

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90046; Mature: 90046

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVITSILILLIPMLGLSQQTVVSGKVQDNANKEAIPYATVSIQDSTLKTLAVGVTDDK
CHHHHHHHHHHHHHHCCCCCCCEEECEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCC
GDFVFEKLPNGKMTITFSYIGYQNYSRTFEIISGRPKIELGTIDLHTDAVQLNAVEITGQ
CCEEEEECCCCEEEEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCEEEEEEEEEECC
KSSVSLKLDKKVFEVGKDVLSQNGSAHDVLNSVPSVTVSPTGGVSLRGNSSVLVLINGRQ
CCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCEEEECCCEEEEEEECCC
SGLTQNNALDQIAADQIERIEVITNPSSRYDASGSAGIINIILKRNKKSGFSGQVRLVAG
CCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEC
SPNDSRLNPSINFKSDKINIFSNFGIRSSDYVGLYTTNQTTTDNGKSNYLNRVQNEDRHD
CCCCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC
DGKLMYFGADYYIDEHRTITAAFLKNATEDDDKTHLLYNYSQAENVKDSVLAREGKSLEK
CCEEEEEECCEEECCCCEEEEHHHCCCCCCCCCEEEEEECHHHCCHHHHHHHHCCCCCCC
RDYNQLEFNYTQTFKRPAKKWTIDVQYDWWNSDKNWNLSTQRLYPETLAYPGIRTNSVGN
CCCCEEEEEHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHCCCHHHHCCCCCEECCCCC
SKDLLVQSDFVQPIDTISTFEVGVKTEIRKVSSQFLAEQQEDDIWKIYQNIDNDLKYTET
CCCEEEECCCCCCHHCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH
IASGYAQYSSKIKRFSYMFGLRTEFTKISITDSKNTYSDDKNYNRLFPSVNLSYKFDAST
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHCCCCCCEEEEECCCE
LQLNYSKRINRPPLYALYPFNEVTDLNAQYVGNPDLNPSYTDVFELAFLKTWKKFTLNPS
EEEEHHHCCCCCCEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHEECCCE
VYYQWESGYIQDFTYRENNIFYTTPINIQHEIRSGIELSTLYNPAKWLQVNMEMNFYHFK
EEEEECCCCEEEEEEECCCEEEECCCCCHHHHHCCCEEEEECCCCEEEEEEEEEEEEEEE
QKGSYQDEDLNYEGKTFTGRLNTQIKLPAKFSFQGRYNFRGAQQNAQTKNDPLQSLDFGL
CCCCCCCCCCCCCCCEEEEEECEEEECCEEEEECCEECCCCCCCCCCCCCCCHHHHHHHH
SKVLLKDKATIVFDVTNAFDLRQNKSTTIGDNYYLNVNSIPNAARYRLSFVYRFNLTDPK
HHHHCCCCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCCCEEEEEEEEEEECCCCH
GIRQANNANRN
HHHHCCCCCCC
>Mature Secondary Structure
MKTVITSILILLIPMLGLSQQTVVSGKVQDNANKEAIPYATVSIQDSTLKTLAVGVTDDK
CHHHHHHHHHHHHHHCCCCCCCEEECEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCC
GDFVFEKLPNGKMTITFSYIGYQNYSRTFEIISGRPKIELGTIDLHTDAVQLNAVEITGQ
CCEEEEECCCCEEEEEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCEEEEEEEEEECC
KSSVSLKLDKKVFEVGKDVLSQNGSAHDVLNSVPSVTVSPTGGVSLRGNSSVLVLINGRQ
CCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCEEEECCCEEEEEEECCC
SGLTQNNALDQIAADQIERIEVITNPSSRYDASGSAGIINIILKRNKKSGFSGQVRLVAG
CCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEC
SPNDSRLNPSINFKSDKINIFSNFGIRSSDYVGLYTTNQTTTDNGKSNYLNRVQNEDRHD
CCCCCCCCCCEEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC
DGKLMYFGADYYIDEHRTITAAFLKNATEDDDKTHLLYNYSQAENVKDSVLAREGKSLEK
CCEEEEEECCEEECCCCEEEEHHHCCCCCCCCCEEEEEECHHHCCHHHHHHHHCCCCCCC
RDYNQLEFNYTQTFKRPAKKWTIDVQYDWWNSDKNWNLSTQRLYPETLAYPGIRTNSVGN
CCCCEEEEEHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHCCCHHHHCCCCCEECCCCC
SKDLLVQSDFVQPIDTISTFEVGVKTEIRKVSSQFLAEQQEDDIWKIYQNIDNDLKYTET
CCCEEEECCCCCCHHCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH
IASGYAQYSSKIKRFSYMFGLRTEFTKISITDSKNTYSDDKNYNRLFPSVNLSYKFDAST
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHCCCCCCEEEEECCCE
LQLNYSKRINRPPLYALYPFNEVTDLNAQYVGNPDLNPSYTDVFELAFLKTWKKFTLNPS
EEEEHHHCCCCCCEEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHEECCCE
VYYQWESGYIQDFTYRENNIFYTTPINIQHEIRSGIELSTLYNPAKWLQVNMEMNFYHFK
EEEEECCCCEEEEEEECCCEEEECCCCCHHHHHCCCEEEEECCCCEEEEEEEEEEEEEEE
QKGSYQDEDLNYEGKTFTGRLNTQIKLPAKFSFQGRYNFRGAQQNAQTKNDPLQSLDFGL
CCCCCCCCCCCCCCCEEEEEECEEEECCEEEEECCEECCCCCCCCCCCCCCCHHHHHHHH
SKVLLKDKATIVFDVTNAFDLRQNKSTTIGDNYYLNVNSIPNAARYRLSFVYRFNLTDPK
HHHHCCCCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCCCEEEEEEEEEEECCCCH
GIRQANNANRN
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA