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The map label for this gene is ykoG [H]

Identifier: 146302027

GI number: 146302027

Start: 5183959

End: 5184630

Strand: Direct

Name: ykoG [H]

Synonym: Fjoh_4291

Alternate gene names: 146302027

Gene position: 5183959-5184630 (Clockwise)

Preceding gene: 146302024

Following gene: 146302028

Centisome position: 85.03

GC content: 34.38

Gene sequence:

>672_bases
ATGAATGTTTTACTCATTGAAGATGATAAACGCATCAGCGAATTTATTATAAAAGGTTTAGAAGAAAACAACTTTACCGT
GCATCTGGCCGAAACTGGAGAGATGGCGCGCGACCTTGTACAAGAAAATACCTGGGATATTATTTTGATGGATATCATGC
TTCCGGGAATCGACGGTATTCAGCTTGTGAAATTAATGCGTTTTAAAAAGATTCATACTCCTATTTTAATCCTCAGTGCA
TTGAGTAATACTGATGATAAAGTCACAGCCTTAGATTCTGGCGCCGATGATTATCTTGTAAAACCTTTTCATTTTAAAGA
ACTCATTTCGAGAGTCAACGCGCTTACGCGAAGAACAAAATTCAATTATAATGAACCTGAAACTTTATATACCTGCGGTA
CTTTAACCATTAATCCAGACGAGCATAAAGTAACAGAAAATGACAAACTAATTGATCTTTCGCCAAGAGAATACAAACTG
CTTTTATATTTACTAGAAAACAGAAACAAAGTAATGTCGAGAACTCAGATTTTAACCGCTGTCTGGGGAATTAACTACGA
CAATAACACCAATGTTGTCGATGTGTATATTTCGTATTTAAGAAACAAAATCGAACACAATCATAAGTTCATTCACACCA
TAAAAGGAATTGGTTATATGTTAAAAGAATAA

Upstream 100 bases:

>100_bases
TAAATGTTATTTTTGATAATCTTTTCAAAAGCACTTTATCAGATTATTGGATTTAAGCATATCAGCTTTTATCTAAACAG
CAACACTTAACATAGCATCT

Downstream 100 bases:

>100_bases
GTATGAAAATTCGTGATCGTTTTACCTTAATTTCTTCTCTGACTTTCAGTGTTGTGTTTGTCATTGCTTCGCTTATTACC
TATTTTTCTTTCTACAGTTA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNVLLIEDDKRISEFIIKGLEENNFTVHLAETGEMARDLVQENTWDIILMDIMLPGIDGIQLVKLMRFKKIHTPILILSA
LSNTDDKVTALDSGADDYLVKPFHFKELISRVNALTRRTKFNYNEPETLYTCGTLTINPDEHKVTENDKLIDLSPREYKL
LLYLLENRNKVMSRTQILTAVWGINYDNNTNVVDVYISYLRNKIEHNHKFIHTIKGIGYMLKE

Sequences:

>Translated_223_residues
MNVLLIEDDKRISEFIIKGLEENNFTVHLAETGEMARDLVQENTWDIILMDIMLPGIDGIQLVKLMRFKKIHTPILILSA
LSNTDDKVTALDSGADDYLVKPFHFKELISRVNALTRRTKFNYNEPETLYTCGTLTINPDEHKVTENDKLIDLSPREYKL
LLYLLENRNKVMSRTQILTAVWGINYDNNTNVVDVYISYLRNKIEHNHKFIHTIKGIGYMLKE
>Mature_223_residues
MNVLLIEDDKRISEFIIKGLEENNFTVHLAETGEMARDLVQENTWDIILMDIMLPGIDGIQLVKLMRFKKIHTPILILSA
LSNTDDKVTALDSGADDYLVKPFHFKELISRVNALTRRTKFNYNEPETLYTCGTLTINPDEHKVTENDKLIDLSPREYKL
LLYLLENRNKVMSRTQILTAVWGINYDNNTNVVDVYISYLRNKIEHNHKFIHTIKGIGYMLKE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=38.3928571428571, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=39.3665158371041, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=35.1351351351351, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=35.7142857142857, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=33.6322869955157, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=32.579185520362, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=31.25, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=26.8722466960352, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=30.6306306306306, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=29.4642857142857, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=32.0175438596491, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=27.5555555555556, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=29.4372294372294, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=28.8135593220339, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=33.0188679245283, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790299, Length=123, Percent_Identity=32.520325203252, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1790437, Length=166, Percent_Identity=27.710843373494, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25913; Mature: 25913

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLLIEDDKRISEFIIKGLEENNFTVHLAETGEMARDLVQENTWDIILMDIMLPGIDGI
CEEEEEECCHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCEEEEEECCCCCCHH
QLVKLMRFKKIHTPILILSALSNTDDKVTALDSGADDYLVKPFHFKELISRVNALTRRTK
HHHHHHHHHHHCCHHEEEEHHCCCCCCEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHC
FNYNEPETLYTCGTLTINPDEHKVTENDKLIDLSPREYKLLLYLLENRNKVMSRTQILTA
CCCCCCCEEEEEEEEEECCCCCEECCCCCEEECCCCHHEEEEEEHHCCHHHHHHHHHHHH
VWGINYDNNTNVVDVYISYLRNKIEHNHKFIHTIKGIGYMLKE
HHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVLLIEDDKRISEFIIKGLEENNFTVHLAETGEMARDLVQENTWDIILMDIMLPGIDGI
CEEEEEECCHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCCEEEEEECCCCCCHH
QLVKLMRFKKIHTPILILSALSNTDDKVTALDSGADDYLVKPFHFKELISRVNALTRRTK
HHHHHHHHHHHCCHHEEEEHHCCCCCCEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHC
FNYNEPETLYTCGTLTINPDEHKVTENDKLIDLSPREYKLLLYLLENRNKVMSRTQILTA
CCCCCCCEEEEEEEEEECCCCCEECCCCCEEECCCCHHEEEEEEHHCCHHHHHHHHHHHH
VWGINYDNNTNVVDVYISYLRNKIEHNHKFIHTIKGIGYMLKE
HHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]