| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302024
Identifier: 146302024
GI number: 146302024
Start: 5181247
End: 5181984
Strand: Direct
Name: 146302024
Synonym: Fjoh_4288
Alternate gene names: NA
Gene position: 5181247-5181984 (Clockwise)
Preceding gene: 146302023
Following gene: 146302027
Centisome position: 84.98
GC content: 26.42
Gene sequence:
>738_bases ATGATTATCAAAAACTTAACACAGATATCTCACCTAATATTAATTAAAACAATGGAAATATATTTAGTCGGAGTTATTAT TACTTTATTATCTTTGTACATAAAAACTTACATTCAAGAAAAAGCAAAAATTGATGCTTTAAAATCTGAGAATAAAAGAT TAATTGATCAAACAGAAAAAATAAAATCAAAATACAGCAAAAAATTAGAAGAACTTAAAAAAGAACATCAATTAGATATC GCGAAAAGAAAATATAAATATGAGAGCAAGAGAGATCAATATGTTTCATTTTTTCAACTTTTAGATCAATTTACTAAAGA TAATTCCATTAAAGTCAATGAAAGATTAACACCTTTAATAGGAGAATTTTCGACAAATTATTTAAATGCGCCAGATCAAG AAGCTCAGACAAAAGCAATTACAACATTTAGCACAGAAATTCAAAAATTTACTTTTGAAGGCAGTCAAGACCTTATGAAA ATTAAACAACAAACCAATACAATTAGGATGACTGCAAGTGATAAAGTTATTAAGAAATTAGATATGTTAAATCTTGCTTT TGAGAAGACAATAGAACAAAGTAATAAGACTATGAATGATTTACCAACACTTATGCTTCATAATGATCAACAAAAAATGC AAGAAAATCAGATTAAGCTAGAAGAATGCGGGGCGCTTGTTAAAAAATATAACGATGAGCTAATTGCTTTGATGAGGCAG GAATTAGATGAAATATAA
Upstream 100 bases:
>100_bases AAAATTTTGTTCATTATACAATGAATGAATTAAATACGAAAATTGGTTAGAAATATCTTATTAATTTAAAATATTTCAAT TAAAAACCTCACCTATCAAA
Downstream 100 bases:
>100_bases TTACTATTTTTTACTAATTCATAAAAATAATTACAAAAAACCTCGATCATAAAATCGAGGTTTTTACTTTAGTAAATCCC TACTCCTCACTTAAATAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIIKNLTQISHLILIKTMEIYLVGVIITLLSLYIKTYIQEKAKIDALKSENKRLIDQTEKIKSKYSKKLEELKKEHQLDI AKRKYKYESKRDQYVSFFQLLDQFTKDNSIKVNERLTPLIGEFSTNYLNAPDQEAQTKAITTFSTEIQKFTFEGSQDLMK IKQQTNTIRMTASDKVIKKLDMLNLAFEKTIEQSNKTMNDLPTLMLHNDQQKMQENQIKLEECGALVKKYNDELIALMRQ ELDEI
Sequences:
>Translated_245_residues MIIKNLTQISHLILIKTMEIYLVGVIITLLSLYIKTYIQEKAKIDALKSENKRLIDQTEKIKSKYSKKLEELKKEHQLDI AKRKYKYESKRDQYVSFFQLLDQFTKDNSIKVNERLTPLIGEFSTNYLNAPDQEAQTKAITTFSTEIQKFTFEGSQDLMK IKQQTNTIRMTASDKVIKKLDMLNLAFEKTIEQSNKTMNDLPTLMLHNDQQKMQENQIKLEECGALVKKYNDELIALMRQ ELDEI >Mature_245_residues MIIKNLTQISHLILIKTMEIYLVGVIITLLSLYIKTYIQEKAKIDALKSENKRLIDQTEKIKSKYSKKLEELKKEHQLDI AKRKYKYESKRDQYVSFFQLLDQFTKDNSIKVNERLTPLIGEFSTNYLNAPDQEAQTKAITTFSTEIQKFTFEGSQDLMK IKQQTNTIRMTASDKVIKKLDMLNLAFEKTIEQSNKTMNDLPTLMLHNDQQKMQENQIKLEECGALVKKYNDELIALMRQ ELDEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28756; Mature: 28756
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKNLTQISHLILIKTMEIYLVGVIITLLSLYIKTYIQEKAKIDALKSENKRLIDQTEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IKSKYSKKLEELKKEHQLDIAKRKYKYESKRDQYVSFFQLLDQFTKDNSIKVNERLTPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHH GEFSTNYLNAPDQEAQTKAITTFSTEIQKFTFEGSQDLMKIKQQTNTIRMTASDKVIKKL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECHHHHHHHH DMLNLAFEKTIEQSNKTMNDLPTLMLHNDQQKMQENQIKLEECGALVKKYNDELIALMRQ HHHHHHHHHHHHHHCCHHHHCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ELDEI HHHCC >Mature Secondary Structure MIIKNLTQISHLILIKTMEIYLVGVIITLLSLYIKTYIQEKAKIDALKSENKRLIDQTEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IKSKYSKKLEELKKEHQLDIAKRKYKYESKRDQYVSFFQLLDQFTKDNSIKVNERLTPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHH GEFSTNYLNAPDQEAQTKAITTFSTEIQKFTFEGSQDLMKIKQQTNTIRMTASDKVIKKL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECHHHHHHHH DMLNLAFEKTIEQSNKTMNDLPTLMLHNDQQKMQENQIKLEECGALVKKYNDELIALMRQ HHHHHHHHHHHHHHCCHHHHCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ELDEI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA