Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302023

Identifier: 146302023

GI number: 146302023

Start: 5180378

End: 5181196

Strand: Direct

Name: 146302023

Synonym: Fjoh_4287

Alternate gene names: NA

Gene position: 5180378-5181196 (Clockwise)

Preceding gene: 146302022

Following gene: 146302024

Centisome position: 84.97

GC content: 29.79

Gene sequence:

>819_bases
ATGAAAAACGAACTAAAAATTACCGACACTTCAATTGAAGAAAAAATTAAAAGAGAATTAAAACCAAAACCAGGAAGTGA
ACGAGATAAAATTTTTTCAAAATTTTTCAGCGCAGCTTTAGGTGGTATTCCATGGGTTGGTGGATTTTTAAGCATCTTGA
CAGATTTACATTTTGATGATCAATCCAAAAACAATATTCTTTATGAAAAATGGCTTGAAGAGCATCAAAATAAAATGAGA
TTACTTGGTGAAACGTTGTTTGAAGTTGTAAAAAAACTAAACGAATTTTCAGAAGATATTAACGAAAGACTTGAAAGTGA
AGAATATTTACAAATTGTACGTAAATCATTTAGAACTTGGGACAATGCCGATACCTTTGAAAAACGAGAATTAATAAGAA
AGTTAATTACAAATGCAGGAGGGCAAAAAATTGTTGACGATGACATAATTAGACTTTTCTTAGATTGGTTAAATCTTTAT
CATGAAATTCATTTTTCAGTTATAAAGGTAATTTACCAGAACCAAAGTGCTACCAGAGGTGAAATATGGCAAGAATTAAA
TGGAACTTATGTCAGAGAAGATTCCATGGAAGCAGATTTATTTAAAATGTTAATTAGAGATTTAAGTACAGGAGGAGTAA
TTCGTCAATATAGACCAACTGATTATTACGGAAATTTTGTAAAGCAAAAGAGAACAAAGGCTCCATCATCAGGAACTTTA
AAATCTGCTTTTGATGATCAAGAACAATATGTTCTTACTAGTCTAGGGCAAAATTTTGTTCATTATACAATGAATGAATT
AAATACGAAAATTGGTTAG

Upstream 100 bases:

>100_bases
TTTACTTGTAGGTCAAATAAATATTTTTATGTTAATAAATTTAAATTATTTTAATTGAAGTTATATGTAAATTTAAAGTC
AAATTTTCAAGTATTAAGAA

Downstream 100 bases:

>100_bases
AAATATCTTATTAATTTAAAATATTTCAATTAAAAACCTCACCTATCAAAATGATTATCAAAAACTTAACACAGATATCT
CACCTAATATTAATTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDDQSKNNILYEKWLEEHQNKMR
LLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTWDNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLY
HEIHFSVIKVIYQNQSATRGEIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL
KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG

Sequences:

>Translated_272_residues
MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDDQSKNNILYEKWLEEHQNKMR
LLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTWDNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLY
HEIHFSVIKVIYQNQSATRGEIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL
KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG
>Mature_272_residues
MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDDQSKNNILYEKWLEEHQNKMR
LLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTWDNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLY
HEIHFSVIKVIYQNQSATRGEIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL
KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31898; Mature: 31898

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDD
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QSKNNILYEKWLEEHQNKMRLLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
DNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLYHEIHFSVIKVIYQNQSATRG
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL
HHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCH
KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDD
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QSKNNILYEKWLEEHQNKMRLLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
DNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLYHEIHFSVIKVIYQNQSATRG
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL
HHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCH
KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA