| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302023
Identifier: 146302023
GI number: 146302023
Start: 5180378
End: 5181196
Strand: Direct
Name: 146302023
Synonym: Fjoh_4287
Alternate gene names: NA
Gene position: 5180378-5181196 (Clockwise)
Preceding gene: 146302022
Following gene: 146302024
Centisome position: 84.97
GC content: 29.79
Gene sequence:
>819_bases ATGAAAAACGAACTAAAAATTACCGACACTTCAATTGAAGAAAAAATTAAAAGAGAATTAAAACCAAAACCAGGAAGTGA ACGAGATAAAATTTTTTCAAAATTTTTCAGCGCAGCTTTAGGTGGTATTCCATGGGTTGGTGGATTTTTAAGCATCTTGA CAGATTTACATTTTGATGATCAATCCAAAAACAATATTCTTTATGAAAAATGGCTTGAAGAGCATCAAAATAAAATGAGA TTACTTGGTGAAACGTTGTTTGAAGTTGTAAAAAAACTAAACGAATTTTCAGAAGATATTAACGAAAGACTTGAAAGTGA AGAATATTTACAAATTGTACGTAAATCATTTAGAACTTGGGACAATGCCGATACCTTTGAAAAACGAGAATTAATAAGAA AGTTAATTACAAATGCAGGAGGGCAAAAAATTGTTGACGATGACATAATTAGACTTTTCTTAGATTGGTTAAATCTTTAT CATGAAATTCATTTTTCAGTTATAAAGGTAATTTACCAGAACCAAAGTGCTACCAGAGGTGAAATATGGCAAGAATTAAA TGGAACTTATGTCAGAGAAGATTCCATGGAAGCAGATTTATTTAAAATGTTAATTAGAGATTTAAGTACAGGAGGAGTAA TTCGTCAATATAGACCAACTGATTATTACGGAAATTTTGTAAAGCAAAAGAGAACAAAGGCTCCATCATCAGGAACTTTA AAATCTGCTTTTGATGATCAAGAACAATATGTTCTTACTAGTCTAGGGCAAAATTTTGTTCATTATACAATGAATGAATT AAATACGAAAATTGGTTAG
Upstream 100 bases:
>100_bases TTTACTTGTAGGTCAAATAAATATTTTTATGTTAATAAATTTAAATTATTTTAATTGAAGTTATATGTAAATTTAAAGTC AAATTTTCAAGTATTAAGAA
Downstream 100 bases:
>100_bases AAATATCTTATTAATTTAAAATATTTCAATTAAAAACCTCACCTATCAAAATGATTATCAAAAACTTAACACAGATATCT CACCTAATATTAATTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDDQSKNNILYEKWLEEHQNKMR LLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTWDNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLY HEIHFSVIKVIYQNQSATRGEIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG
Sequences:
>Translated_272_residues MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDDQSKNNILYEKWLEEHQNKMR LLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTWDNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLY HEIHFSVIKVIYQNQSATRGEIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG >Mature_272_residues MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDDQSKNNILYEKWLEEHQNKMR LLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTWDNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLY HEIHFSVIKVIYQNQSATRGEIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31898; Mature: 31898
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDD CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC QSKNNILYEKWLEEHQNKMRLLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC DNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLYHEIHFSVIKVIYQNQSATRG CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL HHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCH KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNELKITDTSIEEKIKRELKPKPGSERDKIFSKFFSAALGGIPWVGGFLSILTDLHFDD CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC QSKNNILYEKWLEEHQNKMRLLGETLFEVVKKLNEFSEDINERLESEEYLQIVRKSFRTW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC DNADTFEKRELIRKLITNAGGQKIVDDDIIRLFLDWLNLYHEIHFSVIKVIYQNQSATRG CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EIWQELNGTYVREDSMEADLFKMLIRDLSTGGVIRQYRPTDYYGNFVKQKRTKAPSSGTL HHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCH KSAFDDQEQYVLTSLGQNFVHYTMNELNTKIG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA