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The map label for this gene is 146302012

Identifier: 146302012

GI number: 146302012

Start: 5166704

End: 5167261

Strand: Direct

Name: 146302012

Synonym: Fjoh_4276

Alternate gene names: NA

Gene position: 5166704-5167261 (Clockwise)

Preceding gene: 146302011

Following gene: 146302013

Centisome position: 84.74

GC content: 29.93

Gene sequence:

>558_bases
ATGGAGAAAACATATTCGGTTGTATTTTATTCTAAAACATTGGTTGAGCCTGTTAAAAAATTGAAAGACTTTTTAAGAAG
CAAAATTAAATGGTACAACAGCTGTAATTCTGAAGCACATATTACGATTTGTGAATTTACAATTGATGAATCAAAGCTTG
ATTCCATCAAACAAAAGCTTGCCAAAATTTCAGATACTTTTACACCTTTTCAAGTAAATTTAGATCATTTTGATTCCTTT
CCAAAAGCCGGTGCTTTTTTTATTGGTGTAAATGACGATTCAAAAAATAATCTTGTACCCATCATGAAAAAGACTCACGA
AACTTTAAAACCTTTAAAGCATAAAAGTGATAATCCACATCTGTCAATTGGACGAAAATTAACTCCTGAAAACCTTAAAA
TTGCTTCTGAACTTTTTACCACAATTGACCTTCAATTTGAGTGCAATGAAATTGTTTTAAGAGAATTTGATCCCCTAGTA
AAACAGTTTTTTGTAATTGATTCTTTTAAATTTGGAAGTAATCCAGAACCTGAGTTTGTTCAGGGAAGACTTTTTTAA

Upstream 100 bases:

>100_bases
GTAGGGATGGATTTTAATCCGTCCATAAATCAAGAATATTTTTATGCGGCGCTGAAAGCACAATTTAAATTTTAAATTTG
TGTAATTCAAAATCCTAAAA

Downstream 100 bases:

>100_bases
CCGCAAAGAGCGCAAAGATTTACGCAAGGTTAGCAAACCATATTGAACATAGCCAATAACTTTAACCATTGGAGTACCAA
GTCTATAATCTTTTGAATAA

Product: 2',5' RNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MEKTYSVVFYSKTLVEPVKKLKDFLRSKIKWYNSCNSEAHITICEFTIDESKLDSIKQKLAKISDTFTPFQVNLDHFDSF
PKAGAFFIGVNDDSKNNLVPIMKKTHETLKPLKHKSDNPHLSIGRKLTPENLKIASELFTTIDLQFECNEIVLREFDPLV
KQFFVIDSFKFGSNPEPEFVQGRLF

Sequences:

>Translated_185_residues
MEKTYSVVFYSKTLVEPVKKLKDFLRSKIKWYNSCNSEAHITICEFTIDESKLDSIKQKLAKISDTFTPFQVNLDHFDSF
PKAGAFFIGVNDDSKNNLVPIMKKTHETLKPLKHKSDNPHLSIGRKLTPENLKIASELFTTIDLQFECNEIVLREFDPLV
KQFFVIDSFKFGSNPEPEFVQGRLF
>Mature_185_residues
MEKTYSVVFYSKTLVEPVKKLKDFLRSKIKWYNSCNSEAHITICEFTIDESKLDSIKQKLAKISDTFTPFQVNLDHFDSF
PKAGAFFIGVNDDSKNNLVPIMKKTHETLKPLKHKSDNPHLSIGRKLTPENLKIASELFTTIDLQFECNEIVLREFDPLV
KQFFVIDSFKFGSNPEPEFVQGRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21402; Mature: 21402

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTYSVVFYSKTLVEPVKKLKDFLRSKIKWYNSCNSEAHITICEFTIDESKLDSIKQKL
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHH
AKISDTFTPFQVNLDHFDSFPKAGAFFIGVNDDSKNNLVPIMKKTHETLKPLKHKSDNPH
HHHHCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCCC
LSIGRKLTPENLKIASELFTTIDLQFECNEIVLREFDPLVKQFFVIDSFKFGSNPEPEFV
EEECCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QGRLF
CCCCC
>Mature Secondary Structure
MEKTYSVVFYSKTLVEPVKKLKDFLRSKIKWYNSCNSEAHITICEFTIDESKLDSIKQKL
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHH
AKISDTFTPFQVNLDHFDSFPKAGAFFIGVNDDSKNNLVPIMKKTHETLKPLKHKSDNPH
HHHHCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCCC
LSIGRKLTPENLKIASELFTTIDLQFECNEIVLREFDPLVKQFFVIDSFKFGSNPEPEFV
EEECCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QGRLF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA