Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302013

Identifier: 146302013

GI number: 146302013

Start: 5167442

End: 5168359

Strand: Direct

Name: 146302013

Synonym: Fjoh_4277

Alternate gene names: NA

Gene position: 5167442-5168359 (Clockwise)

Preceding gene: 146302012

Following gene: 146302014

Centisome position: 84.76

GC content: 26.14

Gene sequence:

>918_bases
ATGGAAAATTTAATTATTCCCTTATTAGGAAAATCTCTTAAATCAAAAGAAATACTTTCATTTATACGTCAATATAACTT
ACCCGCTAATCCAAAGATAGAATTGGATTATTTAGGTGATATTTTTGAAAGTAAGTCAGCAAATGAAAAATCTGGAATTT
ATATGACTTTTGAAGGCTATAAAAGATTTAAATATGGATATGGAGAACCTGCTGAAATTATTAAAAATCCTGACAAAAGC
CTTTTCTTGACCGAGATAAGTCTTGAAAACGACTATACTAACAATAAAATACCATCTATTATTAAATTCCCTTTTGGCTT
AATACAAGGTGATGATTATAAAACAGTGGTAAATAAGATTGGTAAAAAACCAAATAAAAAAGGCGTTTCTTCTTATGGTA
AATATTATTGGACAGAATTTGATGACTATCGAATTTTAACGGCCTTTGATAAAGATTTGGAAATACTCATTTGGATTAGA
ATTAAAAAATTAACACTACAAGAAAAAGAAAAAATAAGGCTTAAAAAATTTCTAAATCAGCAAAGTAAAAATATTAATCC
TGATAATGCAGATTTAATTTTAAGTTTCTTGTACAAATTACCAACTATTGAATGGGAAAAGAGAAGAAAAAATGGAGATA
AAGAATTTACCAAAGAGAAAATCGGTCTAATTGAAACTTTATTAAAAGATTATATAAATACATTAATAAAACTTACAAAA
GAAAAAAAGGCTTCCTCTATCTTTAATTCAATAAAAAAACTAGTCCTTGCAATTAATAAAATTAATCCTAAATATGATTA
TTTCATTGAAACAATGGAAAGAGAAGAACTTTGCCAATTTATCAATGATATTATAAGGAACACTGGACTTGAATTTGAAG
CCAATTTTGATCTAACAGAAGAATGGCGTGAATGGTAA

Upstream 100 bases:

>100_bases
GTCTATAATCTTTTGAATAATCATTTTTCACAATTCAATATTTAAAAAAGAAGGTTTTTACTTACTTTTTAATATTTTTG
CTGATTAAAATTAATTAAGC

Downstream 100 bases:

>100_bases
ATAGCAAACATTCTAAGCCAATCCAAAAAACTTTGCGAACCTTGCGTAAAATCTTTGCGCTATTCGCAGTTAAACTCACG
AAGCATATTTTTCCGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGYKRFKYGYGEPAEIIKNPDKS
LFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKIGKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIR
IKKLTLQEKEKIRLKKFLNQQSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK
EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTEEWREW

Sequences:

>Translated_305_residues
MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGYKRFKYGYGEPAEIIKNPDKS
LFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKIGKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIR
IKKLTLQEKEKIRLKKFLNQQSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK
EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTEEWREW
>Mature_305_residues
MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGYKRFKYGYGEPAEIIKNPDKS
LFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKIGKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIR
IKKLTLQEKEKIRLKKFLNQQSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK
EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTEEWREW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36034; Mature: 36034

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGY
CCCCEEHHHCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCC
KRFKYGYGEPAEIIKNPDKSLFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKI
HHHCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHCCCCCHHHHHHHH
GKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIRIKKLTLQEKEKIRLKKFLNQ
CCCCCCCCHHHHCCEEECCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH
QSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK
HHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCHH
EWREW
HHHCC
>Mature Secondary Structure
MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGY
CCCCEEHHHCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCC
KRFKYGYGEPAEIIKNPDKSLFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKI
HHHCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHCCCCCHHHHHHHH
GKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIRIKKLTLQEKEKIRLKKFLNQ
CCCCCCCCHHHHCCEEECCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH
QSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK
HHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCHH
EWREW
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA