| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302013
Identifier: 146302013
GI number: 146302013
Start: 5167442
End: 5168359
Strand: Direct
Name: 146302013
Synonym: Fjoh_4277
Alternate gene names: NA
Gene position: 5167442-5168359 (Clockwise)
Preceding gene: 146302012
Following gene: 146302014
Centisome position: 84.76
GC content: 26.14
Gene sequence:
>918_bases ATGGAAAATTTAATTATTCCCTTATTAGGAAAATCTCTTAAATCAAAAGAAATACTTTCATTTATACGTCAATATAACTT ACCCGCTAATCCAAAGATAGAATTGGATTATTTAGGTGATATTTTTGAAAGTAAGTCAGCAAATGAAAAATCTGGAATTT ATATGACTTTTGAAGGCTATAAAAGATTTAAATATGGATATGGAGAACCTGCTGAAATTATTAAAAATCCTGACAAAAGC CTTTTCTTGACCGAGATAAGTCTTGAAAACGACTATACTAACAATAAAATACCATCTATTATTAAATTCCCTTTTGGCTT AATACAAGGTGATGATTATAAAACAGTGGTAAATAAGATTGGTAAAAAACCAAATAAAAAAGGCGTTTCTTCTTATGGTA AATATTATTGGACAGAATTTGATGACTATCGAATTTTAACGGCCTTTGATAAAGATTTGGAAATACTCATTTGGATTAGA ATTAAAAAATTAACACTACAAGAAAAAGAAAAAATAAGGCTTAAAAAATTTCTAAATCAGCAAAGTAAAAATATTAATCC TGATAATGCAGATTTAATTTTAAGTTTCTTGTACAAATTACCAACTATTGAATGGGAAAAGAGAAGAAAAAATGGAGATA AAGAATTTACCAAAGAGAAAATCGGTCTAATTGAAACTTTATTAAAAGATTATATAAATACATTAATAAAACTTACAAAA GAAAAAAAGGCTTCCTCTATCTTTAATTCAATAAAAAAACTAGTCCTTGCAATTAATAAAATTAATCCTAAATATGATTA TTTCATTGAAACAATGGAAAGAGAAGAACTTTGCCAATTTATCAATGATATTATAAGGAACACTGGACTTGAATTTGAAG CCAATTTTGATCTAACAGAAGAATGGCGTGAATGGTAA
Upstream 100 bases:
>100_bases GTCTATAATCTTTTGAATAATCATTTTTCACAATTCAATATTTAAAAAAGAAGGTTTTTACTTACTTTTTAATATTTTTG CTGATTAAAATTAATTAAGC
Downstream 100 bases:
>100_bases ATAGCAAACATTCTAAGCCAATCCAAAAAACTTTGCGAACCTTGCGTAAAATCTTTGCGCTATTCGCAGTTAAACTCACG AAGCATATTTTTCCGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGYKRFKYGYGEPAEIIKNPDKS LFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKIGKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIR IKKLTLQEKEKIRLKKFLNQQSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTEEWREW
Sequences:
>Translated_305_residues MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGYKRFKYGYGEPAEIIKNPDKS LFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKIGKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIR IKKLTLQEKEKIRLKKFLNQQSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTEEWREW >Mature_305_residues MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGYKRFKYGYGEPAEIIKNPDKS LFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKIGKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIR IKKLTLQEKEKIRLKKFLNQQSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTEEWREW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36034; Mature: 36034
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGY CCCCEEHHHCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCC KRFKYGYGEPAEIIKNPDKSLFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKI HHHCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHCCCCCHHHHHHHH GKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIRIKKLTLQEKEKIRLKKFLNQ CCCCCCCCHHHHCCEEECCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH QSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK HHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCHH EWREW HHHCC >Mature Secondary Structure MENLIIPLLGKSLKSKEILSFIRQYNLPANPKIELDYLGDIFESKSANEKSGIYMTFEGY CCCCEEHHHCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCC KRFKYGYGEPAEIIKNPDKSLFLTEISLENDYTNNKIPSIIKFPFGLIQGDDYKTVVNKI HHHCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHCCCCCHHHHHHHH GKKPNKKGVSSYGKYYWTEFDDYRILTAFDKDLEILIWIRIKKLTLQEKEKIRLKKFLNQ CCCCCCCCHHHHCCEEECCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH QSKNINPDNADLILSFLYKLPTIEWEKRRKNGDKEFTKEKIGLIETLLKDYINTLIKLTK HHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EKKASSIFNSIKKLVLAINKINPKYDYFIETMEREELCQFINDIIRNTGLEFEANFDLTE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCHH EWREW HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA