Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302011

Identifier: 146302011

GI number: 146302011

Start: 5165001

End: 5166368

Strand: Direct

Name: 146302011

Synonym: Fjoh_4275

Alternate gene names: NA

Gene position: 5165001-5166368 (Clockwise)

Preceding gene: 146302010

Following gene: 146302012

Centisome position: 84.72

GC content: 34.65

Gene sequence:

>1368_bases
ATGAAAAACACATTCTTCTTATTGTTGCTTTTGGGAATCTTTTTTTATGCAAACGCACAACAAAAACCAGTTTTCCAAAA
GCTGCGATATGAGGATGATTTCACTTATCTAAAAGCTGATTCGACGAAAACTCCATACGAGAAAATCAAATATATTCCGT
TAGGAAAAAACGATAAATATTATGCTTCAATTGGCGGAGAAGCAAGACTGCAGTATACTTACACCGTTAACAATAAATGG
GGAGACGAATCTGACGATGATGGGTATTTACTTTCTCGTTATCTGCTTCATGCAAATGTTCAACTGGGCGTTTTTAGAAC
ATTTTTTCAATTGCAAAGCAGTTTAGCAAACGGCAAAACAGATCCAAGTCCGGTTGATGAAAATCAGTTAGATATACATC
AGGCTTTTTTGGATATAGATTTTATCCGAAAAGAAAATGAACAGTTAACCCTGCGTTTCGGAAGACAAGAAATGTCATAC
GGTTCCCAGCGTTTGGTTGCTGTACGAGAAGGTCCAAACAGCCGGCTTGCTTTTGACGGATTGAAACTATTTTATAAAAA
AAACAATTGGCAGTCAGATGCTTTTTTTACACATCCTATTGCCAATAAACAAGGAACTTTTAATGATAGTTTTAATGAAA
ATGCCAAATTTTGGGGAAGTTATACGGTAATTCATAAAGTGCCGTTTATTCAAAACATCGATTTATATTATTTGGGTTTA
TGGAAAAGCCGAGCTGTTTTTGATGATGCCGTTGGTGCAGAAAACAGACAATCGATTGGAACACGAATCTGGAAAAACAA
AGGAAACTGGAAATACGATTTTGAAGGTGTTTACCAGTTCGGGAACATCAATCAAAGGACAATTTCAGCCTGGACCATTT
CTTCTTTTGCTTGTTATACTTTCGAAAACATAAAATACACTCCGGAAATTGGATTAAAAACAGAAATCATTTCAGGAGAT
AAAAATTCTGGCGATGGCTATTTACAAACTTTCAATCCGTTATATCCAAGAGGCGCTTATTTTGGATTAGTTGCCCTTAT
AGGTCCATCAAATTTAGTTGACGTTCATCCTTCAATTAATTTTAGTTTATCTGAAAAATGGGGACTCGGAATTGATTATG
ATATTTTCTGGAGACAAACCATAAGTGATGGTATATACGCACCAAACATGCAGCTTTTATATTCAGGAAAAGATACAACG
GAACGTTTTATAGGTTCACAGTTAATATCAAATGTAAACTACGATATGAATAATCATTTAGGTTTTACATTAGAAACTGG
CTGGTTTAATGCAGGTTCATTTTTAAAAGAAGTCGGTTCAGGAAAAGATTATTTTTATGCAGCATTGACGGCACAATTTA
AATTTTAA

Upstream 100 bases:

>100_bases
TGATAATGACTTTAGAACTTTTGTAAACGAAAAACCAAAAGCAATTCCAGACTGGAGTCCGGTAAATTACTTTGGAGGTT
ATCAAAAAAATTAATTCAAA

Downstream 100 bases:

>100_bases
TAAAGAACCGTAGGTTCGGTACATCTTGTAGGGATGGATTTTAATCCGTCCAATTAGGAAAAGATTATTTTTATGCAGCA
TTGACGGCACAATTTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MKNTFFLLLLLGIFFYANAQQKPVFQKLRYEDDFTYLKADSTKTPYEKIKYIPLGKNDKYYASIGGEARLQYTYTVNNKW
GDESDDDGYLLSRYLLHANVQLGVFRTFFQLQSSLANGKTDPSPVDENQLDIHQAFLDIDFIRKENEQLTLRFGRQEMSY
GSQRLVAVREGPNSRLAFDGLKLFYKKNNWQSDAFFTHPIANKQGTFNDSFNENAKFWGSYTVIHKVPFIQNIDLYYLGL
WKSRAVFDDAVGAENRQSIGTRIWKNKGNWKYDFEGVYQFGNINQRTISAWTISSFACYTFENIKYTPEIGLKTEIISGD
KNSGDGYLQTFNPLYPRGAYFGLVALIGPSNLVDVHPSINFSLSEKWGLGIDYDIFWRQTISDGIYAPNMQLLYSGKDTT
ERFIGSQLISNVNYDMNNHLGFTLETGWFNAGSFLKEVGSGKDYFYAALTAQFKF

Sequences:

>Translated_455_residues
MKNTFFLLLLLGIFFYANAQQKPVFQKLRYEDDFTYLKADSTKTPYEKIKYIPLGKNDKYYASIGGEARLQYTYTVNNKW
GDESDDDGYLLSRYLLHANVQLGVFRTFFQLQSSLANGKTDPSPVDENQLDIHQAFLDIDFIRKENEQLTLRFGRQEMSY
GSQRLVAVREGPNSRLAFDGLKLFYKKNNWQSDAFFTHPIANKQGTFNDSFNENAKFWGSYTVIHKVPFIQNIDLYYLGL
WKSRAVFDDAVGAENRQSIGTRIWKNKGNWKYDFEGVYQFGNINQRTISAWTISSFACYTFENIKYTPEIGLKTEIISGD
KNSGDGYLQTFNPLYPRGAYFGLVALIGPSNLVDVHPSINFSLSEKWGLGIDYDIFWRQTISDGIYAPNMQLLYSGKDTT
ERFIGSQLISNVNYDMNNHLGFTLETGWFNAGSFLKEVGSGKDYFYAALTAQFKF
>Mature_455_residues
MKNTFFLLLLLGIFFYANAQQKPVFQKLRYEDDFTYLKADSTKTPYEKIKYIPLGKNDKYYASIGGEARLQYTYTVNNKW
GDESDDDGYLLSRYLLHANVQLGVFRTFFQLQSSLANGKTDPSPVDENQLDIHQAFLDIDFIRKENEQLTLRFGRQEMSY
GSQRLVAVREGPNSRLAFDGLKLFYKKNNWQSDAFFTHPIANKQGTFNDSFNENAKFWGSYTVIHKVPFIQNIDLYYLGL
WKSRAVFDDAVGAENRQSIGTRIWKNKGNWKYDFEGVYQFGNINQRTISAWTISSFACYTFENIKYTPEIGLKTEIISGD
KNSGDGYLQTFNPLYPRGAYFGLVALIGPSNLVDVHPSINFSLSEKWGLGIDYDIFWRQTISDGIYAPNMQLLYSGKDTT
ERFIGSQLISNVNYDMNNHLGFTLETGWFNAGSFLKEVGSGKDYFYAALTAQFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52359; Mature: 52359

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTFFLLLLLGIFFYANAQQKPVFQKLRYEDDFTYLKADSTKTPYEKIKYIPLGKNDKY
CCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCCCHHHEEEEECCCCCCE
YASIGGEARLQYTYTVNNKWGDESDDDGYLLSRYLLHANVQLGVFRTFFQLQSSLANGKT
EEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
DPSPVDENQLDIHQAFLDIDFIRKENEQLTLRFGRQEMSYGSQRLVAVREGPNSRLAFDG
CCCCCCCCHHHHHHHHHHHHHEECCCCEEEEEECCHHHCCCCEEEEEEECCCCCCEEECC
LKLFYKKNNWQSDAFFTHPIANKQGTFNDSFNENAKFWGSYTVIHKVPFIQNIDLYYLGL
EEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEECCCEEEEEE
WKSRAVFDDAVGAENRQSIGTRIWKNKGNWKYDFEGVYQFGNINQRTISAWTISSFACYT
ECCCCHHHHHCCCCCHHHHHHHHCCCCCCEEEEECEEEEECCCCCEEEEEEEECCEEEEE
FENIKYTPEIGLKTEIISGDKNSGDGYLQTFNPLYPRGAYFGLVALIGPSNLVDVHPSIN
EECEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHEEEEEEECCCCEEEECCCCC
FSLSEKWGLGIDYDIFWRQTISDGIYAPNMQLLYSGKDTTERFIGSQLISNVNYDMNNHL
EEECCCCCCCCCEEEEEHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCE
GFTLETGWFNAGSFLKEVGSGKDYFYAALTAQFKF
EEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKNTFFLLLLLGIFFYANAQQKPVFQKLRYEDDFTYLKADSTKTPYEKIKYIPLGKNDKY
CCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCCCHHHEEEEECCCCCCE
YASIGGEARLQYTYTVNNKWGDESDDDGYLLSRYLLHANVQLGVFRTFFQLQSSLANGKT
EEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
DPSPVDENQLDIHQAFLDIDFIRKENEQLTLRFGRQEMSYGSQRLVAVREGPNSRLAFDG
CCCCCCCCHHHHHHHHHHHHHEECCCCEEEEEECCHHHCCCCEEEEEEECCCCCCEEECC
LKLFYKKNNWQSDAFFTHPIANKQGTFNDSFNENAKFWGSYTVIHKVPFIQNIDLYYLGL
EEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEECCCEEEEEE
WKSRAVFDDAVGAENRQSIGTRIWKNKGNWKYDFEGVYQFGNINQRTISAWTISSFACYT
ECCCCHHHHHCCCCCHHHHHHHHCCCCCCEEEEECEEEEECCCCCEEEEEEEECCEEEEE
FENIKYTPEIGLKTEIISGDKNSGDGYLQTFNPLYPRGAYFGLVALIGPSNLVDVHPSIN
EECEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHEEEEEEECCCCEEEECCCCC
FSLSEKWGLGIDYDIFWRQTISDGIYAPNMQLLYSGKDTTERFIGSQLISNVNYDMNNHL
EEECCCCCCCCCEEEEEHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCE
GFTLETGWFNAGSFLKEVGSGKDYFYAALTAQFKF
EEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA