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The map label for this gene is chiB [H]

Identifier: 146301911

GI number: 146301911

Start: 5009256

End: 5010881

Strand: Reverse

Name: chiB [H]

Synonym: Fjoh_4175

Alternate gene names: 146301911

Gene position: 5010881-5009256 (Counterclockwise)

Preceding gene: 146301912

Following gene: 146301910

Centisome position: 82.19

GC content: 39.11

Gene sequence:

>1626_bases
ATGAAAAACAATTACAGAAGAATGCTGCAGAAATGCATGATTATTTTAGTGTTGGGTCTTTTTAATTTAGCGTCAGCCCA
AAAAAAAGTAATAGCTTATATCCCGAACTGGATAGATTTAAATGCTTTTTCAAGTACAATTCAGTACAGTAAATTAACGC
ACATTAATATTGCGTTCGAAAATCCCGATGCAAATGGTTATTTGAGTTTTAATTCAGGAAGCAATGCGATTATTAATGCG
GCTCATGCCCAGAATATTAAAGTTTTTGTATCGCTTGGAGGAGGTTCTGTTTCTGAAGGCGGTGCAATTCGCGACAATTA
TTTTAATTTGATTACGCCGGCAAACAGAACCGCTTTTATTCAAAAAATCTACGATTACGTAGTAGCGCATAATTTTGACG
GTGTCGATGTAGACTTAGAAGGTCCGGCAATTAATGGCGACTACGGAGGATTTGTAATTGCACTTGCTAATAAACTGCAT
GCTAATGGTAAATTAATCTCAGCAGCGCTTTCAGAAGGATATGGTGGTGCAAATGTACCTTCATCTACTTTTGCAGCTTA
TGACTGGATCAATATCATGGCGTATGATGCAACAGGACCTTGGGCACCTGGAAATCCGGGACAGCATTCTCCATACAGCA
TGGCCGTAAACCAATTCAATTATTGGACTGGCAGAGGATTACCGGCAAGTAAAGCCATTATTGGACTTCCTTTTTACGGA
TATGGTTTTGGAGCTTCGGCCAATCAGGGAATTTCTTATGCCAATATCGTGGCGCAGTATCCGGGAGCTGAAAATCTGGA
TCAGGTTGGAAATACAATTTATTATAACGGAATCCCAACAATTAAACAAAAAACAACTTTTGCTGTTCAAAACGCAGGCG
GTGTTATGATCTGGGAATTATCTCAGGATGCAACGGGTGCAAAATCATTACTTACAGCTGTTGATCAAGTTGTAAAAGGA
AGCAACCCTCCAACAGGAACAGGAACTTTAATTCAGGCTGAAAATTACAACACCATGAGCGGTGTTCAAACAGAAGCAAC
AACTGATACGGGAGGCGGATTAAACGTTGGATATTGTGATACTGGCGACTGGATGGCATATTACAACATTAATTTTCCAA
CTTCAGGAAATTACATAATTGAATACCGAGTGGCAAGCGCCGTTACCGGCGGCAGATTATCATCTGATTTAAATGCAGGG
ACGATTCAGCTTGGTGCTGTAAATGTACCCAATACTGGAGGATGGCAAAACTGGCAGACGATTACTCAGACTGTAAATGT
AAATGCCGGAACGTATAACTTCGGAATATATGTTCAAAATACAGGTTTTAATATCAACTGGTTTAGAATCACAAAAGCAG
CTTCAGGTTTAGCGGCTAAATCGGCTTCGGCAGATAAAATTGAAAGTTTAACAGTATATCCAAATCCATCAGAAGATACA
CTTTTCTTCTCGGCAGAAGTTTCGGGAGCAAATGTAAGCATTATCAATTCTGAGGGCGGAGCAACAGTTTCTACACAAAA
AGCAAACGACAACAGTATTAATGTTTCAGGTTTAAAAAGCGGTATCTATTTGATTTTAGTTGAAAAAGACGGAATCAAAA
CGGTGAGACGTTTTATTAAAAAGTAA

Upstream 100 bases:

>100_bases
GTCAAATCTAAAATCTAAAGTCTGAAATCTTAAATAAAAATATACAACTCAATAACCGTCCCCTTATTTACGAGTTTATT
AATCTATTAAAACAATTATT

Downstream 100 bases:

>100_bases
CTTTTTAACCGCAAAGTCCGCAAAGAAATAAAACGCAAGGCACGCAAAGGATTAAAAAATTTTGCTCCCGATAGCTATCG
GGATTGCGTAAACTTGGCGC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MKNNYRRMLQKCMIILVLGLFNLASAQKKVIAYIPNWIDLNAFSSTIQYSKLTHINIAFENPDANGYLSFNSGSNAIINA
AHAQNIKVFVSLGGGSVSEGGAIRDNYFNLITPANRTAFIQKIYDYVVAHNFDGVDVDLEGPAINGDYGGFVIALANKLH
ANGKLISAALSEGYGGANVPSSTFAAYDWINIMAYDATGPWAPGNPGQHSPYSMAVNQFNYWTGRGLPASKAIIGLPFYG
YGFGASANQGISYANIVAQYPGAENLDQVGNTIYYNGIPTIKQKTTFAVQNAGGVMIWELSQDATGAKSLLTAVDQVVKG
SNPPTGTGTLIQAENYNTMSGVQTEATTDTGGGLNVGYCDTGDWMAYYNINFPTSGNYIIEYRVASAVTGGRLSSDLNAG
TIQLGAVNVPNTGGWQNWQTITQTVNVNAGTYNFGIYVQNTGFNINWFRITKAASGLAAKSASADKIESLTVYPNPSEDT
LFFSAEVSGANVSIINSEGGATVSTQKANDNSINVSGLKSGIYLILVEKDGIKTVRRFIKK

Sequences:

>Translated_541_residues
MKNNYRRMLQKCMIILVLGLFNLASAQKKVIAYIPNWIDLNAFSSTIQYSKLTHINIAFENPDANGYLSFNSGSNAIINA
AHAQNIKVFVSLGGGSVSEGGAIRDNYFNLITPANRTAFIQKIYDYVVAHNFDGVDVDLEGPAINGDYGGFVIALANKLH
ANGKLISAALSEGYGGANVPSSTFAAYDWINIMAYDATGPWAPGNPGQHSPYSMAVNQFNYWTGRGLPASKAIIGLPFYG
YGFGASANQGISYANIVAQYPGAENLDQVGNTIYYNGIPTIKQKTTFAVQNAGGVMIWELSQDATGAKSLLTAVDQVVKG
SNPPTGTGTLIQAENYNTMSGVQTEATTDTGGGLNVGYCDTGDWMAYYNINFPTSGNYIIEYRVASAVTGGRLSSDLNAG
TIQLGAVNVPNTGGWQNWQTITQTVNVNAGTYNFGIYVQNTGFNINWFRITKAASGLAAKSASADKIESLTVYPNPSEDT
LFFSAEVSGANVSIINSEGGATVSTQKANDNSINVSGLKSGIYLILVEKDGIKTVRRFIKK
>Mature_541_residues
MKNNYRRMLQKCMIILVLGLFNLASAQKKVIAYIPNWIDLNAFSSTIQYSKLTHINIAFENPDANGYLSFNSGSNAIINA
AHAQNIKVFVSLGGGSVSEGGAIRDNYFNLITPANRTAFIQKIYDYVVAHNFDGVDVDLEGPAINGDYGGFVIALANKLH
ANGKLISAALSEGYGGANVPSSTFAAYDWINIMAYDATGPWAPGNPGQHSPYSMAVNQFNYWTGRGLPASKAIIGLPFYG
YGFGASANQGISYANIVAQYPGAENLDQVGNTIYYNGIPTIKQKTTFAVQNAGGVMIWELSQDATGAKSLLTAVDQVVKG
SNPPTGTGTLIQAENYNTMSGVQTEATTDTGGGLNVGYCDTGDWMAYYNINFPTSGNYIIEYRVASAVTGGRLSSDLNAG
TIQLGAVNVPNTGGWQNWQTITQTVNVNAGTYNFGIYVQNTGFNINWFRITKAASGLAAKSASADKIESLTVYPNPSEDT
LFFSAEVSGANVSIINSEGGATVSTQKANDNSINVSGLKSGIYLILVEKDGIKTVRRFIKK

Specific function: Unknown

COG id: COG5498

COG function: function code M; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-3 domain [H]

Homologues:

Organism=Drosophila melanogaster, GI45550474, Length=411, Percent_Identity=27.007299270073, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI116007452, Length=316, Percent_Identity=24.0506329113924, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21358195, Length=199, Percent_Identity=31.1557788944724, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221330815, Length=257, Percent_Identity=27.2373540856031, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 57729; Mature: 57729

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNYRRMLQKCMIILVLGLFNLASAQKKVIAYIPNWIDLNAFSSTIQYSKLTHINIAFE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECHHHHHEEEEEEEEEEEEEE
NPDANGYLSFNSGSNAIINAAHAQNIKVFVSLGGGSVSEGGAIRDNYFNLITPANRTAFI
CCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEECCCEEEECCCCHHHHH
QKIYDYVVAHNFDGVDVDLEGPAINGDYGGFVIALANKLHANGKLISAALSEGYGGANVP
HHHHHHHHHCCCCCEEEEECCCEECCCCCCEEEEEEHHHCCCCEEEEEHHHCCCCCCCCC
SSTFAAYDWINIMAYDATGPWAPGNPGQHSPYSMAVNQFNYWTGRGLPASKAIIGLPFYG
CCHHEEEEEEEEEEEECCCCCCCCCCCCCCCHHEEEECCEEECCCCCCCCCEEEECCCCC
YGFGASANQGISYANIVAQYPGAENLDQVGNTIYYNGIPTIKQKTTFAVQNAGGVMIWEL
CCCCCCCCCCCEEEHHEEECCCCCCHHHCCCEEEECCCCCCCCCEEEEEECCCCEEEEEE
SQDATGAKSLLTAVDQVVKGSNPPTGTGTLIQAENYNTMSGVQTEATTDTGGGLNVGYCD
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEEC
TGDWMAYYNINFPTSGNYIIEYRVASAVTGGRLSSDLNAGTIQLGAVNVPNTGGWQNWQT
CCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEE
ITQTVNVNAGTYNFGIYVQNTGFNINWFRITKAASGLAAKSASADKIESLTVYPNPSEDT
EEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCE
LFFSAEVSGANVSIINSEGGATVSTQKANDNSINVSGLKSGIYLILVEKDGIKTVRRFIK
EEEEEEECCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHC
K
C
>Mature Secondary Structure
MKNNYRRMLQKCMIILVLGLFNLASAQKKVIAYIPNWIDLNAFSSTIQYSKLTHINIAFE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECHHHHHEEEEEEEEEEEEEE
NPDANGYLSFNSGSNAIINAAHAQNIKVFVSLGGGSVSEGGAIRDNYFNLITPANRTAFI
CCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEECCCEEEECCCCHHHHH
QKIYDYVVAHNFDGVDVDLEGPAINGDYGGFVIALANKLHANGKLISAALSEGYGGANVP
HHHHHHHHHCCCCCEEEEECCCEECCCCCCEEEEEEHHHCCCCEEEEEHHHCCCCCCCCC
SSTFAAYDWINIMAYDATGPWAPGNPGQHSPYSMAVNQFNYWTGRGLPASKAIIGLPFYG
CCHHEEEEEEEEEEEECCCCCCCCCCCCCCCHHEEEECCEEECCCCCCCCCEEEECCCCC
YGFGASANQGISYANIVAQYPGAENLDQVGNTIYYNGIPTIKQKTTFAVQNAGGVMIWEL
CCCCCCCCCCCEEEHHEEECCCCCCHHHCCCEEEECCCCCCCCCEEEEEECCCCEEEEEE
SQDATGAKSLLTAVDQVVKGSNPPTGTGTLIQAENYNTMSGVQTEATTDTGGGLNVGYCD
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEEC
TGDWMAYYNINFPTSGNYIIEYRVASAVTGGRLSSDLNAGTIQLGAVNVPNTGGWQNWQT
CCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEE
ITQTVNVNAGTYNFGIYVQNTGFNINWFRITKAASGLAAKSASADKIESLTVYPNPSEDT
EEEEEECCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCE
LFFSAEVSGANVSIINSEGGATVSTQKANDNSINVSGLKSGIYLILVEKDGIKTVRRFIK
EEEEEEECCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2668886; 9371460 [H]