| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301895
Identifier: 146301895
GI number: 146301895
Start: 4989360
End: 4990346
Strand: Direct
Name: 146301895
Synonym: Fjoh_4159
Alternate gene names: NA
Gene position: 4989360-4990346 (Clockwise)
Preceding gene: 146301879
Following gene: 146301899
Centisome position: 81.83
GC content: 36.07
Gene sequence:
>987_bases ATGAAAATACTACCGCTGTTGTTAATCTTGATTTGCAGTACCAGCTGCCAGTCGCAAACTAATTCGAAAATGAACGAAAA CAAAACAAATCCGTTATTGTGTGATCCTGTAAATGGTATGTGCGAAATGCCGGCGGGTGAAATATCAAATGAAAAAACGG TTATTAAAACAGAAAATAAACCTGTAAAAATAATTTATTATACAGATCCTATTTGTTCTTCATGCTGGGGAATTGAGCCT CAGCTTCGAAAATTAAAACTGGAATATGGTGATTATTTTGAAATTGATTACAGAATGGGCGGTTTACTGCCGGATTGGAG TTACAATAGTGGCGGAATCAGTAAACCATCTGACGTAGCACATCATTGGGACGAAGCCAGTTTGCATTATGAAATGCCTA TTGATGGCGATGTCTGGCTTGAAGATCCGCTGGATTCTTCTTATCCGTCTTGTATTGCCATGAAAGCGGCGCAGATGCAG GATAAACAAAAGGCTATACATTTTATGCGGATTCTGCGTGAGAAATTGTATCTCGAAAAGAAAAATATTGCGAAATGGGA AAATATTGCCGAAGCTGCTAAACTGGCAGATCTGGATACCGAAAAGCTGAAAAAGGATTTTGAAATTGATGCTGTAAAGC TTTTTAGAAATGATCTAAACATGGCAAAAAATCTGAATGTAAGAGGTTTTCCGACTTTTTATTTTTCTGACGGAAATAAC AATCAATTAACAGTTTATGGCTCTAAACCTTATGCTTCTTACGAAAATGCCCTGCTTGTCCTGGTTCCTGATGCCAAAAA GAAAAAGTTTGAAAATAAAAATACTTTGTCTCTTTTTGAAGTTTACCCAACACTGGCTCCAAAAGAATATGCAGTTATTC AAGATATATCTCTTAAAGATGCCGAAATCATTCTCGAAGAATTGTTACGAAAAGGAAAACTGGATAAAAAAACCATTAAA AATGGTTCGCTGTACAGTATAAAATAG
Upstream 100 bases:
>100_bases TGTTTTCTGTAGTCATCTTTTTTAGACTAATTGACTGGTGATTAAATACGGACGAACTTTGCGTAAAAGTAAAAAACTAA GTGTAAATAAAACAGTTGTT
Downstream 100 bases:
>100_bases TTTTAAAAACAAAAGCCGTAAAAAGATCTTTACGGCTTTTGTTTTTATTTGATTTGATCATTAATCAATTTGACAATTTT ATCTGTTTCTGTTTTAAATT
Product: polyketide biosynthesis dithiol-disulfide isomerase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKILPLLLILICSTSCQSQTNSKMNENKTNPLLCDPVNGMCEMPAGEISNEKTVIKTENKPVKIIYYTDPICSSCWGIEP QLRKLKLEYGDYFEIDYRMGGLLPDWSYNSGGISKPSDVAHHWDEASLHYEMPIDGDVWLEDPLDSSYPSCIAMKAAQMQ DKQKAIHFMRILREKLYLEKKNIAKWENIAEAAKLADLDTEKLKKDFEIDAVKLFRNDLNMAKNLNVRGFPTFYFSDGNN NQLTVYGSKPYASYENALLVLVPDAKKKKFENKNTLSLFEVYPTLAPKEYAVIQDISLKDAEIILEELLRKGKLDKKTIK NGSLYSIK
Sequences:
>Translated_328_residues MKILPLLLILICSTSCQSQTNSKMNENKTNPLLCDPVNGMCEMPAGEISNEKTVIKTENKPVKIIYYTDPICSSCWGIEP QLRKLKLEYGDYFEIDYRMGGLLPDWSYNSGGISKPSDVAHHWDEASLHYEMPIDGDVWLEDPLDSSYPSCIAMKAAQMQ DKQKAIHFMRILREKLYLEKKNIAKWENIAEAAKLADLDTEKLKKDFEIDAVKLFRNDLNMAKNLNVRGFPTFYFSDGNN NQLTVYGSKPYASYENALLVLVPDAKKKKFENKNTLSLFEVYPTLAPKEYAVIQDISLKDAEIILEELLRKGKLDKKTIK NGSLYSIK >Mature_328_residues MKILPLLLILICSTSCQSQTNSKMNENKTNPLLCDPVNGMCEMPAGEISNEKTVIKTENKPVKIIYYTDPICSSCWGIEP QLRKLKLEYGDYFEIDYRMGGLLPDWSYNSGGISKPSDVAHHWDEASLHYEMPIDGDVWLEDPLDSSYPSCIAMKAAQMQ DKQKAIHFMRILREKLYLEKKNIAKWENIAEAAKLADLDTEKLKKDFEIDAVKLFRNDLNMAKNLNVRGFPTFYFSDGNN NQLTVYGSKPYASYENALLVLVPDAKKKKFENKNTLSLFEVYPTLAPKEYAVIQDISLKDAEIILEELLRKGKLDKKTIK NGSLYSIK
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0413 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023169 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 37448; Mature: 37448
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILPLLLILICSTSCQSQTNSKMNENKTNPLLCDPVNGMCEMPAGEISNEKTVIKTENK CCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCC PVKIIYYTDPICSSCWGIEPQLRKLKLEYGDYFEIDYRMGGLLPDWSYNSGGISKPSDVA CEEEEEECCCHHHHHCCCCHHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHH HHWDEASLHYEMPIDGDVWLEDPLDSSYPSCIAMKAAQMQDKQKAIHFMRILREKLYLEK HCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNIAKWENIAEAAKLADLDTEKLKKDFEIDAVKLFRNDLNMAKNLNVRGFPTFYFSDGNN HHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC NQLTVYGSKPYASYENALLVLVPDAKKKKFENKNTLSLFEVYPTLAPKEYAVIQDISLKD CEEEEEECCCCCCCCCEEEEEECCHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCH AEIILEELLRKGKLDKKTIKNGSLYSIK HHHHHHHHHHCCCCCHHHCCCCCEEEEC >Mature Secondary Structure MKILPLLLILICSTSCQSQTNSKMNENKTNPLLCDPVNGMCEMPAGEISNEKTVIKTENK CCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCC PVKIIYYTDPICSSCWGIEPQLRKLKLEYGDYFEIDYRMGGLLPDWSYNSGGISKPSDVA CEEEEEECCCHHHHHCCCCHHHHEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHH HHWDEASLHYEMPIDGDVWLEDPLDSSYPSCIAMKAAQMQDKQKAIHFMRILREKLYLEK HCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNIAKWENIAEAAKLADLDTEKLKKDFEIDAVKLFRNDLNMAKNLNVRGFPTFYFSDGNN HHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC NQLTVYGSKPYASYENALLVLVPDAKKKKFENKNTLSLFEVYPTLAPKEYAVIQDISLKD CEEEEEECCCCCCCCCEEEEEECCHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCH AEIILEELLRKGKLDKKTIKNGSLYSIK HHHHHHHHHHCCCCCHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]