| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301899
Identifier: 146301899
GI number: 146301899
Start: 4992387
End: 4992869
Strand: Direct
Name: 146301899
Synonym: Fjoh_4163
Alternate gene names: NA
Gene position: 4992387-4992869 (Clockwise)
Preceding gene: 146301895
Following gene: 146301900
Centisome position: 81.88
GC content: 34.16
Gene sequence:
>483_bases ATGGAAAAGCAAAACAACTTTGAATATGGTCAGACAGATCCTGACTATATCGATCAAAATACACTAATTGATGGTACTTA CTATAATGATGATCAATATAGTAAGGAGTTAACAAAGGAAAGTCCACAGGAATTTGGAGAAAGCGATCCAGATATAATTG AACAAAACACTCTTGTTGATAATGATAATTATGCAAGAGATGAGGACCAATATCAATATCAGGAGGAATTTATTGAAGAT CTGAATCATCCTGAACAGGATTTTGAAAAGAATACCAATATAAGAGCAGAAAATATCCCGAATCAGGAACGAATTGTAAA TGAAGATGATCTGATTACTAACGACGGTAATCGTGATGATTTTGATGATGATTCGGAACCAGATTATGATAATGATCTGG AAAAAGACAGTGATCTTGACGATGATGAGGAACTTGATGATTTTGATGCTGAGCATTATCCGGAAAATCATCCTAGAGAG TAG
Upstream 100 bases:
>100_bases GATGTTCAGCTGGTTCTCTTGTTAATTTTGTAAAAAACACAGTATTAGTTGCTGAACTTTTCGGCAAAAGGCAGAAAATA ATAACTAAAATAATCATGTT
Downstream 100 bases:
>100_bases AATAAAAATTAGTTTAAAAATATGGTTTTATGACTTTAGCAGCTCAAATTGTCTGGTTATTTGTTCTGGCTGTTCCTATA GCCTGTATAAGCTGGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MEKQNNFEYGQTDPDYIDQNTLIDGTYYNDDQYSKELTKESPQEFGESDPDIIEQNTLVDNDNYARDEDQYQYQEEFIED LNHPEQDFEKNTNIRAENIPNQERIVNEDDLITNDGNRDDFDDDSEPDYDNDLEKDSDLDDDEELDDFDAEHYPENHPRE
Sequences:
>Translated_160_residues MEKQNNFEYGQTDPDYIDQNTLIDGTYYNDDQYSKELTKESPQEFGESDPDIIEQNTLVDNDNYARDEDQYQYQEEFIED LNHPEQDFEKNTNIRAENIPNQERIVNEDDLITNDGNRDDFDDDSEPDYDNDLEKDSDLDDDEELDDFDAEHYPENHPRE >Mature_160_residues MEKQNNFEYGQTDPDYIDQNTLIDGTYYNDDQYSKELTKESPQEFGESDPDIIEQNTLVDNDNYARDEDQYQYQEEFIED LNHPEQDFEKNTNIRAENIPNQERIVNEDDLITNDGNRDDFDDDSEPDYDNDLEKDSDLDDDEELDDFDAEHYPENHPRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19098; Mature: 19098
Theoretical pI: Translated: 3.48; Mature: 3.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQNNFEYGQTDPDYIDQNTLIDGTYYNDDQYSKELTKESPQEFGESDPDIIEQNTLVD CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCHHHHCCCCCCHHCCCCEEC NDNYARDEDQYQYQEEFIEDLNHPEQDFEKNTNIRAENIPNQERIVNEDDLITNDGNRDD CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC FDDDSEPDYDNDLEKDSDLDDDEELDDFDAEHYPENHPRE CCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCC >Mature Secondary Structure MEKQNNFEYGQTDPDYIDQNTLIDGTYYNDDQYSKELTKESPQEFGESDPDIIEQNTLVD CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCHHHHCCCCCCHHCCCCEEC NDNYARDEDQYQYQEEFIEDLNHPEQDFEKNTNIRAENIPNQERIVNEDDLITNDGNRDD CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC FDDDSEPDYDNDLEKDSDLDDDEELDDFDAEHYPENHPRE CCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA