Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301853

Identifier: 146301853

GI number: 146301853

Start: 4949086

End: 4949922

Strand: Reverse

Name: 146301853

Synonym: Fjoh_4117

Alternate gene names: NA

Gene position: 4949922-4949086 (Counterclockwise)

Preceding gene: 146301854

Following gene: 146301850

Centisome position: 81.19

GC content: 33.81

Gene sequence:

>837_bases
ATGAATAACCGAATTGATTCTCATCAGCATTTTTGGAAATTTGATCCCGTTAGAGACAGCTGGATTGATGAAAGTATGTC
GAAAATTCAAAGAGATTTCCTTCCGGAAGATTTATTGCCTCTGCTTAAAGAAAACAAGTTTTCGGGTTGTGTAGCAGTTC
AGGCAAGTCAGTCTGAACATGAAACCCATTTTCTTGCAGATCTGGCTTCAAAAAATGATTTTATAAAAGGAATCGTAGGC
TGGGTTGATCTTCGTGCAGATAATATTTCAGATCGGTTGCGTCATTTTTCTTCGAATAAAACCATTAAAGGATTCCGACA
TGTTGTACAAGGTGAAGCCGATGATTTTATGTTTAGAGAAGATTTCCGCAACGGAATTTCGGCTTTAAAAGAGTTTGATT
TTACGTATGATATTTTGATTTTTCATCGTCAGTTACCAGCAGCGATAAGTTTGGTAAAAGATTTTCCAAACCAAAAGTTT
GTAATAGATCATATTGCAAAACCAGATATTAAATCAGGCATTATAGATTCATGGAAAAGCGGTATAGAAGAAATTGCAAA
ATACAATAATGTATGGTGTAAAGTTTCTGGAATGGTCACAGAAGCCGACTGGAAAAACTGGAAACCAGAAGATTTAAAAC
CGTACTTGGATGTAATTTTTGAAAATTTCCCAACAGATAAAATACTATACGGTTCAGATTGGCCGGTTCTAAATGTAGCT
TCTGATTATAATGAGGTTGTGAAAACTTTAGAAGATTATATTTCGAAATTTTCTATCGAAGACCAGAATAAAATTTGGTT
TGAAAATGCAGTTTCGTTTTATAATTTGAATCAATAA

Upstream 100 bases:

>100_bases
TTCTGATCGTTCATCTCATACTACAGGACAATTTGTTTTTGTAGATGGCGGTTACGTGCATTTAGATCGTGCTTTAATCA
ACGATGTAAACTAATTCAGG

Downstream 100 bases:

>100_bases
TTTTTTAGCCGCAGATTAAAGGATTTTCACAGATTTTTTTAATCATTTTAAGCCTTTAATCTGTGGCTAAATATATTTTA
CACGCAAACTTGTTAAACAT

Product: amidohydrolase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNNRIDSHQHFWKFDPVRDSWIDESMSKIQRDFLPEDLLPLLKENKFSGCVAVQASQSEHETHFLADLASKNDFIKGIVG
WVDLRADNISDRLRHFSSNKTIKGFRHVVQGEADDFMFREDFRNGISALKEFDFTYDILIFHRQLPAAISLVKDFPNQKF
VIDHIAKPDIKSGIIDSWKSGIEEIAKYNNVWCKVSGMVTEADWKNWKPEDLKPYLDVIFENFPTDKILYGSDWPVLNVA
SDYNEVVKTLEDYISKFSIEDQNKIWFENAVSFYNLNQ

Sequences:

>Translated_278_residues
MNNRIDSHQHFWKFDPVRDSWIDESMSKIQRDFLPEDLLPLLKENKFSGCVAVQASQSEHETHFLADLASKNDFIKGIVG
WVDLRADNISDRLRHFSSNKTIKGFRHVVQGEADDFMFREDFRNGISALKEFDFTYDILIFHRQLPAAISLVKDFPNQKF
VIDHIAKPDIKSGIIDSWKSGIEEIAKYNNVWCKVSGMVTEADWKNWKPEDLKPYLDVIFENFPTDKILYGSDWPVLNVA
SDYNEVVKTLEDYISKFSIEDQNKIWFENAVSFYNLNQ
>Mature_278_residues
MNNRIDSHQHFWKFDPVRDSWIDESMSKIQRDFLPEDLLPLLKENKFSGCVAVQASQSEHETHFLADLASKNDFIKGIVG
WVDLRADNISDRLRHFSSNKTIKGFRHVVQGEADDFMFREDFRNGISALKEFDFTYDILIFHRQLPAAISLVKDFPNQKF
VIDHIAKPDIKSGIIDSWKSGIEEIAKYNNVWCKVSGMVTEADWKNWKPEDLKPYLDVIFENFPTDKILYGSDWPVLNVA
SDYNEVVKTLEDYISKFSIEDQNKIWFENAVSFYNLNQ

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006992 [H]

Pfam domain/function: PF04909 Amidohydro_2 [H]

EC number: NA

Molecular weight: Translated: 32486; Mature: 32486

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRIDSHQHFWKFDPVRDSWIDESMSKIQRDFLPEDLLPLLKENKFSGCVAVQASQSEH
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCH
ETHFLADLASKNDFIKGIVGWVDLRADNISDRLRHFSSNKTIKGFRHVVQGEADDFMFRE
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
DFRNGISALKEFDFTYDILIFHRQLPAAISLVKDFPNQKFVIDHIAKPDIKSGIIDSWKS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHHHHHHH
GIEEIAKYNNVWCKVSGMVTEADWKNWKPEDLKPYLDVIFENFPTDKILYGSDWPVLNVA
HHHHHHHHCCEEEEEECEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEECH
SDYNEVVKTLEDYISKFSIEDQNKIWFENAVSFYNLNQ
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHCCCC
>Mature Secondary Structure
MNNRIDSHQHFWKFDPVRDSWIDESMSKIQRDFLPEDLLPLLKENKFSGCVAVQASQSEH
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCH
ETHFLADLASKNDFIKGIVGWVDLRADNISDRLRHFSSNKTIKGFRHVVQGEADDFMFRE
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
DFRNGISALKEFDFTYDILIFHRQLPAAISLVKDFPNQKFVIDHIAKPDIKSGIIDSWKS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHHHHHHH
GIEEIAKYNNVWCKVSGMVTEADWKNWKPEDLKPYLDVIFENFPTDKILYGSDWPVLNVA
HHHHHHHHCCEEEEEECEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEECH
SDYNEVVKTLEDYISKFSIEDQNKIWFENAVSFYNLNQ
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]