Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301835

Identifier: 146301835

GI number: 146301835

Start: 4917463

End: 4919847

Strand: Reverse

Name: 146301835

Synonym: Fjoh_4099

Alternate gene names: NA

Gene position: 4919847-4917463 (Counterclockwise)

Preceding gene: 146301836

Following gene: 146301834

Centisome position: 80.69

GC content: 35.26

Gene sequence:

>2385_bases
ATGCAACGAAGATTTCTCCTTCGTCGAAATGACAAAAAAACTTTAAAAAGAGTAAAATTGAAATACATTAAATACATACT
TCTCTTCACAACGCTTTGCCTCAAAGCGCAAATTCCTACGCTCGATAATTACAATCAGGTTTGGACAACGCAAAGCAACA
ATTCATCAGAATCTATGCCTTTGGGTGGCGGTGATATTGGTATGAATGTTTGGGTCGAGAAAGGTGATTTGTATTTCTAT
TTTTCGCGAAGCGGCACTTTTGATGAACATAATACTTTATTGAAACTAGGAAGAGTAAAAGTGACTTTAAGTCCGAATCC
GTTTGAAGGAAAAGATGGTTTTCATCAGGAATTAAAGCTCAAAGATGGTTATGTTTTAGTTGGGCAAAACAACACAAAAA
TAAAACTTTGGGTTGATGTTTTTAAACCGATTATTCATGTTGATTTAGAAAGTAAAAATCCGTTGAAAATGACTGCTTCT
TACGAAAGCTGGCGTTATCAAAATCGTTATCCAAAAGGAAAAGAAAACAACGCTAATTCATATAAATGGGCGCCTCAAGG
AGAACTTATTACATATAAAGATTCTATTTCGTTTGAAAATAATGGTGTCAAATTTTATCACAGAAATCGAGAAAATACTG
TTTTTGATGTAGCGGTAAAACAGCAGAAAATGGAATCGGTTAAAGACCAAATGCTGAACCCGATTGCGAATCTGACTTTT
GGTGGATTCATGAAAGGCGATAACTTAAAACCAGACGGAACATATCTTGGGAAATATCAGGATACGGATTTTAAAGGCTT
TACTTTATCAAGCATAAAACCATCCAAAAAACAGGCATTAGAAATTTATTTAAACACCAGTCAATCTGATTTTGTTGCTT
GGAATAATGGATTGAAAAGTTTCATTTCGGCAAATAAAAACACAGCAAAACAATCCGAAAAAAACACTCAAAAATGGTGG
AATAATTTCTGGAACCGTAGTTTTATTTTTACTCAAAAAAATCAGTCAACTGCAAAAGATTCGGTGTATCAAATTGGACA
GAATTATCAGTTGTTCAGATATATGCTTGGATGCAATGCGTACGGAAAATATCCAACCAAATTTAACGGCGGACTTTTTA
CCGTTGATCCTGTCCATACTAATAAAGACCTGAATTTCACACCCGATTTTAGAAATTGGGGAGGAGGAACTATGACAGCT
CAAAATCAGCGATTAGTTTATTTTCCGATGGTGAAAAGCGGTGATTTTGATATGATGAAATCACAATTGGATTATTACGT
AAGTCTTCAAAAAAATGCCGAATTACGTTCTAAAGTATATTGGAAACATAACGGATCTTCATTCACAGAACAATTAGAAA
ACTTTGGACTTCCAAATCCAGCTGAATACGAATGGACACGTCCCGCAGATTACGATCCGGGAATGGAATATAATGCGTGG
CTAGAATATGAATGGGATACGGTTTTAGAATTCTGCCAAATGATGTTACAGCAAAAAGAATATGCTGGAGAAGACATTCA
AAAATACAACCAATTCATTATAAGCTGTCTTAGATTTTTCGATGAACATTATCAATATTTAGCAAAGCAGAGAGGCAGAA
AAGCTTTGGATGGAAATGGAAAATTAATTCTTTTTCCGGGTTCGGGAGCTGAAACTTATAAAATGGCGAATAATGCCAAT
AGCACGATTTCGGCTTTGCAAGTTATTACAGAAAACCTTTTAAACCTTTCGGGTAACCACTTGTCAAAAGAAGAGTCAGA
ATATTTAAAAGCATTTCAAACGAGAATTCCGCCTTTGAATTTTGGGCAGATTGAAAATCATAAAGTTTTACTTCCTGCTA
AAACTTGGGAAAGAGTGAATAATTCAGAAGTTCCGCAATTATATCCCGTTTATCCGTGGGGAATTTACGGCGTAGGAAAA
CCTGATTTAAAAACGGCTTTAAATACTTGGAAATACGATTCTGATGCATTGAAATTTAGAAGTCATGTAGGTTGGAAACA
GGATAATATTTTCTCCGCTCGTTTGGGTTTAACCGAAGAAGCGATGAAATACAATACACTAAAAATGGCCAGTTCAGAAA
GACGTTTTCCAGCATTTTGGGGTCCTGGATTTGACTGGGTTCCAGATCATAATTGGGGCGGATCGGGGATGATTGGCATG
CAGGAAATGCTTTTGCAGGAAGCAGACGGGAAAATCTATCTTTTTCCAGCATGGCCAAAAGATTGGAACGTTCATTTTAA
ATTACATGCCAAACAAAATACAACAATTGAAGCCGAACTCATGAATGGAGAATTTAAGGTTTTAAAAGTAATTCCAGAAG
AAAGAAAAAAAGACATTATAAATCTGCTAGGAAAATCTGAAGCAGAGAAAACAAAATTAAACTAA

Upstream 100 bases:

>100_bases
TAATTGTTAATTGTAAATGATTAATGATGAGTTTAACGACTAGTTTGTCATTTCGACGAAGGAGGAATCTTCGCAAGTAG
CTCCGCAATCTTTGTCGATC

Downstream 100 bases:

>100_bases
CTATTGCTAATTAAAATGATAAAGAAATTAATAAGCGGTGCTGTTTTGTCCTTGCTTTTGACCACAAACGGACAAGCACA
ATCAGTTGCAAATACTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 794; Mature: 794

Protein sequence:

>794_residues
MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMPLGGGDIGMNVWVEKGDLYFY
FSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKLKDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTAS
YESWRYQNRYPKGKENNANSYKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF
GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKSFISANKNTAKQSEKNTQKWW
NNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNAYGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTA
QNQRLVYFPMVKSGDFDMMKSQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW
LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNGKLILFPGSGAETYKMANNAN
STISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLNFGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGK
PDLKTALNTWKYDSDALKFRSHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM
QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDIINLLGKSEAEKTKLN

Sequences:

>Translated_794_residues
MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMPLGGGDIGMNVWVEKGDLYFY
FSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKLKDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTAS
YESWRYQNRYPKGKENNANSYKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF
GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKSFISANKNTAKQSEKNTQKWW
NNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNAYGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTA
QNQRLVYFPMVKSGDFDMMKSQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW
LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNGKLILFPGSGAETYKMANNAN
STISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLNFGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGK
PDLKTALNTWKYDSDALKFRSHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM
QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDIINLLGKSEAEKTKLN
>Mature_794_residues
MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMPLGGGDIGMNVWVEKGDLYFY
FSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKLKDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTAS
YESWRYQNRYPKGKENNANSYKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF
GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKSFISANKNTAKQSEKNTQKWW
NNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNAYGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTA
QNQRLVYFPMVKSGDFDMMKSQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW
LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNGKLILFPGSGAETYKMANNAN
STISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLNFGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGK
PDLKTALNTWKYDSDALKFRSHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM
QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDIINLLGKSEAEKTKLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92105; Mature: 92105

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMP
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
LGGGDIGMNVWVEKGDLYFYFSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKL
CCCCCCCEEEEEECCCEEEEECCCCCCCHHHHEEEECEEEEEECCCCCCCCCCCCHHEEE
KDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTASYESWRYQNRYPKGKENNANS
CCCEEEECCCCCEEEEEHHHHCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCCCCCCC
YKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF
EEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKS
CCEECCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHH
FISANKNTAKQSEKNTQKWWNNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNA
HHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCC
YGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTAQNQRLVYFPMVKSGDFDMMK
CCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCHHHHH
SQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW
HHCCEEEEECCCCCCHHEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNG
EEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KLILFPGSGAETYKMANNANSTISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLN
EEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
FGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGKPDLKTALNTWKYDSDALKFR
CCCCCCCEEEEECHHHHHCCCCCCCEEEECCCCCEECCCCHHHHHHHHHCCCCCHHHHHH
SHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM
HHCCCCCCCEEEEECCCCHHHHHHHHEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHH
QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDII
HHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHH
NLLGKSEAEKTKLN
HHHCCCCCHHCCCC
>Mature Secondary Structure
MQRRFLLRRNDKKTLKRVKLKYIKYILLFTTLCLKAQIPTLDNYNQVWTTQSNNSSESMP
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
LGGGDIGMNVWVEKGDLYFYFSRSGTFDEHNTLLKLGRVKVTLSPNPFEGKDGFHQELKL
CCCCCCCEEEEEECCCEEEEECCCCCCCHHHHEEEECEEEEEECCCCCCCCCCCCHHEEE
KDGYVLVGQNNTKIKLWVDVFKPIIHVDLESKNPLKMTASYESWRYQNRYPKGKENNANS
CCCEEEECCCCCEEEEEHHHHCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCCCCCCC
YKWAPQGELITYKDSISFENNGVKFYHRNRENTVFDVAVKQQKMESVKDQMLNPIANLTF
EEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
GGFMKGDNLKPDGTYLGKYQDTDFKGFTLSSIKPSKKQALEIYLNTSQSDFVAWNNGLKS
CCEECCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHH
FISANKNTAKQSEKNTQKWWNNFWNRSFIFTQKNQSTAKDSVYQIGQNYQLFRYMLGCNA
HHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCC
YGKYPTKFNGGLFTVDPVHTNKDLNFTPDFRNWGGGTMTAQNQRLVYFPMVKSGDFDMMK
CCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCHHHHH
SQLDYYVSLQKNAELRSKVYWKHNGSSFTEQLENFGLPNPAEYEWTRPADYDPGMEYNAW
HHCCEEEEECCCCCCHHEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
LEYEWDTVLEFCQMMLQQKEYAGEDIQKYNQFIISCLRFFDEHYQYLAKQRGRKALDGNG
EEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KLILFPGSGAETYKMANNANSTISALQVITENLLNLSGNHLSKEESEYLKAFQTRIPPLN
EEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
FGQIENHKVLLPAKTWERVNNSEVPQLYPVYPWGIYGVGKPDLKTALNTWKYDSDALKFR
CCCCCCCEEEEECHHHHHCCCCCCCEEEECCCCCEECCCCHHHHHHHHHCCCCCHHHHHH
SHVGWKQDNIFSARLGLTEEAMKYNTLKMASSERRFPAFWGPGFDWVPDHNWGGSGMIGM
HHCCCCCCCEEEEECCCCHHHHHHHHEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHH
QEMLLQEADGKIYLFPAWPKDWNVHFKLHAKQNTTIEAELMNGEFKVLKVIPEERKKDII
HHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHH
NLLGKSEAEKTKLN
HHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA