Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301788

Identifier: 146301788

GI number: 146301788

Start: 4837726

End: 4838559

Strand: Direct

Name: 146301788

Synonym: Fjoh_4052

Alternate gene names: NA

Gene position: 4837726-4838559 (Clockwise)

Preceding gene: 146301787

Following gene: 146301789

Centisome position: 79.35

GC content: 35.01

Gene sequence:

>834_bases
ATGAAAAAATATATCAAATCACTCGCCATTATAACCGCATTTTTTGCAGCATCTCAAAGTTATGGTCAGGATAAAAAACA
GGAGTTTTCGATTTCATTGGGCGGTCCGTTTTCATTTATAAAATCTGCTGGAGTAGAATACGTTCCCGGAAACGGTATCA
ATGCAGGTCTTCGTTATTCTTACTATTTAAATGAAGGTTTGAGTTTAGGTGTTGGAGTTGAATACCAAACCTATACATCT
GACTCAAAATCTAACTTTATTTACGGGCAGTACAACACTGTCGATGCAGAAAATGAAGCTTTTCAGTTTAGATACAGGCT
TAGTAATTATAGAGAAGAACAAAAACTGACTTATATTAATGTTCCTATCAACATTCAGTTTGAAACTCCTGGAACCTCTA
AGCTGTATGTTTCTGCCGGAGCTAAAATAGGATTTGCTTCAAGCGGTACTTATCAGTCAACCATAGGCAACAGTACTACA
AGCGGTTATTATCCACAGTATAATGTAGAACTATTTAGTCCTGCATTTGCCGGATTTGCCAGCGTAAATGACCTAAAAAC
TTCTGAAAGAGACCTTGACACAAAAGTTTCGTATTCAGCAACTTTTGAGACAGGTTTAAAACAAGAATTAGGAAACAGAA
ATTCAATCTATATTGGAGCTTATCTGGACTATGGTTTAAATGATATTTACGACAAAAAAGACAGCAAAAATCTTGTTCAA
TACAATGCAGAATTACCTGTAGATTTACAATACAACAGCGTATTTGATTCTGGTATTGCAAGAAACATGAGATTGGTTTC
TTACGGTTTAAAGTTAAGATTCGCAATTCGTTAA

Upstream 100 bases:

>100_bases
GTTCTTGAAACTCCTAATGTAAAAAAATCTTTCAAAGTAATTGTAAAATAGATAAACCTGCCGGCACTCTAAAAGCAGTG
CCGGCATAATAAAATTTAAG

Downstream 100 bases:

>100_bases
TTACATACTAATTAATAAAAAGCTGCTCAGTTAATTTTGAGCAGCTTTTTTTGTATAAGCCTGTTTCAAAATTTTAAAGT
TCTCAAAACCTAACATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKYIKSLAIITAFFAASQSYGQDKKQEFSISLGGPFSFIKSAGVEYVPGNGINAGLRYSYYLNEGLSLGVGVEYQTYTS
DSKSNFIYGQYNTVDAENEAFQFRYRLSNYREEQKLTYINVPINIQFETPGTSKLYVSAGAKIGFASSGTYQSTIGNSTT
SGYYPQYNVELFSPAFAGFASVNDLKTSERDLDTKVSYSATFETGLKQELGNRNSIYIGAYLDYGLNDIYDKKDSKNLVQ
YNAELPVDLQYNSVFDSGIARNMRLVSYGLKLRFAIR

Sequences:

>Translated_277_residues
MKKYIKSLAIITAFFAASQSYGQDKKQEFSISLGGPFSFIKSAGVEYVPGNGINAGLRYSYYLNEGLSLGVGVEYQTYTS
DSKSNFIYGQYNTVDAENEAFQFRYRLSNYREEQKLTYINVPINIQFETPGTSKLYVSAGAKIGFASSGTYQSTIGNSTT
SGYYPQYNVELFSPAFAGFASVNDLKTSERDLDTKVSYSATFETGLKQELGNRNSIYIGAYLDYGLNDIYDKKDSKNLVQ
YNAELPVDLQYNSVFDSGIARNMRLVSYGLKLRFAIR
>Mature_277_residues
MKKYIKSLAIITAFFAASQSYGQDKKQEFSISLGGPFSFIKSAGVEYVPGNGINAGLRYSYYLNEGLSLGVGVEYQTYTS
DSKSNFIYGQYNTVDAENEAFQFRYRLSNYREEQKLTYINVPINIQFETPGTSKLYVSAGAKIGFASSGTYQSTIGNSTT
SGYYPQYNVELFSPAFAGFASVNDLKTSERDLDTKVSYSATFETGLKQELGNRNSIYIGAYLDYGLNDIYDKKDSKNLVQ
YNAELPVDLQYNSVFDSGIARNMRLVSYGLKLRFAIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30971; Mature: 30971

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYIKSLAIITAFFAASQSYGQDKKQEFSISLGGPFSFIKSAGVEYVPGNGINAGLRYS
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHCCCEEECCCCCCCCEEEE
YYLNEGLSLGVGVEYQTYTSDSKSNFIYGQYNTVDAENEAFQFRYRLSNYREEQKLTYIN
EEECCCCEEEECEEEEEECCCCCCCEEEEECCEECCCCCEEEEEEEHHCCCCCCCEEEEE
VPINIQFETPGTSKLYVSAGAKIGFASSGTYQSTIGNSTTSGYYPQYNVELFSPAFAGFA
CEEEEEECCCCCCEEEEECCCEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCHHHCCC
SVNDLKTSERDLDTKVSYSATFETGLKQELGNRNSIYIGAYLDYGLNDIYDKKDSKNLVQ
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCCCCEEE
YNAELPVDLQYNSVFDSGIARNMRLVSYGLKLRFAIR
ECCCCCEEEEECCHHHHHHHCCEEEEEECEEEEEEEC
>Mature Secondary Structure
MKKYIKSLAIITAFFAASQSYGQDKKQEFSISLGGPFSFIKSAGVEYVPGNGINAGLRYS
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHCCCEEECCCCCCCCEEEE
YYLNEGLSLGVGVEYQTYTSDSKSNFIYGQYNTVDAENEAFQFRYRLSNYREEQKLTYIN
EEECCCCEEEECEEEEEECCCCCCCEEEEECCEECCCCCEEEEEEEHHCCCCCCCEEEEE
VPINIQFETPGTSKLYVSAGAKIGFASSGTYQSTIGNSTTSGYYPQYNVELFSPAFAGFA
CEEEEEECCCCCCEEEEECCCEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCHHHCCC
SVNDLKTSERDLDTKVSYSATFETGLKQELGNRNSIYIGAYLDYGLNDIYDKKDSKNLVQ
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCCCCEEE
YNAELPVDLQYNSVFDSGIARNMRLVSYGLKLRFAIR
ECCCCCEEEEECCHHHHHHHCCEEEEEECEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA