Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301669

Identifier: 146301669

GI number: 146301669

Start: 4680283

End: 4682133

Strand: Reverse

Name: 146301669

Synonym: Fjoh_3931

Alternate gene names: NA

Gene position: 4682133-4680283 (Counterclockwise)

Preceding gene: 146301670

Following gene: 146301668

Centisome position: 76.8

GC content: 38.03

Gene sequence:

>1851_bases
ATGTTTACAAGTATATTAATTACTAAAAAACATGTTCTTATGGCAAGATTTTCAGATCAGGTAAAAATAACTATCGATGA
CTTTAGCAAAAATGTTGTTTATTATGACTTAGGGATCACTCAAAAAATGATGGATCACCATTATTTCTCTTTTGTCTGGC
AGCATGCGGCAGAAGCAGTTATTGATCCGCTAAAACAAGCCGCTGCAATTCGCAGATACCAGGGGCGGGAAGTTATTTTT
ACTTTTAAAAGCCTTACCGGAATCCAGTTAATGGCAAAAGGAATTATTACAAATCTCGAATCTTATGATGTCGGCGGAAG
TCCGGGCGGACTTTATGTAAAAGGAATAAGCCATACTATACTGCTTGATGATTTAAAAAAAGCCCGAACATTTTTAGACC
GTAACCTGCAGGAAATTGCGCTTGATATTTTTGCTAATGAAACTGCCGGCGAATTTTATAACAGAGAGGCAATAGCGCCT
ACTTTTACCACAATTTTTGATTACAAAGCGCAGTACAACGAAACAAGTTTTAACTTCCTGAAACGACTTTCCGCCTGTTA
CGGACAATGGCTGTATTTTGACGGAATGCGCATGCAGTTTGGGCAGCTCAAAAACAGTAAGGTAAAACTTATCAATGGAG
CTTCACTGCATAAATTTGGTATTCAGACTCATTTAGCATCGCATAAAACAGCTTTTGGAGCTTATGATTATAATAATGCA
AAACAAATTGTCAGTTCTCAGCCCAAAACAAATCAGGGAAGCGGTGACGGTTTTTCCAGAACAGCTTTAGACAGGCAGGC
ATCGGTCGCTCAGCCCAATTTGTTCGTTGCCGCTTTTACCAATCAGGTAAAAAATGCATCTCAAATAGAAGAAATGGTAA
AACTGCAAACGGCAGGCAGAGATGCAAACAGTGTTTTTTATACAGGTGTTTCGTATCTGCCAATAGGAGTGGGACAGATT
TTTATTATTCAAAACGAAACTGTCGAACATGAACTTGTAGCTGTAGAAGTTATACACCATTCTGAAGTTCACGGTAATTA
TACCTGTGAGTTCAAAGCGATTCCTGCCGATGTTTCGGCACCGTATTATACCAATGTAGAAATTTTTGCAAAAGCAGAAA
ACCAGCCCGCTATTGTAATAGACAACAATGATCCCGAAAGTTTAGGACGTGTAAAGGTCAGCTTTTACTGGGGAACAGGA
AGCACAAAAACTGAATGGATTCGTGTGATGCAGTATTATTCCGGTTCTTCAAGAGGAATGTACTGGAGACCAGAAATTGG
GGACGAAGTATTGGTAAGTTTTGAAAACGGCAACATTGACTTTCCTTATGTATCCGGTTCACACTACAACGGACAGGCAA
AACCTGAGTTTTTTGACAGCAAAAACAGTATTAAAGGCTGGAAACTCCGTTTCGGGATGTTACTAAAATTTGTTGAAAAA
GTAGGAATCTGGCTTTCTGACCCAAGCGGAAATGAAATTCATCTAGACGAAGAGAACAAAAACATAAACGCCACAACGCC
GGAAACTTTTACCATTAGAGCAAAAAATATTGTTTTTGAGGCAACGGAAAGTATTACAGTAAAAGCCGGAACTAATATTC
TCGAAACTGCGGGTATAAATAAAACTTTACAGGTTGGGGGGATTATGGATACTCAAGTTATAGGTAGTAATCTACTTCAT
GTAAAAGGAGACTTTCATGAACAAATTGACGGTGATCTCCATTCTGAGACAAAACAAGATAGAAATACAATAAGTCATTC
TGACTTTACTTCGCTAAGTCAAGAAAATGCTGAATTTCACTCAAAAAATGATATTCAAAATAATAGTACCGAGGATACTA
CACAAAATTAA

Upstream 100 bases:

>100_bases
ATTTAGACAGCCTTTTTGATTTATAAGCCTTCATTAAAAATTTACCTTATTCTGTTATAATAATACCTTTTAGAGGCTGT
TTCTGAAAATTTGTAAAGAT

Downstream 100 bases:

>100_bases
AAACTATTAAATTGAAATTAAAAGAATATGTCTAGGACAAGAATTGTAAAAGGGAAAATTACTGAAATTACAGGCGGAAC
TTCAAGAATTTTTGCGAAGA

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Rhs Element Vgr Protein Family Protein; Type VI Secretion System Vgr Family Protein; Rhs Family Protein; VgrG Protein; Two Component LuxR Family Transcriptional Regulator; Phage Protein D; Phosphoserine Phosphatase SerB; VgrG Family T6SS G; Rhs Element Vgr Family Protein

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MFTSILITKKHVLMARFSDQVKITIDDFSKNVVYYDLGITQKMMDHHYFSFVWQHAAEAVIDPLKQAAAIRRYQGREVIF
TFKSLTGIQLMAKGIITNLESYDVGGSPGGLYVKGISHTILLDDLKKARTFLDRNLQEIALDIFANETAGEFYNREAIAP
TFTTIFDYKAQYNETSFNFLKRLSACYGQWLYFDGMRMQFGQLKNSKVKLINGASLHKFGIQTHLASHKTAFGAYDYNNA
KQIVSSQPKTNQGSGDGFSRTALDRQASVAQPNLFVAAFTNQVKNASQIEEMVKLQTAGRDANSVFYTGVSYLPIGVGQI
FIIQNETVEHELVAVEVIHHSEVHGNYTCEFKAIPADVSAPYYTNVEIFAKAENQPAIVIDNNDPESLGRVKVSFYWGTG
STKTEWIRVMQYYSGSSRGMYWRPEIGDEVLVSFENGNIDFPYVSGSHYNGQAKPEFFDSKNSIKGWKLRFGMLLKFVEK
VGIWLSDPSGNEIHLDEENKNINATTPETFTIRAKNIVFEATESITVKAGTNILETAGINKTLQVGGIMDTQVIGSNLLH
VKGDFHEQIDGDLHSETKQDRNTISHSDFTSLSQENAEFHSKNDIQNNSTEDTTQN

Sequences:

>Translated_616_residues
MFTSILITKKHVLMARFSDQVKITIDDFSKNVVYYDLGITQKMMDHHYFSFVWQHAAEAVIDPLKQAAAIRRYQGREVIF
TFKSLTGIQLMAKGIITNLESYDVGGSPGGLYVKGISHTILLDDLKKARTFLDRNLQEIALDIFANETAGEFYNREAIAP
TFTTIFDYKAQYNETSFNFLKRLSACYGQWLYFDGMRMQFGQLKNSKVKLINGASLHKFGIQTHLASHKTAFGAYDYNNA
KQIVSSQPKTNQGSGDGFSRTALDRQASVAQPNLFVAAFTNQVKNASQIEEMVKLQTAGRDANSVFYTGVSYLPIGVGQI
FIIQNETVEHELVAVEVIHHSEVHGNYTCEFKAIPADVSAPYYTNVEIFAKAENQPAIVIDNNDPESLGRVKVSFYWGTG
STKTEWIRVMQYYSGSSRGMYWRPEIGDEVLVSFENGNIDFPYVSGSHYNGQAKPEFFDSKNSIKGWKLRFGMLLKFVEK
VGIWLSDPSGNEIHLDEENKNINATTPETFTIRAKNIVFEATESITVKAGTNILETAGINKTLQVGGIMDTQVIGSNLLH
VKGDFHEQIDGDLHSETKQDRNTISHSDFTSLSQENAEFHSKNDIQNNSTEDTTQN
>Mature_616_residues
MFTSILITKKHVLMARFSDQVKITIDDFSKNVVYYDLGITQKMMDHHYFSFVWQHAAEAVIDPLKQAAAIRRYQGREVIF
TFKSLTGIQLMAKGIITNLESYDVGGSPGGLYVKGISHTILLDDLKKARTFLDRNLQEIALDIFANETAGEFYNREAIAP
TFTTIFDYKAQYNETSFNFLKRLSACYGQWLYFDGMRMQFGQLKNSKVKLINGASLHKFGIQTHLASHKTAFGAYDYNNA
KQIVSSQPKTNQGSGDGFSRTALDRQASVAQPNLFVAAFTNQVKNASQIEEMVKLQTAGRDANSVFYTGVSYLPIGVGQI
FIIQNETVEHELVAVEVIHHSEVHGNYTCEFKAIPADVSAPYYTNVEIFAKAENQPAIVIDNNDPESLGRVKVSFYWGTG
STKTEWIRVMQYYSGSSRGMYWRPEIGDEVLVSFENGNIDFPYVSGSHYNGQAKPEFFDSKNSIKGWKLRFGMLLKFVEK
VGIWLSDPSGNEIHLDEENKNINATTPETFTIRAKNIVFEATESITVKAGTNILETAGINKTLQVGGIMDTQVIGSNLLH
VKGDFHEQIDGDLHSETKQDRNTISHSDFTSLSQENAEFHSKNDIQNNSTEDTTQN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69163; Mature: 69163

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTSILITKKHVLMARFSDQVKITIDDFSKNVVYYDLGITQKMMDHHYFSFVWQHAAEAV
CCCEEEEEHHHEEEEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
IDPLKQAAAIRRYQGREVIFTFKSLTGIQLMAKGIITNLESYDVGGSPGGLYVKGISHTI
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEE
LLDDLKKARTFLDRNLQEIALDIFANETAGEFYNREAIAPTFTTIFDYKAQYNETSFNFL
EHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHEECHHCCCCCHHHHH
KRLSACYGQWLYFDGMRMQFGQLKNSKVKLINGASLHKFGIQTHLASHKTAFGAYDYNNA
HHHHHHHCCEEEECCCHHHHCCCCCCCEEEEECCCEEHHHHHHHHHCCCCEECCCCCCCH
KQIVSSQPKTNQGSGDGFSRTALDRQASVAQPNLFVAAFTNQVKNASQIEEMVKLQTAGR
HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCC
DANSVFYTGVSYLPIGVGQIFIIQNETVEHELVAVEVIHHSEVHGNYTCEFKAIPADVSA
CCCEEEEECCEEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCC
PYYTNVEIFAKAENQPAIVIDNNDPESLGRVKVSFYWGTGSTKTEWIRVMQYYSGSSRGM
CEEECEEEEEECCCCCEEEEECCCCHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCE
YWRPEIGDEVLVSFENGNIDFPYVSGSHYNGQAKPEFFDSKNSIKGWKLRFGMLLKFVEK
EECCCCCCEEEEEEECCCEECCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VGIWLSDPSGNEIHLDEENKNINATTPETFTIRAKNIVFEATESITVKAGTNILETAGIN
CCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEEECCCEEEECCCCEEECCCCC
KTLQVGGIMDTQVIGSNLLHVKGDFHEQIDGDLHSETKQDRNTISHSDFTSLSQENAEFH
CEEEECCCEEHHHHCCCEEEEECCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC
SKNDIQNNSTEDTTQN
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFTSILITKKHVLMARFSDQVKITIDDFSKNVVYYDLGITQKMMDHHYFSFVWQHAAEAV
CCCEEEEEHHHEEEEECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
IDPLKQAAAIRRYQGREVIFTFKSLTGIQLMAKGIITNLESYDVGGSPGGLYVKGISHTI
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEE
LLDDLKKARTFLDRNLQEIALDIFANETAGEFYNREAIAPTFTTIFDYKAQYNETSFNFL
EHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHEECHHCCCCCHHHHH
KRLSACYGQWLYFDGMRMQFGQLKNSKVKLINGASLHKFGIQTHLASHKTAFGAYDYNNA
HHHHHHHCCEEEECCCHHHHCCCCCCCEEEEECCCEEHHHHHHHHHCCCCEECCCCCCCH
KQIVSSQPKTNQGSGDGFSRTALDRQASVAQPNLFVAAFTNQVKNASQIEEMVKLQTAGR
HHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCC
DANSVFYTGVSYLPIGVGQIFIIQNETVEHELVAVEVIHHSEVHGNYTCEFKAIPADVSA
CCCEEEEECCEEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCC
PYYTNVEIFAKAENQPAIVIDNNDPESLGRVKVSFYWGTGSTKTEWIRVMQYYSGSSRGM
CEEECEEEEEECCCCCEEEEECCCCHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCE
YWRPEIGDEVLVSFENGNIDFPYVSGSHYNGQAKPEFFDSKNSIKGWKLRFGMLLKFVEK
EECCCCCCEEEEEEECCCEECCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VGIWLSDPSGNEIHLDEENKNINATTPETFTIRAKNIVFEATESITVKAGTNILETAGIN
CCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEEECCCEEEECCCCEEECCCCC
KTLQVGGIMDTQVIGSNLLHVKGDFHEQIDGDLHSETKQDRNTISHSDFTSLSQENAEFH
CEEEECCCEEHHHHCCCEEEEECCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC
SKNDIQNNSTEDTTQN
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA