Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301668

Identifier: 146301668

GI number: 146301668

Start: 4678735

End: 4680255

Strand: Reverse

Name: 146301668

Synonym: Fjoh_3930

Alternate gene names: NA

Gene position: 4680255-4678735 (Counterclockwise)

Preceding gene: 146301669

Following gene: 146301667

Centisome position: 76.76

GC content: 31.76

Gene sequence:

>1521_bases
ATGTCTAGGACAAGAATTGTAAAAGGGAAAATTACTGAAATTACAGGCGGAACTTCAAGAATTTTTGCGAAGAGTATCAA
AATTAATTCAGGAAGAAGCATAAATTATTATGCTAAAAATTATACTTATGGTGAGCCACAAGACCCGCCTGCATCTAAAT
ATGCAGAGTTCGATATAGATTTTGAACTTAATATGGATGAGAATACTATGGTTCCCTTTGGTATTTTAGATTGTGAAAAT
AACATAGAAAATCCTTACTTCAGTTTTAAATATGCCTTAAGAAATGATGATATAGATTCTTTAGGCTTTAAAATTACAGA
CGAGGAAAATGAGATAATTTATCAAATGGGATATTTAAAACCTGTAATTATACAAGCCCGAAAAAAACCTTTAGTACTTT
TTGAAGCAAAAAAAACAACTGAAGGACCACTTATTTCAAAAACCTGGGAATATCAAAAAATTTTTGAACCTTATGTTTTA
ACTGAACCAGATTATACCAAAAAAGGTGAATATCATTTAAACTGGGATGGTTTTGATAATGATGAAATATACGACAGTAC
ACGTTTTGCAGGCAAAAAATTAAAAGCAACAATTACGGCAACTAAAGGGGACATTGTAAAAGCTAAAGAAATTGAACTTG
AAGTATCATATAGTGAAGTGGATTGGGTTGATATAAAAATTGACAAAACCGCAAAACGTATCGATGTTACACTAAGAGTG
AACCTAACAGATGGTGGAGAAATTGGATTGACCTGCCAGACTATAAATGCAAATATGTATGGAACACCTGCAAGGACAGT
TTGCGATTGGGATAAAATACCTACTCCAATAATAAACCCAAGTGATCCTATTATAAAAAGCAGGACAAGAAGCTTTTCAG
ATTTAGAAAAACTTGCCTTAGATGGATTGAACTATCACTGGGGAAGAAATAAAAATCATGCAGTAGCAAAAAATGTAAAT
ATTGGAAGTGATGTATTTGAACTATACATTAAAGCTGTTAATACTAAAAAATACACAATGAATGCGGTTAAGTTAACTTA
CAATACAAATAGTGATTGGATGCGTTCAGGAAATCCTAGCGAAGCTAAAGATGTTGTATCCACTTTTGGAAAAGTCATAT
CAGGACAGAGAATAGCATATAATATTGGATATTTGAATAATGTTGACTGGTATGAGATATCTAAACAAAATTGGTACTAT
GAAGATGAAAAGAAATATAAAGTTGATGAAAATTTTTCAGATACATCAGCACATGAGATAGGTCATACAATTCTTCAAGC
CTATGGTGGAACTGAATATTCTTATACTCATGCAGGCACTTCTTACATAACGCAAGAAGTTATCAAAATTAGTAATGGAG
GGAAAAGCTATTTCCATGAACTGAAAACAAAGGGAGAAATTGATTTAATGTACTACTATGAGGATGAACCATGGCCAGGA
AATCGTGATTATGCAAAATATGTTGCATCCGAAAAAGATGCCTTAAGTTTACTTTGGTTAACTAAAATAAAAATATCATG
A

Upstream 100 bases:

>100_bases
TCAAGAAAATGCTGAATTTCACTCAAAAAATGATATTCAAAATAATAGTACCGAGGATACTACACAAAATTAAAAACTAT
TAAATTGAAATTAAAAGAAT

Downstream 100 bases:

>100_bases
GAAGTTGTCTAATTATTTTTATGAATATCTTTTTTATATCGTGTAACAATGAATTAAAATATGGGTATGTATACGATATA
AAAATGAATGTTCCAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSRTRIVKGKITEITGGTSRIFAKSIKINSGRSINYYAKNYTYGEPQDPPASKYAEFDIDFELNMDENTMVPFGILDCEN
NIENPYFSFKYALRNDDIDSLGFKITDEENEIIYQMGYLKPVIIQARKKPLVLFEAKKTTEGPLISKTWEYQKIFEPYVL
TEPDYTKKGEYHLNWDGFDNDEIYDSTRFAGKKLKATITATKGDIVKAKEIELEVSYSEVDWVDIKIDKTAKRIDVTLRV
NLTDGGEIGLTCQTINANMYGTPARTVCDWDKIPTPIINPSDPIIKSRTRSFSDLEKLALDGLNYHWGRNKNHAVAKNVN
IGSDVFELYIKAVNTKKYTMNAVKLTYNTNSDWMRSGNPSEAKDVVSTFGKVISGQRIAYNIGYLNNVDWYEISKQNWYY
EDEKKYKVDENFSDTSAHEIGHTILQAYGGTEYSYTHAGTSYITQEVIKISNGGKSYFHELKTKGEIDLMYYYEDEPWPG
NRDYAKYVASEKDALSLLWLTKIKIS

Sequences:

>Translated_506_residues
MSRTRIVKGKITEITGGTSRIFAKSIKINSGRSINYYAKNYTYGEPQDPPASKYAEFDIDFELNMDENTMVPFGILDCEN
NIENPYFSFKYALRNDDIDSLGFKITDEENEIIYQMGYLKPVIIQARKKPLVLFEAKKTTEGPLISKTWEYQKIFEPYVL
TEPDYTKKGEYHLNWDGFDNDEIYDSTRFAGKKLKATITATKGDIVKAKEIELEVSYSEVDWVDIKIDKTAKRIDVTLRV
NLTDGGEIGLTCQTINANMYGTPARTVCDWDKIPTPIINPSDPIIKSRTRSFSDLEKLALDGLNYHWGRNKNHAVAKNVN
IGSDVFELYIKAVNTKKYTMNAVKLTYNTNSDWMRSGNPSEAKDVVSTFGKVISGQRIAYNIGYLNNVDWYEISKQNWYY
EDEKKYKVDENFSDTSAHEIGHTILQAYGGTEYSYTHAGTSYITQEVIKISNGGKSYFHELKTKGEIDLMYYYEDEPWPG
NRDYAKYVASEKDALSLLWLTKIKIS
>Mature_505_residues
SRTRIVKGKITEITGGTSRIFAKSIKINSGRSINYYAKNYTYGEPQDPPASKYAEFDIDFELNMDENTMVPFGILDCENN
IENPYFSFKYALRNDDIDSLGFKITDEENEIIYQMGYLKPVIIQARKKPLVLFEAKKTTEGPLISKTWEYQKIFEPYVLT
EPDYTKKGEYHLNWDGFDNDEIYDSTRFAGKKLKATITATKGDIVKAKEIELEVSYSEVDWVDIKIDKTAKRIDVTLRVN
LTDGGEIGLTCQTINANMYGTPARTVCDWDKIPTPIINPSDPIIKSRTRSFSDLEKLALDGLNYHWGRNKNHAVAKNVNI
GSDVFELYIKAVNTKKYTMNAVKLTYNTNSDWMRSGNPSEAKDVVSTFGKVISGQRIAYNIGYLNNVDWYEISKQNWYYE
DEKKYKVDENFSDTSAHEIGHTILQAYGGTEYSYTHAGTSYITQEVIKISNGGKSYFHELKTKGEIDLMYYYEDEPWPGN
RDYAKYVASEKDALSLLWLTKIKIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58035; Mature: 57904

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTRIVKGKITEITGGTSRIFAKSIKINSGRSINYYAKNYTYGEPQDPPASKYAEFDID
CCCCEEEECEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE
FELNMDENTMVPFGILDCENNIENPYFSFKYALRNDDIDSLGFKITDEENEIIYQMGYLK
EEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHCCEEEECCCCCEEEEECCCC
PVIIQARKKPLVLFEAKKTTEGPLISKTWEYQKIFEPYVLTEPDYTKKGEYHLNWDGFDN
EEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCEEEECCCCCC
DEIYDSTRFAGKKLKATITATKGDIVKAKEIELEVSYSEVDWVDIKIDKTAKRIDVTLRV
CCCCCCHHHCCCEEEEEEEECCCCEEEEEEEEEEEEECCEEEEEEEECCCCEEEEEEEEE
NLTDGGEIGLTCQTINANMYGTPARTVCDWDKIPTPIINPSDPIIKSRTRSFSDLEKLAL
EECCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH
DGLNYHWGRNKNHAVAKNVNIGSDVFELYIKAVNTKKYTMNAVKLTYNTNSDWMRSGNPS
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHCCCCCH
EAKDVVSTFGKVISGQRIAYNIGYLNNVDWYEISKQNWYYEDEKKYKVDENFSDTSAHEI
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCEECCCCCEECCCCCCCCHHHHH
GHTILQAYGGTEYSYTHAGTSYITQEVIKISNGGKSYFHELKTKGEIDLMYYYEDEPWPG
HHHHHHHHCCCCEEEECCCHHHHHHHHHEECCCCHHHHHHHCCCCCEEEEEEECCCCCCC
NRDYAKYVASEKDALSLLWLTKIKIS
CCHHHHHHCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure 
SRTRIVKGKITEITGGTSRIFAKSIKINSGRSINYYAKNYTYGEPQDPPASKYAEFDID
CCCEEEECEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE
FELNMDENTMVPFGILDCENNIENPYFSFKYALRNDDIDSLGFKITDEENEIIYQMGYLK
EEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHCCEEEECCCCCEEEEECCCC
PVIIQARKKPLVLFEAKKTTEGPLISKTWEYQKIFEPYVLTEPDYTKKGEYHLNWDGFDN
EEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCEEEECCCCCC
DEIYDSTRFAGKKLKATITATKGDIVKAKEIELEVSYSEVDWVDIKIDKTAKRIDVTLRV
CCCCCCHHHCCCEEEEEEEECCCCEEEEEEEEEEEEECCEEEEEEEECCCCEEEEEEEEE
NLTDGGEIGLTCQTINANMYGTPARTVCDWDKIPTPIINPSDPIIKSRTRSFSDLEKLAL
EECCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH
DGLNYHWGRNKNHAVAKNVNIGSDVFELYIKAVNTKKYTMNAVKLTYNTNSDWMRSGNPS
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHCCCCCH
EAKDVVSTFGKVISGQRIAYNIGYLNNVDWYEISKQNWYYEDEKKYKVDENFSDTSAHEI
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCEECCCCCEECCCCCCCCHHHHH
GHTILQAYGGTEYSYTHAGTSYITQEVIKISNGGKSYFHELKTKGEIDLMYYYEDEPWPG
HHHHHHHHCCCCEEEECCCHHHHHHHHHEECCCCHHHHHHHCCCCCEEEEEEECCCCCCC
NRDYAKYVASEKDALSLLWLTKIKIS
CCHHHHHHCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA