| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301667
Identifier: 146301667
GI number: 146301667
Start: 4678415
End: 4678738
Strand: Reverse
Name: 146301667
Synonym: Fjoh_3929
Alternate gene names: NA
Gene position: 4678738-4678415 (Counterclockwise)
Preceding gene: 146301668
Following gene: 146301666
Centisome position: 76.74
GC content: 25.93
Gene sequence:
>324_bases ATGAGAAGTTGTCTAATTATTTTTATGAATATCTTTTTTATATCGTGTAACAATGAATTAAAATATGGGTATGTATACGA TATAAAAATGAATGTTCCAATTGAAAATGTTAAAGTGTTTGATGCTGATAACAATATCACAAGTTATACAAATAAAGATG GTTATTTTGAATTGTCATATACCCAAAATTACCCTTCCAAGCTAATTTTTAGTGCAAAAAACTATAAAATTGATACCCTT CCTTCTTTTGGATGTAGTAATTCAGGAGAGACATCAAATAAATGTTTTAGAGGACAAAGAATTTATCTTTATCCTCAGAA ATAA
Upstream 100 bases:
>100_bases ATGAGGATGAACCATGGCCAGGAAATCGTGATTATGCAAAATATGTTGCATCCGAAAAAGATGCCTTAAGTTTACTTTGG TTAACTAAAATAAAAATATC
Downstream 100 bases:
>100_bases ATTCTATACTATATATATTTGATTTTATTAGTGAATTGAGTATTCCCTGCTGGCGCGAGCGTCTCACTCGTGTAATATTC CTTTTGAATTAACCACGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRSCLIIFMNIFFISCNNELKYGYVYDIKMNVPIENVKVFDADNNITSYTNKDGYFELSYTQNYPSKLIFSAKNYKIDTL PSFGCSNSGETSNKCFRGQRIYLYPQK
Sequences:
>Translated_107_residues MRSCLIIFMNIFFISCNNELKYGYVYDIKMNVPIENVKVFDADNNITSYTNKDGYFELSYTQNYPSKLIFSAKNYKIDTL PSFGCSNSGETSNKCFRGQRIYLYPQK >Mature_107_residues MRSCLIIFMNIFFISCNNELKYGYVYDIKMNVPIENVKVFDADNNITSYTNKDGYFELSYTQNYPSKLIFSAKNYKIDTL PSFGCSNSGETSNKCFRGQRIYLYPQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12500; Mature: 12500
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSCLIIFMNIFFISCNNELKYGYVYDIKMNVPIENVKVFDADNNITSYTNKDGYFELSY CCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCEEEEECCCCEEEECCCCCEEEEEE TQNYPSKLIFSAKNYKIDTLPSFGCSNSGETSNKCFRGQRIYLYPQK CCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEECCCEEEEEECC >Mature Secondary Structure MRSCLIIFMNIFFISCNNELKYGYVYDIKMNVPIENVKVFDADNNITSYTNKDGYFELSY CCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCEEEEECCCCEEEECCCCCEEEEEE TQNYPSKLIFSAKNYKIDTLPSFGCSNSGETSNKCFRGQRIYLYPQK CCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA