| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301478
Identifier: 146301478
GI number: 146301478
Start: 4434815
End: 4435222
Strand: Reverse
Name: 146301478
Synonym: Fjoh_3737
Alternate gene names: NA
Gene position: 4435222-4434815 (Counterclockwise)
Preceding gene: 146301479
Following gene: 146301477
Centisome position: 72.75
GC content: 40.93
Gene sequence:
>408_bases ATGAAAACTTTAAATTTTGCATCAGCCGCAGTTTCTGCTCTCAGCTTTTTAGCATTGATTCTTACAAGTACTGTTTCTGC TCAGCAATCAGGAATAAAACGTACAGATTTACAACGTTACGATCTTACTGTACCGGGATACCAAACGGTTCAGGCACGCA TCGATTTTGAAGCTCATACCGCTTTTGGAAAACACTCTCACCCCGGTGAGGAGGTTATTTATGTCCTTGATGGCGTACTA GAGTATGAAGTTGAAGGTCAGTCTGCTGTTAGGTTAAAGGCTGGGGAAGTACTTTTTATTCCGGCTGGCGTAGTTCACTC AGCAAGAAATAACAGCCATGTAAAAGCTTCTGAGCTGGCAACATATATAGTAGAAAAAGGAAAACCAGTTTTGGTAATGC AAAAGTAA
Upstream 100 bases:
>100_bases TCAGTTTGTCCATCTGGGCAATATTATTAGTTCAATGCAGGTAATGCCATGGTACTTTTGACAAGGAAATTAATAAAACA AATACATAAAATTATACAAT
Downstream 100 bases:
>100_bases AGAGCTGATTATTATTAAAATTTATAACAACATAAAATTATTAATCTGATTTATAATTAAAGAAACCGCAATTTTGTCCG GTCAATAAGAAATAAAAAAA
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel; Cupin Region
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKTLNFASAAVSALSFLALILTSTVSAQQSGIKRTDLQRYDLTVPGYQTVQARIDFEAHTAFGKHSHPGEEVIYVLDGVL EYEVEGQSAVRLKAGEVLFIPAGVVHSARNNSHVKASELATYIVEKGKPVLVMQK
Sequences:
>Translated_135_residues MKTLNFASAAVSALSFLALILTSTVSAQQSGIKRTDLQRYDLTVPGYQTVQARIDFEAHTAFGKHSHPGEEVIYVLDGVL EYEVEGQSAVRLKAGEVLFIPAGVVHSARNNSHVKASELATYIVEKGKPVLVMQK >Mature_135_residues MKTLNFASAAVSALSFLALILTSTVSAQQSGIKRTDLQRYDLTVPGYQTVQARIDFEAHTAFGKHSHPGEEVIYVLDGVL EYEVEGQSAVRLKAGEVLFIPAGVVHSARNNSHVKASELATYIVEKGKPVLVMQK
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14657; Mature: 14657
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLNFASAAVSALSFLALILTSTVSAQQSGIKRTDLQRYDLTVPGYQTVQARIDFEAHT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCHHHC AFGKHSHPGEEVIYVLDGVLEYEVEGQSAVRLKAGEVLFIPAGVVHSARNNSHVKASELA CCCCCCCCCHHEEEEECCEEEEEECCCEEEEEECCCEEEEECCCEECCCCCCCCCHHHHH TYIVEKGKPVLVMQK HHHHHCCCEEEEEEC >Mature Secondary Structure MKTLNFASAAVSALSFLALILTSTVSAQQSGIKRTDLQRYDLTVPGYQTVQARIDFEAHT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCHHHC AFGKHSHPGEEVIYVLDGVLEYEVEGQSAVRLKAGEVLFIPAGVVHSARNNSHVKASELA CCCCCCCCCHHEEEEECCEEEEEECCCEEEEEECCCEEEEECCCEECCCCCCCCCHHHHH TYIVEKGKPVLVMQK HHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA