| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301479
Identifier: 146301479
GI number: 146301479
Start: 4435381
End: 4436679
Strand: Reverse
Name: 146301479
Synonym: Fjoh_3738
Alternate gene names: NA
Gene position: 4436679-4435381 (Counterclockwise)
Preceding gene: 146301481
Following gene: 146301478
Centisome position: 72.77
GC content: 39.8
Gene sequence:
>1299_bases ATGACTAATACTAAAAGTAAAGCCATCATCAATGCCAATGTATTTGATGGCAAAAATGTAATTGGTAAAAAAACAGTTGT CTTTAGTGGCGGGGTAATTACTTCAATTTTAAATGACTTACCAGCTGACATAGATGATGTGATTGACGGTGAAGGCTGTA CTCTGCTGCCTGGTTTAATAGATGCCCATGTGCATACCTCTGTAGAGTTTTTAAAAGATGCATTAAAATTTGGTATAACT ACCGAATTGGAAATGATGGGAGGATTTACAAGTAAAGGACGTGAAAGCCAATTAATAGGAGTTACCGGTGCTGCCGATGT GCGTTCTGCTGGTATGGGCCTGACAGCTCCCGGCGGTCATCCTGACGAACTTATTCCTAAAGGTGACGGCATTCCTGAAT TTGTCTTAAAAGAAATGGAGAAAATGACTGAAGAAGAAAAGGCCGTTTTTGCAGCTGCCCACCAGGCTCAAAAAAAAGAA GAAGAATTAAGTGCAGATGTTACTTCACTTAACGGAGCGATAGATTTTGTGCGTCGTCAGGTAAATAACGGCGCTGATTA TTTTAAAATAATGATTGAAGAAGGAACTGTAATGAATGCACCTGGATTACCTCTCATTGAAACTCCTGTATTACAGGCAG CGGTAGACGAAGCTCATAAATTAGGCAAAATTGCCATAGCCCACGTTTTAACAGCAGAGGCGGCAAAAACGGCGGTTGAA ATTGGTGTTGATGGTTTGGCACATTTGTTTATTGACAGACCAGATTGGACGCAAGATCTTATTGAAGCCATCGCCAGCAA AGGAATTTTCGTAACACCCTGCCTGGTATTGAATTCATCGATTATAGGAAATTCTGCCTGTCATGTTGCACATGATGAAA GAGTTGAAAATAAATTGAATGAAGACTGGAAAATGACAATGTGTTCTTGTTTCAATACTTTTCCAGAAGGCAGTATGGAG GATAACTTTAATAATGTGAAGGATTTGCATGATGCTGGAGTAGATATACTTGCTGGAACAGACGTTTCAGTACCGATGCC CCATTTAGGAGGTCTTGCCCATGGTGTGAGCGTTCATCACGAAATGCAGCTGTTGGTACAAGCCGGATTAAGCCCCATTG AAGCATTACAATCTGCAACATCGGTAACTTCCAAAAGATTTAATTTATCGGACAGAGGATTAATTGCTGAAGGAATGAGA GCTGATTTGTTATTAGTAAAAGGTGATCCTACTAAAAATATTTCAGATTCTCTGTCTATAATGGGTATATGGAAAGAAGG AGAATCTTATTACAGCTAG
Upstream 100 bases:
>100_bases ATTAGAATGACCTTTTAGAGCTATTATTGTGCCAAATGTAGCTATTTTAATCATTATTGACTAGATAACTTTGTCGGAAA ATTATTTTAAACGATTCAAA
Downstream 100 bases:
>100_bases TTTTACAGGATTGCTTTATTCATAATACTCATAACGCCGCTTTTGTCCACTTCATTTCTCAGTTTGTCCATCTGGGCAAT ATTATTAGTTCAATGCAGGT
Product: amidohydrolase
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Organophosphate Acid Anhydrase; Pro-Hyp Dipeptidase; Imidazolonepropionase; M38 Family Protein; Hydrolase; Amidohydrolase Domain Protein; Organophopsphate Acid Anhydrase; Metal-Dependent Hydrolase; Xaa-Pro Dipeptidase Family; Prolidase; Amidohydrolase Imidazolonepropionase; ABC-2 Type Transporter; Amidohydrolase Family; Aryldialkylphosphatase; Imidazolonepropionase And Related Amidohydrolase
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTNTKSKAIINANVFDGKNVIGKKTVVFSGGVITSILNDLPADIDDVIDGEGCTLLPGLIDAHVHTSVEFLKDALKFGIT TELEMMGGFTSKGRESQLIGVTGAADVRSAGMGLTAPGGHPDELIPKGDGIPEFVLKEMEKMTEEEKAVFAAAHQAQKKE EELSADVTSLNGAIDFVRRQVNNGADYFKIMIEEGTVMNAPGLPLIETPVLQAAVDEAHKLGKIAIAHVLTAEAAKTAVE IGVDGLAHLFIDRPDWTQDLIEAIASKGIFVTPCLVLNSSIIGNSACHVAHDERVENKLNEDWKMTMCSCFNTFPEGSME DNFNNVKDLHDAGVDILAGTDVSVPMPHLGGLAHGVSVHHEMQLLVQAGLSPIEALQSATSVTSKRFNLSDRGLIAEGMR ADLLLVKGDPTKNISDSLSIMGIWKEGESYYS
Sequences:
>Translated_432_residues MTNTKSKAIINANVFDGKNVIGKKTVVFSGGVITSILNDLPADIDDVIDGEGCTLLPGLIDAHVHTSVEFLKDALKFGIT TELEMMGGFTSKGRESQLIGVTGAADVRSAGMGLTAPGGHPDELIPKGDGIPEFVLKEMEKMTEEEKAVFAAAHQAQKKE EELSADVTSLNGAIDFVRRQVNNGADYFKIMIEEGTVMNAPGLPLIETPVLQAAVDEAHKLGKIAIAHVLTAEAAKTAVE IGVDGLAHLFIDRPDWTQDLIEAIASKGIFVTPCLVLNSSIIGNSACHVAHDERVENKLNEDWKMTMCSCFNTFPEGSME DNFNNVKDLHDAGVDILAGTDVSVPMPHLGGLAHGVSVHHEMQLLVQAGLSPIEALQSATSVTSKRFNLSDRGLIAEGMR ADLLLVKGDPTKNISDSLSIMGIWKEGESYYS >Mature_431_residues TNTKSKAIINANVFDGKNVIGKKTVVFSGGVITSILNDLPADIDDVIDGEGCTLLPGLIDAHVHTSVEFLKDALKFGITT ELEMMGGFTSKGRESQLIGVTGAADVRSAGMGLTAPGGHPDELIPKGDGIPEFVLKEMEKMTEEEKAVFAAAHQAQKKEE ELSADVTSLNGAIDFVRRQVNNGADYFKIMIEEGTVMNAPGLPLIETPVLQAAVDEAHKLGKIAIAHVLTAEAAKTAVEI GVDGLAHLFIDRPDWTQDLIEAIASKGIFVTPCLVLNSSIIGNSACHVAHDERVENKLNEDWKMTMCSCFNTFPEGSMED NFNNVKDLHDAGVDILAGTDVSVPMPHLGGLAHGVSVHHEMQLLVQAGLSPIEALQSATSVTSKRFNLSDRGLIAEGMRA DLLLVKGDPTKNISDSLSIMGIWKEGESYYS
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46171; Mature: 46040
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTKSKAIINANVFDGKNVIGKKTVVFSGGVITSILNDLPADIDDVIDGEGCTLLPGLI CCCCCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHCCCCCCEECCHHH DAHVHTSVEFLKDALKFGITTELEMMGGFTSKGRESQLIGVTGAADVRSAGMGLTAPGGH HHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCC PDELIPKGDGIPEFVLKEMEKMTEEEKAVFAAAHQAQKKEEELSADVTSLNGAIDFVRRQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNNGADYFKIMIEEGTVMNAPGLPLIETPVLQAAVDEAHKLGKIAIAHVLTAEAAKTAVE HCCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVDGLAHLFIDRPDWTQDLIEAIASKGIFVTPCLVLNSSIIGNSACHVAHDERVENKLN HCCCHHHHHEECCCCHHHHHHHHHHHCCCEEEHHHHHCCHHCCCCCEECCHHHHHHHHCC EDWKMTMCSCFNTFPEGSMEDNFNNVKDLHDAGVDILAGTDVSVPMPHLGGLAHGVSVHH CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHCCHHHHHHHHH EMQLLVQAGLSPIEALQSATSVTSKRFNLSDRGLIAEGMRADLLLVKGDPTKNISDSLSI HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE MGIWKEGESYYS EEEEECCCCCCC >Mature Secondary Structure TNTKSKAIINANVFDGKNVIGKKTVVFSGGVITSILNDLPADIDDVIDGEGCTLLPGLI CCCCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHCCCCCCEECCHHH DAHVHTSVEFLKDALKFGITTELEMMGGFTSKGRESQLIGVTGAADVRSAGMGLTAPGGH HHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCC PDELIPKGDGIPEFVLKEMEKMTEEEKAVFAAAHQAQKKEEELSADVTSLNGAIDFVRRQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNNGADYFKIMIEEGTVMNAPGLPLIETPVLQAAVDEAHKLGKIAIAHVLTAEAAKTAVE HCCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVDGLAHLFIDRPDWTQDLIEAIASKGIFVTPCLVLNSSIIGNSACHVAHDERVENKLN HCCCHHHHHEECCCCHHHHHHHHHHHCCCEEEHHHHHCCHHCCCCCEECCHHHHHHHHCC EDWKMTMCSCFNTFPEGSMEDNFNNVKDLHDAGVDILAGTDVSVPMPHLGGLAHGVSVHH CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHCCHHHHHHHHH EMQLLVQAGLSPIEALQSATSVTSKRFNLSDRGLIAEGMRADLLLVKGDPTKNISDSLSI HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE MGIWKEGESYYS EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA