Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yljA [C]

Identifier: 146301250

GI number: 146301250

Start: 4183714

End: 4183989

Strand: Direct

Name: yljA [C]

Synonym: Fjoh_3508

Alternate gene names: 146301250

Gene position: 4183714-4183989 (Clockwise)

Preceding gene: 146301249

Following gene: 146301251

Centisome position: 68.62

GC content: 36.23

Gene sequence:

>276_bases
ATGAGTACTAAAGAGAAAGTAAGAGAAAAAGTCCGCGAGAAAGAAGCGGCTGTGTTCAATAATGAAATCATTATGTATAA
CGATGATGTAAATACATTTGACCACGTTATTGATACTTTAATGCGCGTTTGTGACCATACGGCAGAACAAGCCGAACAAT
GTTCCTTAATTGTACATTACAACGGAAAATGCACTGTAAAAACAGGCCCAATAGAAAAACTTAAACCTCAATGTACACAA
CTTTTGGAAGCTGGACTAAGCGCTGAAATTGTTTAA

Upstream 100 bases:

>100_bases
AAAAAGGTTTGACGTATGTTAAAAAGTTACAAAGAAACAACTGGGTTTCATTAAAATACGTAAATTAGATAGTAATTACA
AAGTACAAAAACTAGATAAG

Downstream 100 bases:

>100_bases
TTTACCAATAATTTAAAAAACATTCTATTTTATTTTATATTTGAAATAAAATAGAATGTTTTTTTATGGAAGAATATGGT
AAAATATTAATTATTGCAAT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: ATP-Dependent Clp Protease Adaptor Protein Clps; ATP-Dependent Clp Protease Adaptor Protein; Ribosomal Methyltransferase

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSTKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYNGKCTVKTGPIEKLKPQCTQ
LLEAGLSAEIV

Sequences:

>Translated_91_residues
MSTKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYNGKCTVKTGPIEKLKPQCTQ
LLEAGLSAEIV
>Mature_90_residues
STKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYNGKCTVKTGPIEKLKPQCTQL
LEAGLSAEIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10311; Mature: 10180

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHY
CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NGKCTVKTGPIEKLKPQCTQLLEAGLSAEIV
CCEEEEECCCHHHCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHY
CCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NGKCTVKTGPIEKLKPQCTQLLEAGLSAEIV
CCEEEEECCCHHHCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA