| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yljA [C]
Identifier: 146301250
GI number: 146301250
Start: 4183714
End: 4183989
Strand: Direct
Name: yljA [C]
Synonym: Fjoh_3508
Alternate gene names: 146301250
Gene position: 4183714-4183989 (Clockwise)
Preceding gene: 146301249
Following gene: 146301251
Centisome position: 68.62
GC content: 36.23
Gene sequence:
>276_bases ATGAGTACTAAAGAGAAAGTAAGAGAAAAAGTCCGCGAGAAAGAAGCGGCTGTGTTCAATAATGAAATCATTATGTATAA CGATGATGTAAATACATTTGACCACGTTATTGATACTTTAATGCGCGTTTGTGACCATACGGCAGAACAAGCCGAACAAT GTTCCTTAATTGTACATTACAACGGAAAATGCACTGTAAAAACAGGCCCAATAGAAAAACTTAAACCTCAATGTACACAA CTTTTGGAAGCTGGACTAAGCGCTGAAATTGTTTAA
Upstream 100 bases:
>100_bases AAAAAGGTTTGACGTATGTTAAAAAGTTACAAAGAAACAACTGGGTTTCATTAAAATACGTAAATTAGATAGTAATTACA AAGTACAAAAACTAGATAAG
Downstream 100 bases:
>100_bases TTTACCAATAATTTAAAAAACATTCTATTTTATTTTATATTTGAAATAAAATAGAATGTTTTTTTATGGAAGAATATGGT AAAATATTAATTATTGCAAT
Product: ATP-dependent Clp protease adaptor protein ClpS
Products: NA
Alternate protein names: ATP-Dependent Clp Protease Adaptor Protein Clps; ATP-Dependent Clp Protease Adaptor Protein; Ribosomal Methyltransferase
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSTKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYNGKCTVKTGPIEKLKPQCTQ LLEAGLSAEIV
Sequences:
>Translated_91_residues MSTKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYNGKCTVKTGPIEKLKPQCTQ LLEAGLSAEIV >Mature_90_residues STKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYNGKCTVKTGPIEKLKPQCTQL LEAGLSAEIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10311; Mature: 10180
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHY CCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEE NGKCTVKTGPIEKLKPQCTQLLEAGLSAEIV CCEEEEECCCHHHCCHHHHHHHHCCCCCCCC >Mature Secondary Structure STKEKVREKVREKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHY CCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEE NGKCTVKTGPIEKLKPQCTQLLEAGLSAEIV CCEEEEECCCHHHCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA