Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301245

Identifier: 146301245

GI number: 146301245

Start: 4177849

End: 4178343

Strand: Direct

Name: 146301245

Synonym: Fjoh_3503

Alternate gene names: NA

Gene position: 4177849-4178343 (Clockwise)

Preceding gene: 146301244

Following gene: 146301246

Centisome position: 68.52

GC content: 32.12

Gene sequence:

>495_bases
ATGAAACAAATAGCTTTAATCTTTATTGCATTTATAACCTTTTCTTGCTCTCAGGCTCAGAAAACAAGTTTTTCTAAAGA
GGCTTTATCAGAAAAATTATTAACCCTTGACGGAGGTCAGGTTACTTTTAAAAACATTTTAAAAAAATACAAAGGAAAAA
CTTTAGTTATCGAAGTTTGGGCTTCCTGGTGCGGCGACTGTGTAAAAGCAATGCCAAAATTAAAAGAGTTACAAGCTAAC
AATCCTGATGTTTCTTATTTATTCCTTTCTGCTGATAAAACAGCCGATAAATGGAAAGCTGGAATAGAAAAACACGAATT
AAAAGGCGATCATTTTATGATGAACGACGGTATGAAAGGTGTTTTTGGAAAAGCAATTGACTTAGACTGGATTCCGAGAT
ATATTGTTATTGACAAAACCGGAAAAATAGTTTTATATCGTGCTATCGAAACTGATTTCGACAAAATCAATGAAACACTT
AAAAGCTTAAAATAA

Upstream 100 bases:

>100_bases
AACGGCTGTTTTGTTACAAAACAAACGAGTCTTCAAATTTTGTTAATCTGCATTTGGCTTTCAATTTGTTTGTTTAACTT
TGTTGAAAATCACTAATTCT

Downstream 100 bases:

>100_bases
ATTTAAAATAACAGCAATTTTAAAATTGCTGTTATTTTAATCTACTTCATTCAAACAAAAAAATTAAAAGAATAACAAAA
ACTACCAAAATGAGAAAATC

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Thioredoxin Family Protein; Thiol-Disulfide Oxidoreductase; Redoxin; ThiolDisulfide Oxidoreductase TlpA; Exported Thioredoxin; Thiol-Disulfide Isomerase And Thioredoxin

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVWASWCGDCVKAMPKLKELQAN
NPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKGVFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETL
KSLK

Sequences:

>Translated_164_residues
MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVWASWCGDCVKAMPKLKELQAN
NPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKGVFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETL
KSLK
>Mature_164_residues
MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVWASWCGDCVKAMPKLKELQAN
NPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKGVFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETL
KSLK

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18590; Mature: 18590

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVW
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHCCCEEEEHHH
ASWCGDCVKAMPKLKELQANNPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHCCHHHHCCCCEEEECCCCCC
VFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETLKSLK
HHCCCCCCCCCCCEEEEECCCCEEEEEEHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVW
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHCCCEEEEHHH
ASWCGDCVKAMPKLKELQANNPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHCCHHHHCCCCEEEECCCCCC
VFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETLKSLK
HHCCCCCCCCCCCEEEEECCCCEEEEEEHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA