| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301208
Identifier: 146301208
GI number: 146301208
Start: 4133261
End: 4134145
Strand: Reverse
Name: 146301208
Synonym: Fjoh_3466
Alternate gene names: NA
Gene position: 4134145-4133261 (Counterclockwise)
Preceding gene: 146301209
Following gene: 146301207
Centisome position: 67.81
GC content: 32.77
Gene sequence:
>885_bases ATGAACAGGATACTTACTTTCTTAGTTTTTTTGACTTTTGGCTTAACTCAGGCACAGCAGCTAAATTGTACTGTTACTGT AAATACAGAAAGACTTCCTAATGCAAATCAGCAGGTGTTTAAAACCCTGCAGACTTCTTTATCTGAGTTTGTTAATAAAA CGGACTGGACGGGAACTGTATTAAAGCAAAACGAAAGAATTAACTGTTCAATGTACATTACATTGTCGTCTTACAGCTCA GATCAATTTTCGGGAACAATACAAATACAATCCTCACGATTAATTTTTAATTCGACATATTCATCTCCGGTTTTTAATTT TAACGATAAGGATTTTAATTTTAAATACACAGAGTACGAACCTTTATTGTTTAATCCTTCTGTTTACGAATCAAATTTAG TATCTGTAATTTCATTTTACAGCTATGTAATTTTAGGAATGGATGCTGATACTTTTCAATCAGGAGCAGGAAATCAATAC TTTGAAACCGCTCAAAACATTGCAAACGTAGCGCAGCAGGGAGGTTTTAAAGGATGGACTCAAACTGATGGACTTCAGAA TCGTTATTATTTAATAAACGATATGCTTTCTCCAATGTTTGCAGATTTGCGTCAAACAAGCTTCTTGTATCATACAGGTT TAGATACCATGAGTGATGATTTAAAAGGAGCAAAAGAAAAAATAAAATCTTCTGTGGTGCTTATTGGTAAATTAAATTCA GTTAGACCAAATGCCTTTTTAACAAGAGTATTTTTTGATGCCAAATCAGATGAAATAGTTTCTATATTTTCAGGAGGGCC AAGTATTCCGGTTACAGATCTTACCGACGTTTTAAATAGAGTTTCTCCATTAAATTCAACCAAATGGTCTCAAATTAAGT TTTAA
Upstream 100 bases:
>100_bases AAGTAATTTTACATTTTTCAAAATTGTAATGTTTAAAATGTAGTCTAAAAGCAAAAAATAGGAATACTATTTATGCTATT AAAAATAATATTTTATTTGT
Downstream 100 bases:
>100_bases AAACTTAATTTTTTTTACTTTCTTCGTATCACTTTTATTTTATATTTTTTCCTCTATGATTACTTCACTGTCAATTAAAA ATTATGCGCTGATTGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNRILTFLVFLTFGLTQAQQLNCTVTVNTERLPNANQQVFKTLQTSLSEFVNKTDWTGTVLKQNERINCSMYITLSSYSS DQFSGTIQIQSSRLIFNSTYSSPVFNFNDKDFNFKYTEYEPLLFNPSVYESNLVSVISFYSYVILGMDADTFQSGAGNQY FETAQNIANVAQQGGFKGWTQTDGLQNRYYLINDMLSPMFADLRQTSFLYHTGLDTMSDDLKGAKEKIKSSVVLIGKLNS VRPNAFLTRVFFDAKSDEIVSIFSGGPSIPVTDLTDVLNRVSPLNSTKWSQIKF
Sequences:
>Translated_294_residues MNRILTFLVFLTFGLTQAQQLNCTVTVNTERLPNANQQVFKTLQTSLSEFVNKTDWTGTVLKQNERINCSMYITLSSYSS DQFSGTIQIQSSRLIFNSTYSSPVFNFNDKDFNFKYTEYEPLLFNPSVYESNLVSVISFYSYVILGMDADTFQSGAGNQY FETAQNIANVAQQGGFKGWTQTDGLQNRYYLINDMLSPMFADLRQTSFLYHTGLDTMSDDLKGAKEKIKSSVVLIGKLNS VRPNAFLTRVFFDAKSDEIVSIFSGGPSIPVTDLTDVLNRVSPLNSTKWSQIKF >Mature_294_residues MNRILTFLVFLTFGLTQAQQLNCTVTVNTERLPNANQQVFKTLQTSLSEFVNKTDWTGTVLKQNERINCSMYITLSSYSS DQFSGTIQIQSSRLIFNSTYSSPVFNFNDKDFNFKYTEYEPLLFNPSVYESNLVSVISFYSYVILGMDADTFQSGAGNQY FETAQNIANVAQQGGFKGWTQTDGLQNRYYLINDMLSPMFADLRQTSFLYHTGLDTMSDDLKGAKEKIKSSVVLIGKLNS VRPNAFLTRVFFDAKSDEIVSIFSGGPSIPVTDLTDVLNRVSPLNSTKWSQIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33202; Mature: 33202
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILTFLVFLTFGLTQAQQLNCTVTVNTERLPNANQQVFKTLQTSLSEFVNKTDWTGTV CHHHHHHHHHHHHCCCCHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE LKQNERINCSMYITLSSYSSDQFSGTIQIQSSRLIFNSTYSSPVFNFNDKDFNFKYTEYE EECCCCEEEEEEEEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEECCC PLLFNPSVYESNLVSVISFYSYVILGMDADTFQSGAGNQYFETAQNIANVAQQGGFKGWT CEEECCCHHHHHHHHHHHHHHHHEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC QTDGLQNRYYLINDMLSPMFADLRQTSFLYHTGLDTMSDDLKGAKEKIKSSVVLIGKLNS CCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCEEEEEECCC VRPNAFLTRVFFDAKSDEIVSIFSGGPSIPVTDLTDVLNRVSPLNSTKWSQIKF CCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNRILTFLVFLTFGLTQAQQLNCTVTVNTERLPNANQQVFKTLQTSLSEFVNKTDWTGTV CHHHHHHHHHHHHCCCCHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE LKQNERINCSMYITLSSYSSDQFSGTIQIQSSRLIFNSTYSSPVFNFNDKDFNFKYTEYE EECCCCEEEEEEEEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEECCC PLLFNPSVYESNLVSVISFYSYVILGMDADTFQSGAGNQYFETAQNIANVAQQGGFKGWT CEEECCCHHHHHHHHHHHHHHHHEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC QTDGLQNRYYLINDMLSPMFADLRQTSFLYHTGLDTMSDDLKGAKEKIKSSVVLIGKLNS CCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCEEEEEECCC VRPNAFLTRVFFDAKSDEIVSIFSGGPSIPVTDLTDVLNRVSPLNSTKWSQIKF CCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA