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The map label for this gene is recN [H]

Identifier: 146301207

GI number: 146301207

Start: 4131553

End: 4133205

Strand: Reverse

Name: recN [H]

Synonym: Fjoh_3465

Alternate gene names: 146301207

Gene position: 4133205-4131553 (Counterclockwise)

Preceding gene: 146301208

Following gene: 146301206

Centisome position: 67.79

GC content: 33.27

Gene sequence:

>1653_bases
ATGATTACTTCACTGTCAATTAAAAATTATGCGCTGATTGAAAAACTTTCTATCGATTTTTCAAAAGGATTTTCTATAAT
TACAGGTGAAACAGGAGCGGGGAAATCTATTATTTTAGGTGCAATCGGGCTTGTTTTAGGAAAAAGAGCCGACCTGACTT
CATTAAAAAATAAAGAAGAAAAATGTGTTATCGAAGCGCAGTTTGAAATTTCAAAATACAATTTAAAAGAGTTTTTTGAA
GCAAATGACCTCGATTATGAAGACGAAACCATAATCAGACGTGAAATTCTGCCTTCAGGAAAATCTCGTGCCTTTATAAA
CGACAGCCCTGTTAATCTTCAGGAGCTGCAGGATTTAAGCTTGTTTTTAATCGATATTCATTCGCAGCAGCAAACACAGG
AATTATCAGACGAAACAGTTCAGTTTAAGATAATTGATGCTATTGCAAATAATAACGATATCATCTTGTCTTATCAGGAT
TTATTAAAAAGCTATAAATCAGAAAAATCAAAACTGAATGCTTTGTTGAAAAAACAAAGTGATTCTGGGAAAGAGCAGGA
GTACAATACATTTTTATTAAATGAATTGGTTTCGGCTAAATTAAAATCTGGAGAACAGGCAGAATTAGAAGCTGATTTTG
AAAAACTAAATAATGTCGAAATCATTAAAGAATCAATTGATAAATCGCTTGTAATTGCAAACGAAGAGCAGTTTGGAGTA
TTTCATAATCTAAATGAAATTAAGACGGCTTTGCAAAAGATTGCACCATTTTCTACTGAATATCAAAGTTTATTTGATAG
AATAACCAGCATATCAATCGAATTTGATGATGTTTCAAAAGAACTGCAAAATGCTTCAGAAAAATTGCTAAACGATCCGG
AGCAATTACAATTAGTAAGTCAAAAACTGCAGTTGATTTTCAATTTACAGAAAAAACACCACGCTGGATCTGTAGAAGAA
CTGCTTCAAATTCAGGCAGATTTAGGAAACACGCTTCTTGAATTAGATAATATCGAGGAAGAAATCGAAACATTATCAAA
AGCAATTGAAGAAAAAGCGGGTGAATTAGATGCTTTTGCTGCTAAAATTCATCAAAATAGAATAAATGCCATTCCGGTTT
TATCAAATCAGTTAATTTCGATTTTAGAAACCTTAGGAATGCCAAACGTTCGTTTTAATATCGAACTTATACCATCTGAA
ACCTATTTCCAAAATGGAAAAGATGAATTACAATTCTTGTTTTCGGCTAATAAAGGAACTGATTTTGGTCTGCTGAAAAA
AGTAGCATCAGGAGGAGAGATGTCTCGTATTATGCTGGCTGTAAAAGCGATTTTAGCTCAATATTCAAAACTGCCTACTT
TAATTTTTGATGAAATTGATACAGGAGTTTCTGGAGAAATTGCCATTAGAATGGGAGAGATCATGAAAGAGATGAGTGCT
AAAATGCAGATTTTTGCCATCACACACTTACCGCAAATTGCAGCAAAAGGCGATTCGCATTTCAAAGTTTCAAAAGCAAC
AATAGATGATGATACACAGTCAGAATTGAAGCTGTTGTCTCAGAATGAAAGAGTTATAGAAATTGCTCAAATGTTATCCG
GAGCAGTCGTTTCTGATTCGGCTTTAAATCACGCTAAAGCCTTGTTGAACTAA

Upstream 100 bases:

>100_bases
GTTTCTCCATTAAATTCAACCAAATGGTCTCAAATTAAGTTTTAAAAACTTAATTTTTTTTACTTTCTTCGTATCACTTT
TATTTTATATTTTTTCCTCT

Downstream 100 bases:

>100_bases
AGAAATACTTTATATTTGTCATCGAAAAATAAGTAAACAAACGGTAATAAGCCCTCATTTATCTAATAAATAGCTTATTA
ACGAATAAATAAAACAAGTA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MITSLSIKNYALIEKLSIDFSKGFSIITGETGAGKSIILGAIGLVLGKRADLTSLKNKEEKCVIEAQFEISKYNLKEFFE
ANDLDYEDETIIRREILPSGKSRAFINDSPVNLQELQDLSLFLIDIHSQQQTQELSDETVQFKIIDAIANNNDIILSYQD
LLKSYKSEKSKLNALLKKQSDSGKEQEYNTFLLNELVSAKLKSGEQAELEADFEKLNNVEIIKESIDKSLVIANEEQFGV
FHNLNEIKTALQKIAPFSTEYQSLFDRITSISIEFDDVSKELQNASEKLLNDPEQLQLVSQKLQLIFNLQKKHHAGSVEE
LLQIQADLGNTLLELDNIEEEIETLSKAIEEKAGELDAFAAKIHQNRINAIPVLSNQLISILETLGMPNVRFNIELIPSE
TYFQNGKDELQFLFSANKGTDFGLLKKVASGGEMSRIMLAVKAILAQYSKLPTLIFDEIDTGVSGEIAIRMGEIMKEMSA
KMQIFAITHLPQIAAKGDSHFKVSKATIDDDTQSELKLLSQNERVIEIAQMLSGAVVSDSALNHAKALLN

Sequences:

>Translated_550_residues
MITSLSIKNYALIEKLSIDFSKGFSIITGETGAGKSIILGAIGLVLGKRADLTSLKNKEEKCVIEAQFEISKYNLKEFFE
ANDLDYEDETIIRREILPSGKSRAFINDSPVNLQELQDLSLFLIDIHSQQQTQELSDETVQFKIIDAIANNNDIILSYQD
LLKSYKSEKSKLNALLKKQSDSGKEQEYNTFLLNELVSAKLKSGEQAELEADFEKLNNVEIIKESIDKSLVIANEEQFGV
FHNLNEIKTALQKIAPFSTEYQSLFDRITSISIEFDDVSKELQNASEKLLNDPEQLQLVSQKLQLIFNLQKKHHAGSVEE
LLQIQADLGNTLLELDNIEEEIETLSKAIEEKAGELDAFAAKIHQNRINAIPVLSNQLISILETLGMPNVRFNIELIPSE
TYFQNGKDELQFLFSANKGTDFGLLKKVASGGEMSRIMLAVKAILAQYSKLPTLIFDEIDTGVSGEIAIRMGEIMKEMSA
KMQIFAITHLPQIAAKGDSHFKVSKATIDDDTQSELKLLSQNERVIEIAQMLSGAVVSDSALNHAKALLN
>Mature_550_residues
MITSLSIKNYALIEKLSIDFSKGFSIITGETGAGKSIILGAIGLVLGKRADLTSLKNKEEKCVIEAQFEISKYNLKEFFE
ANDLDYEDETIIRREILPSGKSRAFINDSPVNLQELQDLSLFLIDIHSQQQTQELSDETVQFKIIDAIANNNDIILSYQD
LLKSYKSEKSKLNALLKKQSDSGKEQEYNTFLLNELVSAKLKSGEQAELEADFEKLNNVEIIKESIDKSLVIANEEQFGV
FHNLNEIKTALQKIAPFSTEYQSLFDRITSISIEFDDVSKELQNASEKLLNDPEQLQLVSQKLQLIFNLQKKHHAGSVEE
LLQIQADLGNTLLELDNIEEEIETLSKAIEEKAGELDAFAAKIHQNRINAIPVLSNQLISILETLGMPNVRFNIELIPSE
TYFQNGKDELQFLFSANKGTDFGLLKKVASGGEMSRIMLAVKAILAQYSKLPTLIFDEIDTGVSGEIAIRMGEIMKEMSA
KMQIFAITHLPQIAAKGDSHFKVSKATIDDDTQSELKLLSQNERVIEIAQMLSGAVVSDSALNHAKALLN

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=30.2702702702703, Blast_Score=262, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61399; Mature: 61399

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITSLSIKNYALIEKLSIDFSKGFSIITGETGAGKSIILGAIGLVLGKRADLTSLKNKEE
CCCCCCCCCHHHHHHHHCCHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCC
KCVIEAQFEISKYNLKEFFEANDLDYEDETIIRREILPSGKSRAFINDSPVNLQELQDLS
CEEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHCCE
LFLIDIHSQQQTQELSDETVQFKIIDAIANNNDIILSYQDLLKSYKSEKSKLNALLKKQS
EEEEEECCHHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC
DSGKEQEYNTFLLNELVSAKLKSGEQAELEADFEKLNNVEIIKESIDKSLVIANEEQFGV
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEEECCHHHHH
FHNLNEIKTALQKIAPFSTEYQSLFDRITSISIEFDDVSKELQNASEKLLNDPEQLQLVS
HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCHHHHHHHH
QKLQLIFNLQKKHHAGSVEELLQIQADLGNTLLELDNIEEEIETLSKAIEEKAGELDAFA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AKIHQNRINAIPVLSNQLISILETLGMPNVRFNIELIPSETYFQNGKDELQFLFSANKGT
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCHHHHHEEEECCCCC
DFGLLKKVASGGEMSRIMLAVKAILAQYSKLPTLIFDEIDTGVSGEIAIRMGEIMKEMSA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEHHHHHHHHHHHH
KMQIFAITHLPQIAAKGDSHFKVSKATIDDDTQSELKLLSQNERVIEIAQMLSGAVVSDS
CEEEEEEECCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHCHH
ALNHAKALLN
HHHHHHHHCC
>Mature Secondary Structure
MITSLSIKNYALIEKLSIDFSKGFSIITGETGAGKSIILGAIGLVLGKRADLTSLKNKEE
CCCCCCCCCHHHHHHHHCCHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCC
KCVIEAQFEISKYNLKEFFEANDLDYEDETIIRREILPSGKSRAFINDSPVNLQELQDLS
CEEEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHCCE
LFLIDIHSQQQTQELSDETVQFKIIDAIANNNDIILSYQDLLKSYKSEKSKLNALLKKQS
EEEEEECCHHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC
DSGKEQEYNTFLLNELVSAKLKSGEQAELEADFEKLNNVEIIKESIDKSLVIANEEQFGV
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEEECCHHHHH
FHNLNEIKTALQKIAPFSTEYQSLFDRITSISIEFDDVSKELQNASEKLLNDPEQLQLVS
HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCHHHHHHHH
QKLQLIFNLQKKHHAGSVEELLQIQADLGNTLLELDNIEEEIETLSKAIEEKAGELDAFA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AKIHQNRINAIPVLSNQLISILETLGMPNVRFNIELIPSETYFQNGKDELQFLFSANKGT
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCHHHHHEEEECCCCC
DFGLLKKVASGGEMSRIMLAVKAILAQYSKLPTLIFDEIDTGVSGEIAIRMGEIMKEMSA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEHHHHHHHHHHHH
KMQIFAITHLPQIAAKGDSHFKVSKATIDDDTQSELKLLSQNERVIEIAQMLSGAVVSDS
CEEEEEEECCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHCHH
ALNHAKALLN
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA