| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301199
Identifier: 146301199
GI number: 146301199
Start: 4122761
End: 4123384
Strand: Reverse
Name: 146301199
Synonym: Fjoh_3457
Alternate gene names: NA
Gene position: 4123384-4122761 (Counterclockwise)
Preceding gene: 146301200
Following gene: 146301198
Centisome position: 67.63
GC content: 29.49
Gene sequence:
>624_bases ATGGAAAGATTTCAAGATGAAAATAAATGGTTAGGAAGTTTTGCAAATGAAATTTTTGTAAAATGTCCAAAATGTGATTC TAAATCGATAATAAGGTTGGGAAATACAGAAGAATATCAAAAAGAGTATTATAAGGGGTATATCTATATTCCAATTTTTG AATGTAAATCTTGTTTTTTTAAAGTTGATGAGCCTGTATATCAATATATCGCATATGGAAGCCCATACTGCAATAACTGT TTTGAACAATATGAATTTGAATCACCAGTTTTAAAAGAAGAACCTGAAATGTATAAGGCAAAATGTCCACATTGTAGATT TCAGGAAGAGTGGGAGCCTAAAATTAAATATATTCTCAAAAATCAAATAATTAATGATGGATTAAGAAGAGATCAATGGT ATAATTTACCAATTTGGTTTCAAAAAGAAGTAAATGGAAATCTTTTTTGGGCTTATAATCTCGATCATATCGATTATCTC GAAAGATACATAAAAGCAGATTTACGAGAAAGAAACAATGATGGGAGTGGTAATGGAACTATGGTTTCGAGACTCCCACA ATTTGTAAAAGCAGCCAAAAACAGAGAAAAGCTGCTCAAAATTTTAAAGAAATGGAAAGAATAA
Upstream 100 bases:
>100_bases AGACATCGAGAAAGTAATGGCGAATCAAACGGATTTAGTTGAAGTTTTGGGAACATTTACACCGAAGATTGTTAGAATGG ACCGCTAAAAATTAAAAATT
Downstream 100 bases:
>100_bases TTCAGATAACAGCGGGTCGCGGACCTGCAGAATGCACTTGGGTTGTCGCTCAAGTGCTTAAAAAAGTTTTGGAAGAAGCA CAAGATCAGAATTTAGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MERFQDENKWLGSFANEIFVKCPKCDSKSIIRLGNTEEYQKEYYKGYIYIPIFECKSCFFKVDEPVYQYIAYGSPYCNNC FEQYEFESPVLKEEPEMYKAKCPHCRFQEEWEPKIKYILKNQIINDGLRRDQWYNLPIWFQKEVNGNLFWAYNLDHIDYL ERYIKADLRERNNDGSGNGTMVSRLPQFVKAAKNREKLLKILKKWKE
Sequences:
>Translated_207_residues MERFQDENKWLGSFANEIFVKCPKCDSKSIIRLGNTEEYQKEYYKGYIYIPIFECKSCFFKVDEPVYQYIAYGSPYCNNC FEQYEFESPVLKEEPEMYKAKCPHCRFQEEWEPKIKYILKNQIINDGLRRDQWYNLPIWFQKEVNGNLFWAYNLDHIDYL ERYIKADLRERNNDGSGNGTMVSRLPQFVKAAKNREKLLKILKKWKE >Mature_207_residues MERFQDENKWLGSFANEIFVKCPKCDSKSIIRLGNTEEYQKEYYKGYIYIPIFECKSCFFKVDEPVYQYIAYGSPYCNNC FEQYEFESPVLKEEPEMYKAKCPHCRFQEEWEPKIKYILKNQIINDGLRRDQWYNLPIWFQKEVNGNLFWAYNLDHIDYL ERYIKADLRERNNDGSGNGTMVSRLPQFVKAAKNREKLLKILKKWKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25113; Mature: 25113
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFQDENKWLGSFANEIFVKCPKCDSKSIIRLGNTEEYQKEYYKGYIYIPIFECKSCFF CCCCCHHHHHHHHHHHHHEEECCCCCCCCEEECCCCHHHHHHHHCCEEEEEHHHHHHHHH KVDEPVYQYIAYGSPYCNNCFEQYEFESPVLKEEPEMYKAKCPHCRFQEEWEPKIKYILK HCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHH NQIINDGLRRDQWYNLPIWFQKEVNGNLFWAYNLDHIDYLERYIKADLRERNNDGSGNGT HHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCH MVSRLPQFVKAAKNREKLLKILKKWKE HHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MERFQDENKWLGSFANEIFVKCPKCDSKSIIRLGNTEEYQKEYYKGYIYIPIFECKSCFF CCCCCHHHHHHHHHHHHHEEECCCCCCCCEEECCCCHHHHHHHHCCEEEEEHHHHHHHHH KVDEPVYQYIAYGSPYCNNCFEQYEFESPVLKEEPEMYKAKCPHCRFQEEWEPKIKYILK HCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHH NQIINDGLRRDQWYNLPIWFQKEVNGNLFWAYNLDHIDYLERYIKADLRERNNDGSGNGT HHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCH MVSRLPQFVKAAKNREKLLKILKKWKE HHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA