Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is argE [H]

Identifier: 146301170

GI number: 146301170

Start: 4095178

End: 4096248

Strand: Reverse

Name: argE [H]

Synonym: Fjoh_3428

Alternate gene names: 146301170

Gene position: 4096248-4095178 (Counterclockwise)

Preceding gene: 146301171

Following gene: 146301169

Centisome position: 67.19

GC content: 35.95

Gene sequence:

>1071_bases
ATGAAAAACATAGATACGCTTACTCAGGAAGCAATTAGTTTATTAAGAAGCTTAATCGAAACCCCTTCGTTTTCAAGTGA
AGAAGATCAGACGGCTCTTTTAATCGAAAATTGGTTCAATCAAAATGAAATTCCATTCAAGAGAGAAAACAACAATGTGT
GGGCTTTCAACAAATATTTCGACGAAAACAAACCAACACTTTTATTAAACTCACATCACGATACTGTACGACCAAATCAG
GCATACACCAACGATCCGTTTAAAGCAATCGAAAAAGACGGAAAATTATTCGGATTAGGAAGTAATGATGCAGGCGGATG
CCTGGTTTCGTTATTAGCAACATTTGTACATTTTTACGAAAATCAAAACCTATCCCATAATATTGTAATTGTGGCTTCTG
CCGAAGAAGAAAGCAGTGGAAAAAACGGTTTAAACAGCGTTTTAAAAAGCTTACCAGAATTAGATTGCGCGATTGTAGGA
GAACCAACGTTAATGCAATTAGCAGTTGCAGAAAAAGGTCTTTTAGTTTTGGATGTAAAAGTAAAAGGAACTGCGAGCCA
CGCTGCGCATCAAAACGACGATAATGCATTATATAAATCAATTCCGGTAATGGAATGGTTTAAAAACTATAAATTCGACA
AAATCTCAGATGTTTTAGGTCCTGTAAAAATGACCGTAACGCAAATTAATGCAGGAAAACAGCATAATGTTGTACCGTCA
GAATGTGATTTGGTAGTGGATATTCGTGTAACAGACCGATATACCAATGCTGAAATTCTAGAAGTAGTAAAAGCAAATGT
AAATGCCGAAGTAACGCCAAGATCAATGCATTTAAATGCATCGTCTATTCCAATTGAGCACGGTTTGGTTCAGGCTGGAA
TCGCATTAGGAAGAACAACGTATGGTTCGCCAACACTTTCTGACCAATCCGTTTTAAGCTGTCAGTCTTTAAAATTAGGA
CCAGGAGAAACATTGCGTTCGCATTCAGCTGACGAATTTATTTTTGTAAATGAAATTGTAGAAGGAGTCGACTTGTATAT
TAAAATACTAACTGATTTCTTTAAATTATAA

Upstream 100 bases:

>100_bases
GCACGAGGTATTTTAAATAAATTTGCGCAAGTAAAAATGGTCAAAGGAAAGCTCAAAAACTTTGTTGCTTTGCCCCTTTG
AGCCTTTGAACCTTATTAAA

Downstream 100 bases:

>100_bases
TTAAACCCGACAGGTTTTTAAAACCTGTCGGGTTTCTAAAAAATAGTACCTATGAAACTTTGGGAAAAAGGAATACCAAC
AGATAAACAAATCGAGCAAT

Product: peptidase M20

Products: NA

Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYFDENKPTLLLNSHHDTVRPNQ
AYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYENQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVG
EPTLMQLAVAEKGLLVLDVKVKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS
ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTTYGSPTLSDQSVLSCQSLKLG
PGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL

Sequences:

>Translated_356_residues
MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYFDENKPTLLLNSHHDTVRPNQ
AYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYENQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVG
EPTLMQLAVAEKGLLVLDVKVKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS
ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTTYGSPTLSDQSVLSCQSLKLG
PGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL
>Mature_356_residues
MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYFDENKPTLLLNSHHDTVRPNQ
AYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYENQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVG
EPTLMQLAVAEKGLLVLDVKVKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS
ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTTYGSPTLSDQSVLSCQSLKLG
PGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL

Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790395, Length=380, Percent_Identity=26.0526315789474, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1788816, Length=277, Percent_Identity=27.0758122743682, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010169
- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.16 [H]

Molecular weight: Translated: 39364; Mature: 39364

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYF
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCCCEEECCCCEEEEEEEC
DENKPTLLLNSHHDTVRPNQAYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYE
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHC
NQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVGEPTLMQLAVAEKGLLVLDVK
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEE
VKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS
ECCCHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCC
ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTT
CCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHCCCC
YGSPTLSDQSVLSCQSLKLGPGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL
CCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYF
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCCCEEECCCCEEEEEEEC
DENKPTLLLNSHHDTVRPNQAYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYE
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHC
NQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVGEPTLMQLAVAEKGLLVLDVK
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEE
VKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS
ECCCHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCC
ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTT
CCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHCCCC
YGSPTLSDQSVLSCQSLKLGPGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL
CCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA