| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301140
Identifier: 146301140
GI number: 146301140
Start: 4061566
End: 4062288
Strand: Reverse
Name: 146301140
Synonym: Fjoh_3398
Alternate gene names: NA
Gene position: 4062288-4061566 (Counterclockwise)
Preceding gene: 146301141
Following gene: 146301139
Centisome position: 66.63
GC content: 33.75
Gene sequence:
>723_bases ATGAAAAATTTCCTAATACCTACTACTTTAAAAGATGATACAATTTCTGCTGTAAAATCAGCAATTAGTCAGGCAAAAGA ATCAGGCTGTGAAATTGTTCTAATGATGGTTTCTGAAACTCCGGATGCCTTTTCATCATCTAATTTTTTAAGAGAAATGA GAACCGGACTTACCAAAAGTCAGGAAGAAGTTCTGGAAACCTGCAGATATATGATTGATCATACTAAAAACTGCAAAATA AAAATCCATAATCAATACGGACTTTCGTCTCCCATTTTTAGAGGAATCATCGAGCATTTTGCTGTAAAATTGGTTATTCT GACCCATTCTTATAAACAGGAAACAAAGCGCATTCACCAATATTTAGTGCAATTAGCCGCAAATCAAAAATGCCCGATTC TGCATTTAGGAAACGAACAGTTCAAACAAGACTTCACAAAAGCACTTTATATCGAAAACAGCAGTGCTAATATTCATGTA AAAGATGTTCAGCAGTATTTAAATCAAAATTTCTCGTATGAAATTGTAAGCCAGACTTCCAAAATCGATGATAATTACGA AGAAGTTGCGCCTTATTTAACTGAAGCCATTTCGAAATACGAAATAGATTTACTGGTAGAAACCCGTAAAGGAGAAAAAA TCAAATTTAAAAAAGTAAAAAAACACGACATTAATGAAAAACTGGGACTTCCCGTGCTTTCATTATATGAGGAGCTGGCT TAG
Upstream 100 bases:
>100_bases AAAATTCTAATGTTGAATCTTAGAAAAATCTAATTTAAGATTAAGACCCTTCTAATTTTCAGGCAGTTATTTTGTATGTA TAAACTAAAAGATTATACAT
Downstream 100 bases:
>100_bases TTTTTTTCATAATCATTTAATTGTATTAATATAAATCTAACGTGCCGCTAGGCACCCCAATATTGGTAGAAAAATAATTG ATAATAAATTCAAAACGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKNFLIPTTLKDDTISAVKSAISQAKESGCEIVLMMVSETPDAFSSSNFLREMRTGLTKSQEEVLETCRYMIDHTKNCKI KIHNQYGLSSPIFRGIIEHFAVKLVILTHSYKQETKRIHQYLVQLAANQKCPILHLGNEQFKQDFTKALYIENSSANIHV KDVQQYLNQNFSYEIVSQTSKIDDNYEEVAPYLTEAISKYEIDLLVETRKGEKIKFKKVKKHDINEKLGLPVLSLYEELA
Sequences:
>Translated_240_residues MKNFLIPTTLKDDTISAVKSAISQAKESGCEIVLMMVSETPDAFSSSNFLREMRTGLTKSQEEVLETCRYMIDHTKNCKI KIHNQYGLSSPIFRGIIEHFAVKLVILTHSYKQETKRIHQYLVQLAANQKCPILHLGNEQFKQDFTKALYIENSSANIHV KDVQQYLNQNFSYEIVSQTSKIDDNYEEVAPYLTEAISKYEIDLLVETRKGEKIKFKKVKKHDINEKLGLPVLSLYEELA >Mature_240_residues MKNFLIPTTLKDDTISAVKSAISQAKESGCEIVLMMVSETPDAFSSSNFLREMRTGLTKSQEEVLETCRYMIDHTKNCKI KIHNQYGLSSPIFRGIIEHFAVKLVILTHSYKQETKRIHQYLVQLAANQKCPILHLGNEQFKQDFTKALYIENSSANIHV KDVQQYLNQNFSYEIVSQTSKIDDNYEEVAPYLTEAISKYEIDLLVETRKGEKIKFKKVKKHDINEKLGLPVLSLYEELA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27614; Mature: 27614
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFLIPTTLKDDTISAVKSAISQAKESGCEIVLMMVSETPDAFSSSNFLREMRTGLTKS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCC QEEVLETCRYMIDHTKNCKIKIHNQYGLSSPIFRGIIEHFAVKLVILTHSYKQETKRIHQ HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLVQLAANQKCPILHLGNEQFKQDFTKALYIENSSANIHVKDVQQYLNQNFSYEIVSQTS HHHHHHCCCCCCEEECCCHHHHHHHHHHEEEECCCCEEEHHHHHHHHCCCCCEEEHHHHH KIDDNYEEVAPYLTEAISKYEIDLLVETRKGEKIKFKKVKKHDINEKLGLPVLSLYEELA HCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEHHHHHHHHCCCHHHCCHHHHHHHHHC >Mature Secondary Structure MKNFLIPTTLKDDTISAVKSAISQAKESGCEIVLMMVSETPDAFSSSNFLREMRTGLTKS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCC QEEVLETCRYMIDHTKNCKIKIHNQYGLSSPIFRGIIEHFAVKLVILTHSYKQETKRIHQ HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLVQLAANQKCPILHLGNEQFKQDFTKALYIENSSANIHVKDVQQYLNQNFSYEIVSQTS HHHHHHCCCCCCEEECCCHHHHHHHHHHEEEECCCCEEEHHHHHHHHCCCCCEEEHHHHH KIDDNYEEVAPYLTEAISKYEIDLLVETRKGEKIKFKKVKKHDINEKLGLPVLSLYEELA HCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEHHHHHHHHCCCHHHCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA