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The map label for this gene is yneE [C]

Identifier: 146301139

GI number: 146301139

Start: 4060382

End: 4061329

Strand: Reverse

Name: yneE [C]

Synonym: Fjoh_3397

Alternate gene names: 146301139

Gene position: 4061329-4060382 (Counterclockwise)

Preceding gene: 146301140

Following gene: 146301137

Centisome position: 66.61

GC content: 36.5

Gene sequence:

>948_bases
ATGTTATTAAGAAAAAGAATACCAATGAAGTACGTTCTCGGGAAAATTAAAGTAGAAATTGCTCTGGTACTGGCTTATAC
CGTACTATTTGAAATATTTCACCATTATTTTGTTACACTTCCCGTAGATATTCCAATTGCGATTCCAACCATGATTGGAA
CCATTATATCTCTATTATTAGCTTTTAAATCCAATCAGGCGTATGACCGCTGGTGGGAAGCCCGAATTGTGTGGGGAGCC
GTTGTAAACGATTCGAGAACCTTAATCCGTCAGGTGCTGACGTTTTATAAAGACCCTGATTTTTCTGTTGAAGCAAGCGA
ATTCAAAGAAAACTTTGCTAAAAGACAAATCGCCTGGTGTTATAGTTTAGGAGAATCGCTTCGAAACCGAGACGCTATAA
AACCGTTAAAAGGTTTAATGAGCGATGAAGAAATAAAATACATCAAGAACCATCAAAACGTTCCAAATGCTATTTTAATG
CTTCATGCGCGCGATCTTAGAAATGCTAAAATCGAGAAGAAAATCAATATGTACCAGCAGGTTGAAATTGATAATACGCT
ATCGAGATTATGTGACGAAATGGGAAAATGCGAGAGAATTAAAAACACCATTTTTCCAACCACATACAGCATGTACATTA
GGCTGACCTTGTGTTTGTTTATTTTATTACTGCCGTTTGGACTGACTAGTGTATTAAGCTGGTTTGCAATTCCGTTAATT
ACAGCAATTGGTGCGGCTTTCTTTTTGATCGAAAGAATGGCAATTCATTTACAGGATCCGTTCGAGAACAGACCAACAGA
TACGCCTGTAACGGCAATTGCCAATACAATTGAAAAAAATATCAAGCAAATGCTGAATGAATATCAAAGTGAATTTGATA
TCCTGAAAGAATTTGATCTAAACGACGAACCTAAGAAAGTCGAAAAAGACGCTTATTTCGTTTTATAA

Upstream 100 bases:

>100_bases
CGGCACGCCAATGAAATTTGAACTCATTTATTGTCTACCAACGTTATGTGCCTAACGGCACATGCAAACCGTAATATTAA
TTTAATTTAAAACCGAAAAT

Downstream 100 bases:

>100_bases
CTTTTTAATTTTGGTCTCTTTAATTAATTGTTGGCCGGATGGTGAGTAGTTGCACTGTCCGGTTTTTTTATAAAACGTAT
TTTCTAAATACTTTTTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLLRKRIPMKYVLGKIKVEIALVLAYTVLFEIFHHYFVTLPVDIPIAIPTMIGTIISLLLAFKSNQAYDRWWEARIVWGA
VVNDSRTLIRQVLTFYKDPDFSVEASEFKENFAKRQIAWCYSLGESLRNRDAIKPLKGLMSDEEIKYIKNHQNVPNAILM
LHARDLRNAKIEKKINMYQQVEIDNTLSRLCDEMGKCERIKNTIFPTTYSMYIRLTLCLFILLLPFGLTSVLSWFAIPLI
TAIGAAFFLIERMAIHLQDPFENRPTDTPVTAIANTIEKNIKQMLNEYQSEFDILKEFDLNDEPKKVEKDAYFVL

Sequences:

>Translated_315_residues
MLLRKRIPMKYVLGKIKVEIALVLAYTVLFEIFHHYFVTLPVDIPIAIPTMIGTIISLLLAFKSNQAYDRWWEARIVWGA
VVNDSRTLIRQVLTFYKDPDFSVEASEFKENFAKRQIAWCYSLGESLRNRDAIKPLKGLMSDEEIKYIKNHQNVPNAILM
LHARDLRNAKIEKKINMYQQVEIDNTLSRLCDEMGKCERIKNTIFPTTYSMYIRLTLCLFILLLPFGLTSVLSWFAIPLI
TAIGAAFFLIERMAIHLQDPFENRPTDTPVTAIANTIEKNIKQMLNEYQSEFDILKEFDLNDEPKKVEKDAYFVL
>Mature_315_residues
MLLRKRIPMKYVLGKIKVEIALVLAYTVLFEIFHHYFVTLPVDIPIAIPTMIGTIISLLLAFKSNQAYDRWWEARIVWGA
VVNDSRTLIRQVLTFYKDPDFSVEASEFKENFAKRQIAWCYSLGESLRNRDAIKPLKGLMSDEEIKYIKNHQNVPNAILM
LHARDLRNAKIEKKINMYQQVEIDNTLSRLCDEMGKCERIKNTIFPTTYSMYIRLTLCLFILLLPFGLTSVLSWFAIPLI
TAIGAAFFLIERMAIHLQDPFENRPTDTPVTAIANTIEKNIKQMLNEYQSEFDILKEFDLNDEPKKVEKDAYFVL

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=286, Percent_Identity=26.5734265734266, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 36670; Mature: 36670

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRKRIPMKYVLGKIKVEIALVLAYTVLFEIFHHYFVTLPVDIPIAIPTMIGTIISLLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AFKSNQAYDRWWEARIVWGAVVNDSRTLIRQVLTFYKDPDFSVEASEFKENFAKRQIAWC
HHHCCCHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
YSLGESLRNRDAIKPLKGLMSDEEIKYIKNHQNVPNAILMLHARDLRNAKIEKKINMYQQ
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHH
VEIDNTLSRLCDEMGKCERIKNTIFPTTYSMYIRLTLCLFILLLPFGLTSVLSWFAIPLI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIGAAFFLIERMAIHLQDPFENRPTDTPVTAIANTIEKNIKQMLNEYQSEFDILKEFDL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDEPKKVEKDAYFVL
CCCCHHHCCCCCCCC
>Mature Secondary Structure
MLLRKRIPMKYVLGKIKVEIALVLAYTVLFEIFHHYFVTLPVDIPIAIPTMIGTIISLLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AFKSNQAYDRWWEARIVWGAVVNDSRTLIRQVLTFYKDPDFSVEASEFKENFAKRQIAWC
HHHCCCHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
YSLGESLRNRDAIKPLKGLMSDEEIKYIKNHQNVPNAILMLHARDLRNAKIEKKINMYQQ
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHH
VEIDNTLSRLCDEMGKCERIKNTIFPTTYSMYIRLTLCLFILLLPFGLTSVLSWFAIPLI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIGAAFFLIERMAIHLQDPFENRPTDTPVTAIANTIEKNIKQMLNEYQSEFDILKEFDL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDEPKKVEKDAYFVL
CCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]