Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301135

Identifier: 146301135

GI number: 146301135

Start: 4054463

End: 4055209

Strand: Direct

Name: 146301135

Synonym: Fjoh_3393

Alternate gene names: NA

Gene position: 4054463-4055209 (Clockwise)

Preceding gene: 146301133

Following gene: 146301138

Centisome position: 66.5

GC content: 35.07

Gene sequence:

>747_bases
ATGGAACTAAAGAAATTACTTGAACAACAGTCTGCCGAAGCTTGGGAAAAATATATTCCGTCACTTTCTATTGACTGTGT
TATTTTTAGTTTTTACGAAAATGCACTTCATGTTCTTACCGTAAATATGAAGGATCAGAATTTATGGGGACTTCCAGGCG
GTTATGTACAAAAAGATGAAAATGTAGATGATGCCGCAATGCGAATTTTAAAAGACAGAACCGGAACCGAAAATATCTAT
TTACAGCAGTTTTACACTTTTGGAAATTTAAAAAGATCTGAAAGTGCTTTTGAGGCTTATGATGACAGCATTTGGAACAA
ACAGCGTTTTGTTTCTATTGGTTATTATGCCCTTGCAGAACATTCGCAGGTAAAATTAAGAATTGACCAATACTCAAATG
CAGTCGAATGGAAATTGATTGAGACTCTGCCAGAATTTATGATGGATCACAGAGCTATTTTTGATAAAGCACTGCTTACT
CTTAGAGAACAGCTCAATAATCATCCTATTGGTTATAATTTACTGCCGGAAAAATTCACAATGCCGGAACTTCAAAAATT
GTATGAAGCTATCTTGGGCAAAAAACTGAATCGCGGTAATTTTTATCGAAAAATTCTTCGTTATGATATTCTTATTAAAC
TAGACGAATCGCGTAAAGGCGGTGCGCACAAAGCCCCGGATTTATACAGCTTTGATTTAACGAAATATAATGAAGCTCTA
AAAGAAGGTTTGAAAGGAAACTGGTAA

Upstream 100 bases:

>100_bases
CTTTAAAAATGCTGGTTTTATTGGCAAAAAATAAAGTTTTGGAGATTCGCAGTGCTTTAAAATTCTTAAATAGATTAAAT
TTGAAAACAAATAGAAATAA

Downstream 100 bases:

>100_bases
TTTTTTCAAAAATAGCCCGTGGTGAAACCACGGGCTATTTAAGATTTCTTTAGCACAGATTAAAATCTAAACTGCAATTG
GCGCTGCTAAACAGCTTTCC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: Nudix Hydrolase; NUDIX Family Hydrolase; Hydrolase NUDIX Family; DNA Hydrolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Hydrolase NUDIX Family Protein; Hydrolase; Phosphohydrolase; NUDIX Domain-Containing Protein; DNA Hydrolase With MutT Domain-Containing Protein; MutT/NUDIX Family DNA Hydrolase; Nudix Hydrolase Family Protein; MutT/Nudix Family DNA Hydrolase; NTP Pyrophosphohydrolase; Hydrolase MutT/Nudix Family Protein; Hydrolase Nudix Family; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDENVDDAAMRILKDRTGTENIY
LQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAEHSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLT
LREQLNNHPIGYNLLPEKFTMPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL
KEGLKGNW

Sequences:

>Translated_248_residues
MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDENVDDAAMRILKDRTGTENIY
LQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAEHSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLT
LREQLNNHPIGYNLLPEKFTMPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL
KEGLKGNW
>Mature_248_residues
MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDENVDDAAMRILKDRTGTENIY
LQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAEHSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLT
LREQLNNHPIGYNLLPEKFTMPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL
KEGLKGNW

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29084; Mature: 29084

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDE
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC
NVDDAAMRILKDRTGTENIYLQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAE
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEHHHHHCC
HSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLTLREQLNNHPIGYNLLPEKFT
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
MPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEECHHHHHHHHH
KEGLKGNW
HHHCCCCC
>Mature Secondary Structure
MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDE
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC
NVDDAAMRILKDRTGTENIYLQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAE
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEHHHHHCC
HSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLTLREQLNNHPIGYNLLPEKFT
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
MPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEECHHHHHHHHH
KEGLKGNW
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA