| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301135
Identifier: 146301135
GI number: 146301135
Start: 4054463
End: 4055209
Strand: Direct
Name: 146301135
Synonym: Fjoh_3393
Alternate gene names: NA
Gene position: 4054463-4055209 (Clockwise)
Preceding gene: 146301133
Following gene: 146301138
Centisome position: 66.5
GC content: 35.07
Gene sequence:
>747_bases ATGGAACTAAAGAAATTACTTGAACAACAGTCTGCCGAAGCTTGGGAAAAATATATTCCGTCACTTTCTATTGACTGTGT TATTTTTAGTTTTTACGAAAATGCACTTCATGTTCTTACCGTAAATATGAAGGATCAGAATTTATGGGGACTTCCAGGCG GTTATGTACAAAAAGATGAAAATGTAGATGATGCCGCAATGCGAATTTTAAAAGACAGAACCGGAACCGAAAATATCTAT TTACAGCAGTTTTACACTTTTGGAAATTTAAAAAGATCTGAAAGTGCTTTTGAGGCTTATGATGACAGCATTTGGAACAA ACAGCGTTTTGTTTCTATTGGTTATTATGCCCTTGCAGAACATTCGCAGGTAAAATTAAGAATTGACCAATACTCAAATG CAGTCGAATGGAAATTGATTGAGACTCTGCCAGAATTTATGATGGATCACAGAGCTATTTTTGATAAAGCACTGCTTACT CTTAGAGAACAGCTCAATAATCATCCTATTGGTTATAATTTACTGCCGGAAAAATTCACAATGCCGGAACTTCAAAAATT GTATGAAGCTATCTTGGGCAAAAAACTGAATCGCGGTAATTTTTATCGAAAAATTCTTCGTTATGATATTCTTATTAAAC TAGACGAATCGCGTAAAGGCGGTGCGCACAAAGCCCCGGATTTATACAGCTTTGATTTAACGAAATATAATGAAGCTCTA AAAGAAGGTTTGAAAGGAAACTGGTAA
Upstream 100 bases:
>100_bases CTTTAAAAATGCTGGTTTTATTGGCAAAAAATAAAGTTTTGGAGATTCGCAGTGCTTTAAAATTCTTAAATAGATTAAAT TTGAAAACAAATAGAAATAA
Downstream 100 bases:
>100_bases TTTTTTCAAAAATAGCCCGTGGTGAAACCACGGGCTATTTAAGATTTCTTTAGCACAGATTAAAATCTAAACTGCAATTG GCGCTGCTAAACAGCTTTCC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; NUDIX Family Hydrolase; Hydrolase NUDIX Family; DNA Hydrolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Hydrolase NUDIX Family Protein; Hydrolase; Phosphohydrolase; NUDIX Domain-Containing Protein; DNA Hydrolase With MutT Domain-Containing Protein; MutT/NUDIX Family DNA Hydrolase; Nudix Hydrolase Family Protein; MutT/Nudix Family DNA Hydrolase; NTP Pyrophosphohydrolase; Hydrolase MutT/Nudix Family Protein; Hydrolase Nudix Family; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDENVDDAAMRILKDRTGTENIY LQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAEHSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLT LREQLNNHPIGYNLLPEKFTMPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL KEGLKGNW
Sequences:
>Translated_248_residues MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDENVDDAAMRILKDRTGTENIY LQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAEHSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLT LREQLNNHPIGYNLLPEKFTMPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL KEGLKGNW >Mature_248_residues MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDENVDDAAMRILKDRTGTENIY LQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAEHSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLT LREQLNNHPIGYNLLPEKFTMPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL KEGLKGNW
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29084; Mature: 29084
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDE CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC NVDDAAMRILKDRTGTENIYLQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAE CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEHHHHHCC HSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLTLREQLNNHPIGYNLLPEKFT CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC MPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEECHHHHHHHHH KEGLKGNW HHHCCCCC >Mature Secondary Structure MELKKLLEQQSAEAWEKYIPSLSIDCVIFSFYENALHVLTVNMKDQNLWGLPGGYVQKDE CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCC NVDDAAMRILKDRTGTENIYLQQFYTFGNLKRSESAFEAYDDSIWNKQRFVSIGYYALAE CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEHHHHHCC HSQVKLRIDQYSNAVEWKLIETLPEFMMDHRAIFDKALLTLREQLNNHPIGYNLLPEKFT CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC MPELQKLYEAILGKKLNRGNFYRKILRYDILIKLDESRKGGAHKAPDLYSFDLTKYNEAL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEECHHHHHHHHH KEGLKGNW HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA