Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301133

Identifier: 146301133

GI number: 146301133

Start: 4051213

End: 4051557

Strand: Direct

Name: 146301133

Synonym: Fjoh_3391

Alternate gene names: NA

Gene position: 4051213-4051557 (Clockwise)

Preceding gene: 146301128

Following gene: 146301135

Centisome position: 66.45

GC content: 30.43

Gene sequence:

>345_bases
ATGCCGCACTTTATAATAGATTGTTCAGAAAATGTAATTCGGTTAAAATCTGCAGATGATATAATGCAGGAAGTTTTTGA
TGCAGCTTTATCAACTGGATTATTTACGGCATCTGAAATTAAAGTACGCATCAATCCTTTTAGCTATTACAACAACGGAA
ATACTCTGGATGATTTTATACACGTTTTTAGTTATATAATGGAAGGCCGAAACGACGATCAAAAAGGGAATTTATCTAAA
GTAATTGTAACAAAACTGAACTCTTTACTTCCACAGGTTCCTGTAATTTCCATCAACATTCAGGATTTTGAAAAATTAAA
TTATTTCAATAAAACAATGATTTAA

Upstream 100 bases:

>100_bases
ACTAAAGTGTAAAATAGAAAAATATCTTTTCTACCACGTATTACAAGTATCGTTTTTCATAATTTTGTTACAATAAAAAT
TTAACCTAAAACTTAAAATT

Downstream 100 bases:

>100_bases
AGCCGATTATTTTCAAAAAAGATATAAGCAAACTTATTTCATATTACAAATGATATAAAAAAGACAATTCCACTTAATTA
TTCTGTTCGAATATCAAGTG

Product: hypothetical protein

Products: 5-carboxy-2-oxohept-3-enedioate

Alternate protein names: 5-Carboxymethyl-2-Hydroxymuconate Isomerase; 5-Carboxymethyl-2-Hydroxymuconate D-Isomerase; 5-Carboxymethyl-2-Hydroxymuconate Isomerase-Like Protein; Muconate Delta-Isomerase

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MPHFIIDCSENVIRLKSADDIMQEVFDAALSTGLFTASEIKVRINPFSYYNNGNTLDDFIHVFSYIMEGRNDDQKGNLSK
VIVTKLNSLLPQVPVISINIQDFEKLNYFNKTMI

Sequences:

>Translated_114_residues
MPHFIIDCSENVIRLKSADDIMQEVFDAALSTGLFTASEIKVRINPFSYYNNGNTLDDFIHVFSYIMEGRNDDQKGNLSK
VIVTKLNSLLPQVPVISINIQDFEKLNYFNKTMI
>Mature_113_residues
PHFIIDCSENVIRLKSADDIMQEVFDAALSTGLFTASEIKVRINPFSYYNNGNTLDDFIHVFSYIMEGRNDDQKGNLSKV
IVTKLNSLLPQVPVISINIQDFEKLNYFNKTMI

Specific function: Unknown

COG id: COG3232

COG function: function code E; 5-carboxymethyl-2-hydroxymuconate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.3.3.10

Molecular weight: Translated: 13038; Mature: 12907

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHFIIDCSENVIRLKSADDIMQEVFDAALSTGLFTASEIKVRINPFSYYNNGNTLDDFI
CCCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEECCCCCHHHHH
HVFSYIMEGRNDDQKGNLSKVIVTKLNSLLPQVPVISINIQDFEKLNYFNKTMI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PHFIIDCSENVIRLKSADDIMQEVFDAALSTGLFTASEIKVRINPFSYYNNGNTLDDFI
CCEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEECCCCCHHHHH
HVFSYIMEGRNDDQKGNLSKVIVTKLNSLLPQVPVISINIQDFEKLNYFNKTMI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-carboxymethyl-2-hydroxymuconate

Specific reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA