Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301041

Identifier: 146301041

GI number: 146301041

Start: 3940410

End: 3941900

Strand: Direct

Name: 146301041

Synonym: Fjoh_3297

Alternate gene names: NA

Gene position: 3940410-3941900 (Clockwise)

Preceding gene: 146301040

Following gene: 146301042

Centisome position: 64.63

GC content: 35.41

Gene sequence:

>1491_bases
ATGATAAAATACAGCCCACAAAATTACTTTAAATGCCTGTTTTTTTTATTTCTTTTGATTTCATTTTCAGGACATTCTCA
AATCGGAATTGGAACTGTAACACCTAATGCAAGTTCTGTTCTAGACATTACATCGACTACTCAGGGAATGCTTACACCCC
GAATGACTACTGCTCAAAGAAATGCTGTCGCATCACCTGCAGATGGTTTATTAGTTTATGATACAGATCTAAAAGCTTTT
CATTTCTACTCTGGAGCAACATCTACATGGATTAGTATTACTAGTGGCGTTAATCCAAGACTAAATTTTAAGCGTATTAG
AAGCACCGACAATCTTGCCGTAGTTTTAGCTGCAGAACTTGCAGCTGGCGGAGGATCAAAATATCTTTTAAACACCAACA
CTCTTTATGAAATTAACGGAACAGTTTCTTTTAATTTCCCTATTGATTTAAATAATGCCTATATACAAGGCCTTGACCCA
AATGAAGATGTTTTGTTTCGACCTACAGGAAACCTTTTTGAAGGTGCAACAGGCGGCGGTATTAAAAGTGTTACATTACG
TGCGGCTACGGGAAGTGTTTTTAACCTGAATGCTTCAGCAACAGAAAATTTGATTTTTAGAGATTCTGTTGTTGCAAATT
CTGCAAACGTAGGGACTATATCGGGTTTTGGATTGGTCTTTCTTAGTATTGTTCAGTATACCGGAAATACAAATGGTGTA
ACCTATAATAATATTTCACAATTACTGCTTAGTAACACAGGTTGGCTAAACAACAATAATGGAACTTATGAAAAGTTTAC
AGGAACTTTTACACTTATTGAAAAACAAGGAGGTTTTAGTCAGGTAGATGGAACTGCTATAGGGTTTGATGTTTCTACAT
CAGGACTTACTATAACTGGTGATGCTGTATTAGAATCGGTAGTTTTTACAGGATCAAACACAGCTGGTTATGTTAAGGGA
TATACAACAGGATCTTTTACCGGATATAATTTTAATAACAGCTGGAATGTGCGATCTGCCGGAATTCCAACTGAAACTGA
TGCAAATGCAGTTGGAGATTTTTCAATGGATTATGCTGTTGGAACTGGTCTTGCAGTGAGTTTTAATTCTTCGAATCCAA
GTAATATTGTGAAAATTGGAGCAACCGGAACACCTTCTACAACTTATTCTAATTTATTTAGGTTTTCAACCGATGCGGCA
AACAGACTTCGATATGTAGGGAAAAAGAAAAGGATTTTTCAAATTACAGGATCAATTTCTTTTCAGGTACCAGGGTTAGC
TACTCATATAATTTATATAGCCAAAAATGGAACAGTTATAAGCCAGTATAAAATTTATGGAAGAGGCCAGGCTTTAAATG
ATATTGTCGTTTTACCATTAAATGCTACAACCGAGTTAGTAAACAATGATTACATTGAAGTTTTTGCCCAAAGATTTTCT
GGCACAACTGGAGATATTGTAGTTCCTAATATGGCCATTACAATTAAATAA

Upstream 100 bases:

>100_bases
ACGAAAAAATATCCCAAAAAGTAATTATTTCAAATTCCCGAAATTAATTTAAATCATCTCTAAAGACTATAACGACTCAA
ATAAACTAATACCAAAAATT

Downstream 100 bases:

>100_bases
TTCATCTTCTTTTACAAAATAAAAAACACTTCAAAAAGCATTAAGTTTTTTGAAGTGTTTTTTTATTTTCGATTAATGCA
TTTCATGCATTACTTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQRNAVASPADGLLVYDTDLKAF
HFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAELAAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDP
NEDVLFRPTGNLFEGATGGGIKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV
TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITGDAVLESVVFTGSNTAGYVKG
YTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAVGTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAA
NRLRYVGKKKRIFQITGSISFQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS
GTTGDIVVPNMAITIK

Sequences:

>Translated_496_residues
MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQRNAVASPADGLLVYDTDLKAF
HFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAELAAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDP
NEDVLFRPTGNLFEGATGGGIKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV
TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITGDAVLESVVFTGSNTAGYVKG
YTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAVGTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAA
NRLRYVGKKKRIFQITGSISFQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS
GTTGDIVVPNMAITIK
>Mature_496_residues
MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQRNAVASPADGLLVYDTDLKAF
HFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAELAAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDP
NEDVLFRPTGNLFEGATGGGIKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV
TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITGDAVLESVVFTGSNTAGYVKG
YTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAVGTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAA
NRLRYVGKKKRIFQITGSISFQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS
GTTGDIVVPNMAITIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52949; Mature: 52949

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQR
CCEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHC
NAVASPADGLLVYDTDLKAFHFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAEL
CCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEEEH
AAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDPNEDVLFRPTGNLFEGATGGG
HCCCCCEEEEECCEEEEEECEEEEEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCC
IKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV
EEEEEEEEECCCEEEECCCCCCCEEEECEEEECCCCCCEECHHHHHHHHHHHHCCCCCCE
TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITG
EHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEH
DAVLESVVFTGSNTAGYVKGYTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAV
HHHEEEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEECCCCCCCCCCCCCCCEECEEE
GTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAANRLRYVGKKKRIFQITGSIS
CCCEEEEECCCCCCCEEEEECCCCCCCCHHHHEEEECCHHHHHHHCCCCCEEEEEECEEE
FQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS
EECCCCEEEEEEEEECCEEEEEEEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHC
GTTGDIVVPNMAITIK
CCCCCEEECCEEEEEC
>Mature Secondary Structure
MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQR
CCEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHC
NAVASPADGLLVYDTDLKAFHFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAEL
CCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEEEH
AAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDPNEDVLFRPTGNLFEGATGGG
HCCCCCEEEEECCEEEEEECEEEEEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCC
IKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV
EEEEEEEEECCCEEEECCCCCCCEEEECEEEECCCCCCEECHHHHHHHHHHHHCCCCCCE
TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITG
EHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEH
DAVLESVVFTGSNTAGYVKGYTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAV
HHHEEEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEECCCCCCCCCCCCCCCEECEEE
GTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAANRLRYVGKKKRIFQITGSIS
CCCEEEEECCCCCCCEEEEECCCCCCCCHHHHEEEECCHHHHHHHCCCCCEEEEEECEEE
FQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS
EECCCCEEEEEEEEECCEEEEEEEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHC
GTTGDIVVPNMAITIK
CCCCCEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA