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The map label for this gene is ykoG [H]

Identifier: 146300629

GI number: 146300629

Start: 3417713

End: 3418375

Strand: Reverse

Name: ykoG [H]

Synonym: Fjoh_2880

Alternate gene names: 146300629

Gene position: 3418375-3417713 (Counterclockwise)

Preceding gene: 146300631

Following gene: 146300628

Centisome position: 56.07

GC content: 32.73

Gene sequence:

>663_bases
ATGCATATTTTAATTGTTGAAGATGAGCTTGGAATTGTTCAGTTTTTAGAACAGGGACTTCGTGAAGAAGGATACCAGAT
TACTACCGCCAATGATGGATCTAAAGGTTTTGAATTAACTCAAAATCACACATTCGATTTGATTTTATTAGATTGGATGC
TGCCAAAAATTAATGGACTCGATTTGTGCAAAGCCATAAGAATTAAGGATAAAAAAACTCCCATTATTTTTTTAACTGCA
AAAGACACCGTTCAGGAAACCATTGAAGGGCTGCGTGCGGGAGCAAATGACTACATAAAAAAGCCATTTAGTTTTGAAGA
ATTGGTCGAAAGAGTCAAAATTCATTTTAGAAATAAGGCTACAGATGAAATACTTACGCTCGGCAACATTACAGTTGATC
TTTCTAAGCATATCGTTTTAAAAAATGATGAAGAAATCAATCTAACGCAAAGAGAATTTGAATTACTGACGTATTTAATT
AGAAAAAAAGGCAAAGTCTGTACCCGAAACGAGATTCTAAAAGATGTCTGGGATATTAATTTTGAATATGATACCGGAGT
AATTGATGTTTTTATGAATGCTATTCGTAAAAAACTGAACCTTAAAATTGAAGAAGATTACATTAAAACTATTCGGGGCA
TTGGTTATATCGCCAATGATTAA

Upstream 100 bases:

>100_bases
AATTCAGATATTACTCTCATGGTTTTAAAGGTTTTTTGACCTGTAAAATAGCTATCTTTGAAAATCGTAAAAATAAATTA
ACCTTGAATCAAAGTTTAAC

Downstream 100 bases:

>100_bases
GCAAAATGAAATTATTATCTTTTAAAAATAGAATTGCATTAAACTATATCGTAGGAACAGGACTTTTGGTTCTGGCAGTT
TTTTCGGCTATTTATTTTAT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MHILIVEDELGIVQFLEQGLREEGYQITTANDGSKGFELTQNHTFDLILLDWMLPKINGLDLCKAIRIKDKKTPIIFLTA
KDTVQETIEGLRAGANDYIKKPFSFEELVERVKIHFRNKATDEILTLGNITVDLSKHIVLKNDEEINLTQREFELLTYLI
RKKGKVCTRNEILKDVWDINFEYDTGVIDVFMNAIRKKLNLKIEEDYIKTIRGIGYIAND

Sequences:

>Translated_220_residues
MHILIVEDELGIVQFLEQGLREEGYQITTANDGSKGFELTQNHTFDLILLDWMLPKINGLDLCKAIRIKDKKTPIIFLTA
KDTVQETIEGLRAGANDYIKKPFSFEELVERVKIHFRNKATDEILTLGNITVDLSKHIVLKNDEEINLTQREFELLTYLI
RKKGKVCTRNEILKDVWDINFEYDTGVIDVFMNAIRKKLNLKIEEDYIKTIRGIGYIAND
>Mature_220_residues
MHILIVEDELGIVQFLEQGLREEGYQITTANDGSKGFELTQNHTFDLILLDWMLPKINGLDLCKAIRIKDKKTPIIFLTA
KDTVQETIEGLRAGANDYIKKPFSFEELVERVKIHFRNKATDEILTLGNITVDLSKHIVLKNDEEINLTQREFELLTYLI
RKKGKVCTRNEILKDVWDINFEYDTGVIDVFMNAIRKKLNLKIEEDYIKTIRGIGYIAND

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=39.0909090909091, Blast_Score=173, Evalue=8e-45,
Organism=Escherichia coli, GI87082012, Length=217, Percent_Identity=39.1705069124424, Blast_Score=167, Evalue=5e-43,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=32.4200913242009, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1786599, Length=219, Percent_Identity=32.4200913242009, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=32.8767123287671, Blast_Score=124, Evalue=3e-30,
Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=34.3612334801762, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=29.6943231441048, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=35.4545454545455, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=30, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=32.8888888888889, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=29.3103448275862, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=31.4159292035398, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=30, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=34.9056603773585, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790437, Length=106, Percent_Identity=33.0188679245283, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1790299, Length=135, Percent_Identity=30.3703703703704, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=33.6633663366337, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=107, Percent_Identity=31.7757009345794, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25490; Mature: 25490

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILIVEDELGIVQFLEQGLREEGYQITTANDGSKGFELTQNHTFDLILLDWMLPKINGL
CEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCCEEEEEEEHHCCCCCCH
DLCKAIRIKDKKTPIIFLTAKDTVQETIEGLRAGANDYIKKPFSFEELVERVKIHFRNKA
HHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCC
TDEILTLGNITVDLSKHIVLKNDEEINLTQREFELLTYLIRKKGKVCTRNEILKDVWDIN
CHHEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
FEYDTGVIDVFMNAIRKKLNLKIEEDYIKTIRGIGYIAND
CEECCCHHHHHHHHHHHHHCCEEHHHHHHHHHHCCEECCC
>Mature Secondary Structure
MHILIVEDELGIVQFLEQGLREEGYQITTANDGSKGFELTQNHTFDLILLDWMLPKINGL
CEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCCEEEEEEEHHCCCCCCH
DLCKAIRIKDKKTPIIFLTAKDTVQETIEGLRAGANDYIKKPFSFEELVERVKIHFRNKA
HHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCC
TDEILTLGNITVDLSKHIVLKNDEEINLTQREFELLTYLIRKKGKVCTRNEILKDVWDIN
CHHEEEECCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
FEYDTGVIDVFMNAIRKKLNLKIEEDYIKTIRGIGYIAND
CEECCCHHHHHHHHHHHHHCCEEHHHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]